FFCP PHASE1:Hg19::chr14:104121095..104121106,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3831|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=6387|TSSclassifier=W|UniProt=B5BU63|association_with_transcript=181bp_to_AB451299,AB451431_5end|description=CAGE_peak_9_at_KLC1_5end|id=chr14:104121095..104121106,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000317;6.14e-08;2!CL:1000448;6.14e-08;2!CL:0002308;6.14e-08;2!CL:0002140;6.14e-08;2|ontology_enrichment_celltype_v019_2=CL:0000317,6.15e-08,2;CL:1000448,6.15e-08,2;CL:0002308,6.15e-08,2;CL:0002140,6.15e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;1.36e-18;3!DOID:127;1.36e-18;3!DOID:0060072;3.37e-14;4|ontology_enrichment_disease_v019_2=DOID:0060084,1.62e-18,3;DOID:127,1.62e-18,3;DOID:0060072,3.85e-14,4|ontology_enrichment_uberon=UBERON:0001049!5.29e-12!57;UBERON:0005068!5.29e-12!57;UBERON:0006241!5.29e-12!57;UBERON:0007135!5.29e-12!57;UBERON:0001893!2.20e-11!34;UBERON:0002020!5.65e-11!34;UBERON:0003528!5.65e-11!34;UBERON:0002791!5.69e-11!33;UBERON:0002780!5.91e-11!41;UBERON:0001890!5.91e-11!41;UBERON:0006240!5.91e-11!41;UBERON:0001869!6.82e-11!32;UBERON:0003080!1.95e-10!42;UBERON:0002616!2.59e-10!59;UBERON:0001017!7.38e-10!82;UBERON:0005743!9.92e-10!86;UBERON:0000955!1.26e-09!69;UBERON:0006238!1.26e-09!69;UBERON:0000956!4.25e-09!25;UBERON:0000203!4.25e-09!25;UBERON:0002619!6.58e-09!22;UBERON:0001950!7.27e-09!20;UBERON:0000073!3.01e-08!94;UBERON:0001016!3.01e-08!94;UBERON:0003075!1.93e-07!86;UBERON:0007284!1.93e-07!86;UBERON:0002346!2.46e-07!90;UBERON:0001871!4.92e-07!7;UBERON:0007023!6.32e-07!115|ontology_enrichment_uberon_v019=UBERON:0001871;8.52e-18;6!UBERON:0001950;1.94e-10;20!UBERON:0002619;1.49e-09;22!UBERON:0000956;1.78e-08;25!UBERON:0000203;1.78e-08;25!UBERON:0002771;3.68e-08;2!UBERON:0000341;6.14e-08;2!UBERON:0001876;6.14e-08;2!UBERON:0002419;6.14e-08;2!UBERON:0007771;6.14e-08;2!UBERON:0003297;6.14e-08;2!UBERON:0001821;6.14e-08;2!UBERON:0003487;6.14e-08;2!UBERON:0001820;6.14e-08;2!UBERON:0002791;6.92e-07;32!UBERON:0001869;6.92e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0001871,7.84e-18,6;UBERON:0001950,1.91e-10,20;UBERON:0002619,1.48e-09,22;UBERON:0000956,1.77e-08,25;UBERON:0000203,1.77e-08,25;UBERON:0002771,3.56e-08,2;UBERON:0001876,4.38e-08,2;UBERON:0000341,5.37e-08,2;UBERON:0002419,6.15e-08,2;UBERON:0007771,6.15e-08,2;UBERON:0003297,6.15e-08,2;UBERON:0001821,6.15e-08,2;UBERON:0003487,6.15e-08,2;UBERON:0001820,6.15e-08,2;UBERON:0005089,6.15e-08,2;UBERON:0005088,6.15e-08,2|phase1_expression=0.363356758541113,0.428201047781966,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0.286235987131057,0.273748850145768,0,0.0764134057479513,0.246301768349837,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.290796477559129,0,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0,0,0,0.376484679085209,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0.870627715885752,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,0,0,0.132957960518865,0.476981248610684,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0,0.516833518338658,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0.612975591598039,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0.310983165046111,0.252320850875628,0.36497735907583,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0.308482478109971,0,0,0,0.43596006883328,0.22001485746285,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.602878754119172,0,0.199945982364114,1.2162378064119,0,0,0,0,0,0.579125226670317,0,0,0,0,0.646882724578552,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,1.60586089917446,0,0.117141414992713,0,2.27407504055985,0,0,0,0.434418072340414,0,0,0,0.215714200818617,0,0,0,0.30239029332968,0.248107807818777,0.61384789315225,0.280660094433074,0.384417447767103,0,0.160853921143607,0,0.308419387605311,0,0,0,0.11621037845995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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3831 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6387 | |||
|TSSclassifier=W | |||
|UniProt=B5BU63 | |||
|association_with_transcript=181bp_to_AB451299,AB451431_5end | |||
|description=CAGE_peak_9_at_KLC1_5end | |||
|id=chr14:104121095..104121106,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000317;6.14e-08;2!CL:1000448;6.14e-08;2!CL:0002308;6.14e-08;2!CL:0002140;6.14e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,6.15e-08,2;CL:1000448,6.15e-08,2;CL:0002308,6.15e-08,2;CL:0002140,6.15e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.36e-18;3!DOID:127;1.36e-18;3!DOID:0060072;3.37e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.62e-18,3;DOID:127,1.62e-18,3;DOID:0060072,3.85e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.29e-12!57;UBERON:0005068!5.29e-12!57;UBERON:0006241!5.29e-12!57;UBERON:0007135!5.29e-12!57;UBERON:0001893!2.20e-11!34;UBERON:0002020!5.65e-11!34;UBERON:0003528!5.65e-11!34;UBERON:0002791!5.69e-11!33;UBERON:0002780!5.91e-11!41;UBERON:0001890!5.91e-11!41;UBERON:0006240!5.91e-11!41;UBERON:0001869!6.82e-11!32;UBERON:0003080!1.95e-10!42;UBERON:0002616!2.59e-10!59;UBERON:0001017!7.38e-10!82;UBERON:0005743!9.92e-10!86;UBERON:0000955!1.26e-09!69;UBERON:0006238!1.26e-09!69;UBERON:0000956!4.25e-09!25;UBERON:0000203!4.25e-09!25;UBERON:0002619!6.58e-09!22;UBERON:0001950!7.27e-09!20;UBERON:0000073!3.01e-08!94;UBERON:0001016!3.01e-08!94;UBERON:0003075!1.93e-07!86;UBERON:0007284!1.93e-07!86;UBERON:0002346!2.46e-07!90;UBERON:0001871!4.92e-07!7;UBERON:0007023!6.32e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;8.52e-18;6!UBERON:0001950;1.94e-10;20!UBERON:0002619;1.49e-09;22!UBERON:0000956;1.78e-08;25!UBERON:0000203;1.78e-08;25!UBERON:0002771;3.68e-08;2!UBERON:0000341;6.14e-08;2!UBERON:0001876;6.14e-08;2!UBERON:0002419;6.14e-08;2!UBERON:0007771;6.14e-08;2!UBERON:0003297;6.14e-08;2!UBERON:0001821;6.14e-08;2!UBERON:0003487;6.14e-08;2!UBERON:0001820;6.14e-08;2!UBERON:0002791;6.92e-07;32!UBERON:0001869;6.92e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,7.84e-18,6;UBERON:0001950,1.91e-10,20;UBERON:0002619,1.48e-09,22;UBERON:0000956,1.77e-08,25;UBERON:0000203,1.77e-08,25;UBERON:0002771,3.56e-08,2;UBERON:0001876,4.38e-08,2;UBERON:0000341,5.37e-08,2;UBERON:0002419,6.15e-08,2;UBERON:0007771,6.15e-08,2;UBERON:0003297,6.15e-08,2;UBERON:0001821,6.15e-08,2;UBERON:0003487,6.15e-08,2;UBERON:0001820,6.15e-08,2;UBERON:0005089,6.15e-08,2;UBERON:0005088,6.15e-08,2 | |||
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| |||
|short_description=p9@KLC1 | |||
}} |
Revision as of 03:25, 11 September 2013
Short description: | p9@KLC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_KLC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 181bp_to_AB451299, AB451431_5end |
EntrezGene: | KLC1 |
HGNC: | 6387 |
UniProt: | B5BU63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 6.15e-08 | 2 |
epithelial cell of sweat gland | 6.15e-08 | 2 |
epithelial cell of skin gland | 6.15e-08 | 2 |
acinar cell of sebaceous gland | 6.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
temporal lobe | 7.84e-18 | 6 |
neocortex | 1.91e-10 | 20 |
regional part of cerebral cortex | 1.48e-09 | 22 |
cerebral cortex | 1.77e-08 | 25 |
pallium | 1.77e-08 | 25 |
middle temporal gyrus | 3.56e-08 | 2 |
amygdala | 4.38e-08 | 2 |
throat | 5.37e-08 | 2 |
skin gland | 6.15e-08 | 2 |
epidermis gland | 6.15e-08 | 2 |
gland of integumental system | 6.15e-08 | 2 |
sebaceous gland | 6.15e-08 | 2 |
skin sebaceous gland | 6.15e-08 | 2 |
sweat gland | 6.15e-08 | 2 |
sweat gland placode | 6.15e-08 | 2 |
sebaceous gland placode | 6.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.62e-18 | 3 |
leiomyoma | 1.62e-18 | 3 |
benign neoplasm | 3.85e-14 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.