FFCP PHASE1:Hg19::chr14:36989913..36989931,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7080|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11825|TSSclassifier=S|UniProt=F8VVG2|association_with_transcript=222bp_to_ENST00000546983_5end|coexpression_cluster_id=C3426|description=CAGE_peak_6_at_NKX2-1_5end|id=chr14:36989913..36989931,-|ontology_enrichment_celltype=CL:0000082!1.48e-07!19;CL:0002076!9.67e-07!43|ontology_enrichment_celltype_v019=CL:0000167;7.28e-09;1!CL:0000164;7.28e-09;1!CL:0000502;7.28e-09;1!CL:0000172;7.28e-09;1!CL:0000173;7.28e-09;1!CL:0002553;2.74e-08;1|ontology_enrichment_celltype_v019_2=CL:0000167,7.01e-09,1;CL:0000164,7.01e-09,1;CL:0000502,7.01e-09,1;CL:0000172,7.01e-09,1;CL:0000173,7.01e-09,1;CL:0002351,7.01e-09,1;CL:0002553,2.29e-08,1|ontology_enrichment_development_v019=UBERON:0007123;1.16e-13;5!UBERON:0008947;1.38e-11;29!UBERON:0001041;3.58e-11;30!CL:0002351;7.28e-09;1|ontology_enrichment_disease=DOID:1749!1.24e-12!14;DOID:305!8.36e-11!106;DOID:0050615!2.60e-09!16;DOID:162!1.89e-08!235;DOID:0050687!2.04e-08!143;DOID:14566!4.55e-08!239;DOID:1324!1.17e-07!15;DOID:3905!3.78e-07!9|ontology_enrichment_disease_v019=DOID:0050615;3.43e-11;16!DOID:4430;7.28e-09;1!DOID:3151;1.47e-08;1!DOID:3112;1.47e-08;1!DOID:3149;1.47e-08;1!DOID:0050619;2.74e-08;1!DOID:1357;2.74e-08;1!DOID:3905;5.14e-08;9!DOID:1324;5.25e-08;15!DOID:3908;6.77e-07;5|ontology_enrichment_disease_v019_2=DOID:0050615,2.79e-11,16;DOID:4430,7.01e-09,1;DOID:3112,1.37e-08,1;DOID:3151,1.71e-08,1;DOID:3149,1.71e-08,1;DOID:0050619,1.98e-08,1;DOID:1357,1.98e-08,1;DOID:1324,4.79e-08,15;DOID:3905,4.85e-08,9;DOID:3908,6.30e-07,5|ontology_enrichment_uberon=UBERON:0000065!2.35e-15!53;UBERON:0001004!1.29e-13!72;UBERON:0008947!3.17e-13!38;UBERON:0003258!3.17e-13!38;UBERON:0002048!1.83e-12!22;UBERON:0000117!1.83e-12!22;UBERON:0000171!1.83e-12!22;UBERON:0000170!1.83e-12!22;UBERON:0005597!1.83e-12!22;UBERON:0000118!1.83e-12!22;UBERON:0005178!4.95e-10!34;UBERON:0002224!4.95e-10!34;UBERON:0005181!1.18e-09!35;UBERON:0002046!4.43e-09!5;UBERON:0004117!4.43e-09!5;UBERON:0007689!4.43e-09!5;UBERON:0007123!4.43e-09!5;UBERON:0003091!4.43e-09!5;UBERON:0004119!6.78e-09!169;UBERON:0000925!6.78e-09!169;UBERON:0006595!6.78e-09!169;UBERON:0005383!2.57e-08!3;UBERON:0005382!2.57e-08!3;UBERON:0005153!9.05e-08!37;UBERON:0004802!1.48e-07!19;UBERON:0000115!1.48e-07!19;UBERON:0001007!1.98e-07!155;UBERON:0001555!1.98e-07!155;UBERON:0007026!1.98e-07!155;UBERON:0000072!3.03e-07!46;UBERON:0005911!8.23e-07!82|ontology_enrichment_uberon_v019=UBERON:0002048;1.55e-15;22!UBERON:0000117;1.55e-15;22!UBERON:0000171;1.55e-15;22!UBERON:0000170;1.55e-15;22!UBERON:0002046;1.16e-13;5!UBERON:0002171;7.28e-09;1!UBERON:0006518;7.28e-09;1!UBERON:0008949;7.28e-09;1!UBERON:0000101;7.28e-09;1!UBERON:0002167;7.28e-09;1!UBERON:0005178;1.91e-08;34!UBERON:0002224;1.91e-08;34!UBERON:0001764;2.74e-08;1!UBERON:0001825;2.74e-08;1!UBERON:0005181;1.10e-07;35|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.41e-15,22;UBERON:0000117,1.41e-15,22;UBERON:0000171,1.41e-15,22;UBERON:0000170,1.41e-15,22;UBERON:0005597,1.41e-15,22;UBERON:0000118,1.41e-15,22;UBERON:0002046,1.17e-13,5;UBERON:0004117,1.17e-13,5;UBERON:0007689,1.17e-13,5;UBERON:0007123,1.17e-13,5;UBERON:0003091,1.17e-13,5;UBERON:0005153,1.34e-11,37;UBERON:0005911,1.38e-10,82;UBERON:0005178,8.72e-10,34;UBERON:0002224,8.72e-10,34;UBERON:0005181,1.75e-09,35;UBERON:0005157,6.87e-09,47;UBERON:0002171,7.56e-09,1;UBERON:0006518,7.56e-09,1;UBERON:0008949,7.56e-09,1;UBERON:0000101,7.56e-09,1;UBERON:0002167,7.56e-09,1;UBERON:0008947,1.15e-08,38;UBERON:0003258,1.15e-08,38;UBERON:0001764,1.98e-08,1;UBERON:0001825,1.98e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0.915694648183434,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.960950336825531,0.638063562472921,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3451449982717,0,0,0,6.23838963263144,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7080 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11825 | |||
|TSSclassifier=S | |||
|UniProt=F8VVG2 | |||
|association_with_transcript=222bp_to_ENST00000546983_5end | |||
|coexpression_cluster_id=C3426 | |||
|description=CAGE_peak_6_at_NKX2-1_5end | |||
|id=chr14:36989913..36989931,- | |||
|ontology_enrichment_celltype=CL:0000082!1.48e-07!19;CL:0002076!9.67e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000167;7.28e-09;1!CL:0000164;7.28e-09;1!CL:0000502;7.28e-09;1!CL:0000172;7.28e-09;1!CL:0000173;7.28e-09;1!CL:0002553;2.74e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,7.01e-09,1;CL:0000164,7.01e-09,1;CL:0000502,7.01e-09,1;CL:0000172,7.01e-09,1;CL:0000173,7.01e-09,1;CL:0002351,7.01e-09,1;CL:0002553,2.29e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.16e-13;5!UBERON:0008947;1.38e-11;29!UBERON:0001041;3.58e-11;30!CL:0002351;7.28e-09;1 | |||
|ontology_enrichment_disease=DOID:1749!1.24e-12!14;DOID:305!8.36e-11!106;DOID:0050615!2.60e-09!16;DOID:162!1.89e-08!235;DOID:0050687!2.04e-08!143;DOID:14566!4.55e-08!239;DOID:1324!1.17e-07!15;DOID:3905!3.78e-07!9 | |||
|ontology_enrichment_disease_v019=DOID:0050615;3.43e-11;16!DOID:4430;7.28e-09;1!DOID:3151;1.47e-08;1!DOID:3112;1.47e-08;1!DOID:3149;1.47e-08;1!DOID:0050619;2.74e-08;1!DOID:1357;2.74e-08;1!DOID:3905;5.14e-08;9!DOID:1324;5.25e-08;15!DOID:3908;6.77e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,2.79e-11,16;DOID:4430,7.01e-09,1;DOID:3112,1.37e-08,1;DOID:3151,1.71e-08,1;DOID:3149,1.71e-08,1;DOID:0050619,1.98e-08,1;DOID:1357,1.98e-08,1;DOID:1324,4.79e-08,15;DOID:3905,4.85e-08,9;DOID:3908,6.30e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000065!2.35e-15!53;UBERON:0001004!1.29e-13!72;UBERON:0008947!3.17e-13!38;UBERON:0003258!3.17e-13!38;UBERON:0002048!1.83e-12!22;UBERON:0000117!1.83e-12!22;UBERON:0000171!1.83e-12!22;UBERON:0000170!1.83e-12!22;UBERON:0005597!1.83e-12!22;UBERON:0000118!1.83e-12!22;UBERON:0005178!4.95e-10!34;UBERON:0002224!4.95e-10!34;UBERON:0005181!1.18e-09!35;UBERON:0002046!4.43e-09!5;UBERON:0004117!4.43e-09!5;UBERON:0007689!4.43e-09!5;UBERON:0007123!4.43e-09!5;UBERON:0003091!4.43e-09!5;UBERON:0004119!6.78e-09!169;UBERON:0000925!6.78e-09!169;UBERON:0006595!6.78e-09!169;UBERON:0005383!2.57e-08!3;UBERON:0005382!2.57e-08!3;UBERON:0005153!9.05e-08!37;UBERON:0004802!1.48e-07!19;UBERON:0000115!1.48e-07!19;UBERON:0001007!1.98e-07!155;UBERON:0001555!1.98e-07!155;UBERON:0007026!1.98e-07!155;UBERON:0000072!3.03e-07!46;UBERON:0005911!8.23e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002048;1.55e-15;22!UBERON:0000117;1.55e-15;22!UBERON:0000171;1.55e-15;22!UBERON:0000170;1.55e-15;22!UBERON:0002046;1.16e-13;5!UBERON:0002171;7.28e-09;1!UBERON:0006518;7.28e-09;1!UBERON:0008949;7.28e-09;1!UBERON:0000101;7.28e-09;1!UBERON:0002167;7.28e-09;1!UBERON:0005178;1.91e-08;34!UBERON:0002224;1.91e-08;34!UBERON:0001764;2.74e-08;1!UBERON:0001825;2.74e-08;1!UBERON:0005181;1.10e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.41e-15,22;UBERON:0000117,1.41e-15,22;UBERON:0000171,1.41e-15,22;UBERON:0000170,1.41e-15,22;UBERON:0005597,1.41e-15,22;UBERON:0000118,1.41e-15,22;UBERON:0002046,1.17e-13,5;UBERON:0004117,1.17e-13,5;UBERON:0007689,1.17e-13,5;UBERON:0007123,1.17e-13,5;UBERON:0003091,1.17e-13,5;UBERON:0005153,1.34e-11,37;UBERON:0005911,1.38e-10,82;UBERON:0005178,8.72e-10,34;UBERON:0002224,8.72e-10,34;UBERON:0005181,1.75e-09,35;UBERON:0005157,6.87e-09,47;UBERON:0002171,7.56e-09,1;UBERON:0006518,7.56e-09,1;UBERON:0008949,7.56e-09,1;UBERON:0000101,7.56e-09,1;UBERON:0002167,7.56e-09,1;UBERON:0008947,1.15e-08,38;UBERON:0003258,1.15e-08,38;UBERON:0001764,1.98e-08,1;UBERON:0001825,1.98e-08,1 | |||
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|short_description=p6@NKX2-1 | |||
}} |
Revision as of 04:28, 11 September 2013
Short description: | p6@NKX2-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_NKX2-1_5end |
Coexpression cluster: | C3426_bronchioalveolar_anaplastic_astrocytoma_small_somatostatinoma_large_prostate |
Association with transcript: | 222bp_to_ENST00000546983_5end |
EntrezGene: | NKX2-1 |
HGNC: | 11825 |
UniProt: | F8VVG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 7.01e-09 | 1 |
enteroendocrine cell | 7.01e-09 | 1 |
type D enteroendocrine cell | 7.01e-09 | 1 |
somatostatin secreting cell | 7.01e-09 | 1 |
pancreatic D cell | 7.01e-09 | 1 |
progenitor cell of endocrine pancreas | 7.01e-09 | 1 |
lung fibroblast | 2.29e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lung | 1.41e-15 | 22 |
respiratory tube | 1.41e-15 | 22 |
respiration organ | 1.41e-15 | 22 |
pair of lungs | 1.41e-15 | 22 |
lung primordium | 1.41e-15 | 22 |
lung bud | 1.41e-15 | 22 |
thyroid gland | 1.17e-13 | 5 |
pharyngeal pouch | 1.17e-13 | 5 |
thyroid diverticulum | 1.17e-13 | 5 |
pharyngeal pouch 2 | 1.17e-13 | 5 |
thyroid primordium | 1.17e-13 | 5 |
epithelial bud | 1.34e-11 | 37 |
endo-epithelium | 1.38e-10 | 82 |
thoracic cavity element | 8.72e-10 | 34 |
thoracic cavity | 8.72e-10 | 34 |
thoracic segment organ | 1.75e-09 | 35 |
epithelial fold | 6.87e-09 | 47 |
lower lobe of right lung | 7.56e-09 | 1 |
right lung lobe | 7.56e-09 | 1 |
lower lobe of lung | 7.56e-09 | 1 |
lobe of lung | 7.56e-09 | 1 |
right lung | 7.56e-09 | 1 |
respiratory primordium | 1.15e-08 | 38 |
endoderm of foregut | 1.15e-08 | 38 |
maxillary sinus | 1.98e-08 | 1 |
paranasal sinus | 1.98e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 2.79e-11 | 16 |
somatostatinoma | 7.01e-09 | 1 |
papillary adenocarcinoma | 1.37e-08 | 1 |
skin squamous cell carcinoma | 1.71e-08 | 1 |
keratoacanthoma | 1.71e-08 | 1 |
paranasal sinus cancer | 1.98e-08 | 1 |
maxillary sinus cancer | 1.98e-08 | 1 |
lung cancer | 4.79e-08 | 15 |
lung carcinoma | 4.85e-08 | 9 |
non-small cell lung carcinoma | 6.30e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.