FFCP PHASE1:Hg19::chr15:25219499..25219545,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6638|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=11164|TSSclassifier=S|UniProt=P63162|association_with_transcript=31bp_to_BC000611_5end|coexpression_cluster_id=C130|description=CAGE_peak_7_at_SNRPN_5end|id=chr15:25219499..25219545,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002322;9.47e-13;5!CL:0000540;6.42e-11;6!CL:0000404;6.42e-11;6!CL:0002231;1.38e-07;3|ontology_enrichment_celltype_v019_2=CL:0002322,7.13e-13,5;CL:0000540,5.38e-11,6;CL:0000031,5.38e-11,6;CL:0000404,5.38e-11,6;CL:0000047,4.04e-08,8;CL:0002231,5.28e-07,3|ontology_enrichment_development_v019=CL:0000031;6.42e-11;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.13e-18!115;UBERON:0001049!1.14e-15!57;UBERON:0005068!1.14e-15!57;UBERON:0006241!1.14e-15!57;UBERON:0007135!1.14e-15!57;UBERON:0002346!3.01e-15!90;UBERON:0003075!5.58e-15!86;UBERON:0007284!5.58e-15!86;UBERON:0005743!1.50e-14!86;UBERON:0002020!5.90e-14!34;UBERON:0003528!5.90e-14!34;UBERON:0001017!6.83e-14!82;UBERON:0002780!1.40e-13!41;UBERON:0001890!1.40e-13!41;UBERON:0006240!1.40e-13!41;UBERON:0001869!3.97e-13!32;UBERON:0001893!4.55e-13!34;UBERON:0002616!5.49e-13!59;UBERON:0003080!7.50e-13!42;UBERON:0002791!1.33e-12!33;UBERON:0000073!2.19e-12!94;UBERON:0001016!2.19e-12!94;UBERON:0002619!1.67e-11!22;UBERON:0003056!5.52e-11!61;UBERON:0000955!1.30e-10!69;UBERON:0006238!1.30e-10!69;UBERON:0000956!1.71e-10!25;UBERON:0000203!1.71e-10!25;UBERON:0001950!2.07e-10!20;UBERON:0000033!9.07e-09!123;UBERON:0000153!9.44e-09!129;UBERON:0007811!9.44e-09!129;UBERON:0000924!1.63e-08!173;UBERON:0006601!1.63e-08!173;UBERON:0004121!3.37e-08!169;UBERON:0000483!6.14e-08!309;UBERON:0000119!1.31e-07!312;UBERON:0004111!1.59e-07!241;UBERON:0000025!3.75e-07!194|ontology_enrichment_uberon_v019=UBERON:0002619;3.64e-13;22!UBERON:0001869;3.58e-12;32!UBERON:0002791;3.65e-12;32!UBERON:0001950;4.08e-12;20!UBERON:0003528;6.54e-12;34!UBERON:0002020;6.54e-12;34!UBERON:0001893;1.46e-11;34!UBERON:0000956;2.62e-11;25!UBERON:0000203;2.62e-11;25!UBERON:0002780;2.94e-10;41!UBERON:0001890;2.94e-10;41!UBERON:0000073;2.60e-08;53!UBERON:0002616;2.60e-08;53!UBERON:0005383;1.38e-07;3!UBERON:0005382;1.38e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.49e-17,81;UBERON:0001049,5.24e-15,56;UBERON:0005068,5.24e-15,56;UBERON:0006241,5.24e-15,56;UBERON:0007135,5.24e-15,56;UBERON:0001016,7.50e-15,89;UBERON:0000073,1.27e-14,53;UBERON:0002616,1.27e-14,53;UBERON:0002780,1.47e-14,41;UBERON:0001890,1.47e-14,41;UBERON:0003080,1.47e-14,41;UBERON:0006240,1.47e-14,41;UBERON:0003528,3.96e-14,34;UBERON:0002020,3.96e-14,34;UBERON:0002791,3.02e-13,32;UBERON:0001869,3.02e-13,32;UBERON:0002619,5.78e-13,22;UBERON:0001893,2.87e-12,34;UBERON:0001950,6.41e-12,20;UBERON:0003075,9.86e-12,82;UBERON:0007284,9.86e-12,82;UBERON:0007023,2.13e-11,114;UBERON:0000955,3.06e-11,68;UBERON:0006238,3.06e-11,68;UBERON:0000956,3.90e-11,25;UBERON:0000203,3.90e-11,25;UBERON:0002346,6.77e-11,86;UBERON:0004121,2.06e-09,171;UBERON:0000924,2.06e-09,171;UBERON:0006601,2.06e-09,171;UBERON:0003056,2.23e-08,61;UBERON:0005383,5.06e-08,3;UBERON:0005382,5.06e-08,3;UBERON:0010371,5.77e-08,104;UBERON:0010314,1.01e-07,132;UBERON:0004111,1.26e-07,240|phase1_expression=0.363356758541113,0.428201047781966,0.422863212287913,0,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0,0.791300934685361,0.247532705920093,0,0,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0.0764134057479513,0,0.157421562627358,0,0,0.154816123316076,0.919421224478927,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0.411202997999018,0.668745981562712,0,0.473447805734733,1.94826728407911,0.222820913770347,0,0.221533894583621,0.270803863765016,0.25618263945135,0.390178042679635,0.164437904603676,0.552700035571697,0.289803085735052,0.444859689486181,0.802622484269139,1.04535523804977,0.453237370790265,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0,0,0,0.821127996921047,0.403213486449465,0,0.434473211648397,0,0,0,0,1.50401373190767,0.144846518960824,0,1.45990461090791,0.189069634328136,0.886917589850256,0.175669571386252,0.261958150995425,0.364295288292542,0,0,0.348259474598534,0.26591592103773,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0.550236083880135,0,0,0.35576626268671,0,1.20848795132744,0,0.24406205754817,0,0,0.267899184852239,0.44905874525234,0.563057402416611,0,0.949265659568129,0.183201743930407,0,0,0,0.496971951695318,0.633152558322899,0,0.286836620748814,0,0,0,1.2333377420858,0,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0.312160076830321,0,0,0,0.161872944368132,0,0.204154171254893,0,0,1.18800285728205,1.7308685049499,0,0,0,0,0,0.438977620880838,0,0,0.2268643663200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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6638 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11164 | |||
|TSSclassifier=S | |||
|UniProt=P63162 | |||
|association_with_transcript=31bp_to_BC000611_5end | |||
|coexpression_cluster_id=C130 | |||
|description=CAGE_peak_7_at_SNRPN_5end | |||
|id=chr15:25219499..25219545,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;9.47e-13;5!CL:0000540;6.42e-11;6!CL:0000404;6.42e-11;6!CL:0002231;1.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.13e-13,5;CL:0000540,5.38e-11,6;CL:0000031,5.38e-11,6;CL:0000404,5.38e-11,6;CL:0000047,4.04e-08,8;CL:0002231,5.28e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;6.42e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;3.64e-13;22!UBERON:0001869;3.58e-12;32!UBERON:0002791;3.65e-12;32!UBERON:0001950;4.08e-12;20!UBERON:0003528;6.54e-12;34!UBERON:0002020;6.54e-12;34!UBERON:0001893;1.46e-11;34!UBERON:0000956;2.62e-11;25!UBERON:0000203;2.62e-11;25!UBERON:0002780;2.94e-10;41!UBERON:0001890;2.94e-10;41!UBERON:0000073;2.60e-08;53!UBERON:0002616;2.60e-08;53!UBERON:0005383;1.38e-07;3!UBERON:0005382;1.38e-07;3 | |||
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| |||
|short_description=p7@SNRPN | |||
}} |
Revision as of 06:23, 11 September 2013
Short description: | p7@SNRPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SNRPN_5end |
Coexpression cluster: | C130_iPS_HES3GFP_H9_teratocarcinoma_testicular_colon_Alveolar |
Association with transcript: | 31bp_to_BC000611_5end |
EntrezGene: | SNRPN |
HGNC: | 11164 |
UniProt: | P63162 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.13e-13 | 5 |
neuron | 5.38e-11 | 6 |
neuroblast | 5.38e-11 | 6 |
electrically signaling cell | 5.38e-11 | 6 |
neuronal stem cell | 4.04e-08 | 8 |
epithelial cell of prostate | 5.28e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.