FFCP PHASE1:Hg19::chr15:37387034..37387043,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C12|description=CAGE_peak_at_chr15:37387034..37387043,+|id=chr15:37387034..37387043,+|ontology_enrichment_celltype=CL:0002274!3.69e-13!5;CL:0000457!3.69e-13!5;CL:0002191!3.69e-13!5;CL:0000097!3.69e-13!5;CL:0000831!3.69e-13!5;CL:0002028!3.69e-13!5;CL:0000163!4.57e-07!9|ontology_enrichment_celltype_v019=CL:0000097;1.79e-33;5!CL:0002601;3.56e-19;1!CL:0000569;5.15e-19;4!CL:0000163;6.02e-19;9!CL:0002586;2.88e-07;3|ontology_enrichment_celltype_v019_2=CL:0000097,2.23e-33,5;CL:0002028,2.23e-33,5;CL:0002601,3.25e-19,1;CL:0000569,5.64e-19,4;CL:0000011,5.64e-19,4;CL:0000163,6.80e-19,9;CL:0002586,2.97e-07,3|ontology_enrichment_development_v019=CL:0000011;5.15e-19;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002134;3.56e-19;1!UBERON:0005208;3.56e-19;1!UBERON:0004145;3.56e-19;1!UBERON:0005946;3.56e-19;1!UBERON:0005965;3.56e-19;1!UBERON:0002078;3.56e-19;1!UBERON:0002081;2.85e-10;2!UBERON:0002133;2.85e-10;2!UBERON:0000948;5.45e-08;22!UBERON:0003978;2.88e-07;3!UBERON:0001781;2.88e-07;3!UBERON:0004151;2.88e-07;3!UBERON:0000946;2.88e-07;3!UBERON:0001782;2.88e-07;3!UBERON:0007100;4.27e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.71e-19,1;UBERON:0005208,2.71e-19,1;UBERON:0005946,2.71e-19,1;UBERON:0005965,2.71e-19,1;UBERON:0002078,2.71e-19,1;UBERON:0002081,2.49e-10,2;UBERON:0002133,2.49e-10,2;UBERON:0010227,2.49e-10,2;UBERON:0000948,2.25e-07,24;UBERON:0005498,2.25e-07,24;UBERON:0004140,2.25e-07,24;UBERON:0009881,2.25e-07,24;UBERON:0004141,2.25e-07,24;UBERON:0003084,2.25e-07,24;UBERON:0007005,2.25e-07,24;UBERON:0004139,2.25e-07,24;UBERON:0004291,2.25e-07,24;UBERON:0003978,2.63e-07,3;UBERON:0009751,2.63e-07,3;UBERON:0004151,2.63e-07,3;UBERON:0000946,2.63e-07,3;UBERON:0002523,2.63e-07,3;UBERON:0005983,2.63e-07,3;UBERON:0004145,2.63e-07,3;UBERON:0002165,2.63e-07,3;UBERON:0002062,2.63e-07,3;UBERON:0007280,2.63e-07,3;UBERON:0001782,2.97e-07,3;UBERON:0005424,2.97e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.264145302039678,7.46381215946779,2.01767934783746,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0,0,0,0.512900250232778,1.31205858279882,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.23874448473769,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0.984678443688556,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0,0.288950589901519,0,0,0,0,0,0.558564802544508,0,1.43574604915363,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.979762080328227,0,0,0.340776043570843,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,2.45076461410769,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0.447764408660622,0.701139929541673,1.10961172300523,0.947015026375446,0.251567901752575,0,1.14420034198462,0.302461847526478,2.33155800874171,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0.38582807654183,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_at_chr15:37387034..37387043,+ | |||
|id=chr15:37387034..37387043,+ | |||
|ontology_enrichment_celltype=CL:0002274!3.69e-13!5;CL:0000457!3.69e-13!5;CL:0002191!3.69e-13!5;CL:0000097!3.69e-13!5;CL:0000831!3.69e-13!5;CL:0002028!3.69e-13!5;CL:0000163!4.57e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.79e-33;5!CL:0002601;3.56e-19;1!CL:0000569;5.15e-19;4!CL:0000163;6.02e-19;9!CL:0002586;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.23e-33,5;CL:0002028,2.23e-33,5;CL:0002601,3.25e-19,1;CL:0000569,5.64e-19,4;CL:0000011,5.64e-19,4;CL:0000163,6.80e-19,9;CL:0002586,2.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000011;5.15e-19;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;3.56e-19;1!UBERON:0005208;3.56e-19;1!UBERON:0004145;3.56e-19;1!UBERON:0005946;3.56e-19;1!UBERON:0005965;3.56e-19;1!UBERON:0002078;3.56e-19;1!UBERON:0002081;2.85e-10;2!UBERON:0002133;2.85e-10;2!UBERON:0000948;5.45e-08;22!UBERON:0003978;2.88e-07;3!UBERON:0001781;2.88e-07;3!UBERON:0004151;2.88e-07;3!UBERON:0000946;2.88e-07;3!UBERON:0001782;2.88e-07;3!UBERON:0007100;4.27e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.71e-19,1;UBERON:0005208,2.71e-19,1;UBERON:0005946,2.71e-19,1;UBERON:0005965,2.71e-19,1;UBERON:0002078,2.71e-19,1;UBERON:0002081,2.49e-10,2;UBERON:0002133,2.49e-10,2;UBERON:0010227,2.49e-10,2;UBERON:0000948,2.25e-07,24;UBERON:0005498,2.25e-07,24;UBERON:0004140,2.25e-07,24;UBERON:0009881,2.25e-07,24;UBERON:0004141,2.25e-07,24;UBERON:0003084,2.25e-07,24;UBERON:0007005,2.25e-07,24;UBERON:0004139,2.25e-07,24;UBERON:0004291,2.25e-07,24;UBERON:0003978,2.63e-07,3;UBERON:0009751,2.63e-07,3;UBERON:0004151,2.63e-07,3;UBERON:0000946,2.63e-07,3;UBERON:0002523,2.63e-07,3;UBERON:0005983,2.63e-07,3;UBERON:0004145,2.63e-07,3;UBERON:0002165,2.63e-07,3;UBERON:0002062,2.63e-07,3;UBERON:0007280,2.63e-07,3;UBERON:0001782,2.97e-07,3;UBERON:0005424,2.97e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.264145302039678,7.46381215946779,2.01767934783746,2.27236380167484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0.232420756919918,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0,0,0,0.512900250232778,1.31205858279882,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41904425628239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0.23874448473769,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0.984678443688556,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0,0.288950589901519,0,0,0,0,0,0.558564802544508,0,1.43574604915363,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.979762080328227,0,0,0.340776043570843,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,2.45076461410769,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0.447764408660622,0.701139929541673,1.10961172300523,0.947015026375446,0.251567901752575,0,1.14420034198462,0.302461847526478,2.33155800874171,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0.38582807654183,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0.606965604236632,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p@chr15:37387034..37387043,+ | |||
}} |
Revision as of 06:43, 11 September 2013
Short description: | p@chr15:37387034..37387043, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:37387034..37387043, + |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.23e-33 | 5 |
basophil mast progenitor cell | 2.23e-33 | 5 |
uterine smooth muscle cell | 3.25e-19 | 1 |
cardiac mesenchymal cell | 5.64e-19 | 4 |
migratory trunk neural crest cell | 5.64e-19 | 4 |
endocrine cell | 6.80e-19 | 9 |
retinal pigment epithelial cell | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.71e-19 | 1 |
right atrium valve | 2.71e-19 | 1 |
outflow tract of atrium | 2.71e-19 | 1 |
outflow part of right atrium | 2.71e-19 | 1 |
right cardiac atrium | 2.71e-19 | 1 |
cardiac atrium | 2.49e-10 | 2 |
atrioventricular valve | 2.49e-10 | 2 |
future cardiac atrium | 2.49e-10 | 2 |
heart | 2.25e-07 | 24 |
primitive heart tube | 2.25e-07 | 24 |
primary heart field | 2.25e-07 | 24 |
anterior lateral plate mesoderm | 2.25e-07 | 24 |
heart tube | 2.25e-07 | 24 |
heart primordium | 2.25e-07 | 24 |
cardiac mesoderm | 2.25e-07 | 24 |
cardiogenic plate | 2.25e-07 | 24 |
heart rudiment | 2.25e-07 | 24 |
valve | 2.63e-07 | 3 |
cardiac mesenchyme | 2.63e-07 | 3 |
cardiac chamber | 2.63e-07 | 3 |
cardial valve | 2.63e-07 | 3 |
tunica intima | 2.63e-07 | 3 |
heart layer | 2.63e-07 | 3 |
outflow tract | 2.63e-07 | 3 |
endocardium | 2.63e-07 | 3 |
endocardial cushion | 2.63e-07 | 3 |
presumptive endocardium | 2.63e-07 | 3 |
pigmented layer of retina | 2.97e-07 | 3 |
presumptive retinal pigmented epithelium | 2.97e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.