FFCP PHASE1:Hg19::chr16:56703691..56703702,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4496|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7400|TSSclassifier=S|UniProt=P80294|association_with_transcript=-23bp_to_ENST00000332374,NM_005951,uc002ejw.2_5end|coexpression_cluster_id=C196|description=CAGE_peak_4_at_MT1H_5end|id=chr16:56703691..56703702,+|ontology_enrichment_celltype=CL:0002322!2.21e-15!5;CL:0000039!2.32e-08!7;CL:0000586!2.32e-08!7|ontology_enrichment_celltype_v019=CL:0000039;8.17e-24;7!CL:0000586;8.17e-24;7!CL:0000540;2.41e-15;6!CL:0000404;2.41e-15;6!CL:0000817;1.18e-11;1!CL:0000182;5.16e-08;12!CL:0000235;1.74e-07;6|ontology_enrichment_celltype_v019_2=CL:0000039,8.43e-24,7;CL:0000586,8.43e-24,7;CL:0000540,1.84e-15,6;CL:0000031,1.84e-15,6;CL:0000404,1.84e-15,6;CL:0000047,9.62e-12,8;CL:0000182,6.27e-08,12;CL:0000235,1.92e-07,6|ontology_enrichment_development_v019=UBERON:0009117;9.33e-17;10!UBERON:0005564;9.33e-17;10!CL:0000031;2.41e-15;6!UBERON:0004161;1.03e-08;11!UBERON:0009497;1.90e-07;13|ontology_enrichment_disease=DOID:3493!3.47e-07!2|ontology_enrichment_disease_v019=DOID:3095;1.03e-07;22!DOID:2994;1.03e-07;22|ontology_enrichment_disease_v019_2=DOID:3095,1.04e-07,22;DOID:2994,1.04e-07,22|ontology_enrichment_uberon=UBERON:0000473!2.65e-07!8;UBERON:0007023!4.09e-07!115;UBERON:0000059!4.26e-07!11;UBERON:0005743!8.36e-07!86|ontology_enrichment_uberon_v019=UBERON:0000473;7.08e-21;8!UBERON:0003135;2.95e-15;11!UBERON:0002107;5.20e-13;19!UBERON:0006925;5.20e-13;19!UBERON:0002423;7.31e-10;25!UBERON:0000922;3.36e-09;49!UBERON:0000991;4.47e-08;21!UBERON:0002365;6.35e-08;31!UBERON:0002330;6.35e-08;31!UBERON:0003101;1.03e-07;22!UBERON:0000079;1.03e-07;22!UBERON:0002368;8.87e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.27e-21,8;UBERON:0003135,3.01e-15,11;UBERON:0002107,5.76e-13,19;UBERON:0006925,5.76e-13,19;UBERON:0008836,5.76e-13,19;UBERON:0008835,3.48e-11,22;UBERON:0003894,3.48e-11,22;UBERON:0009854,1.08e-10,23;UBERON:0007499,7.89e-10,25;UBERON:0009497,7.89e-10,25;UBERON:0000015,7.89e-10,25;UBERON:0002423,7.89e-10,25;UBERON:0006235,7.89e-10,25;UBERON:0004161,7.89e-10,25;UBERON:0009856,1.91e-09,26;UBERON:0000991,4.51e-08,21;UBERON:0009196,4.51e-08,21;UBERON:0009117,4.51e-08,21;UBERON:0005564,4.51e-08,21;UBERON:0002365,6.70e-08,31;UBERON:0002330,6.70e-08,31;UBERON:0004176,1.04e-07,22;UBERON:0003101,1.04e-07,22;UBERON:0000079,1.04e-07,22;UBERON:0002368,5.59e-07,35|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.580969714347592,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,1.18157981336281,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.702012795417713,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.52176805644536,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68430861459359,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.442287822516696,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.136203406111576,1.28602518772015,1.37539436597234,1.66176135211674,0,0,0.0607495566580247,0,0.630445658393585,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,3.97520666736664,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471346769748006,0.280272163313789,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588901401691458,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.463044948647668,1.31135736302374,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,18.4599781832987,10.1542614000913,3.49200618232411,12.5353769646188,0,0,0,0.103432995861895,0,0,0,0,0,0.827413057616144,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@MT1H}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4496 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7400 | |||
|TSSclassifier=S | |||
|UniProt=P80294 | |||
|association_with_transcript=-23bp_to_ENST00000332374,NM_005951,uc002ejw.2_5end | |||
|coexpression_cluster_id=C196 | |||
|description=CAGE_peak_4_at_MT1H_5end | |||
|id=chr16:56703691..56703702,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.21e-15!5;CL:0000039!2.32e-08!7;CL:0000586!2.32e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.17e-24;7!CL:0000586;8.17e-24;7!CL:0000540;2.41e-15;6!CL:0000404;2.41e-15;6!CL:0000817;1.18e-11;1!CL:0000182;5.16e-08;12!CL:0000235;1.74e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.43e-24,7;CL:0000586,8.43e-24,7;CL:0000540,1.84e-15,6;CL:0000031,1.84e-15,6;CL:0000404,1.84e-15,6;CL:0000047,9.62e-12,8;CL:0000182,6.27e-08,12;CL:0000235,1.92e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.33e-17;10!UBERON:0005564;9.33e-17;10!CL:0000031;2.41e-15;6!UBERON:0004161;1.03e-08;11!UBERON:0009497;1.90e-07;13 | |||
|ontology_enrichment_disease=DOID:3493!3.47e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.03e-07;22!DOID:2994;1.03e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.04e-07,22;DOID:2994,1.04e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.65e-07!8;UBERON:0007023!4.09e-07!115;UBERON:0000059!4.26e-07!11;UBERON:0005743!8.36e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.08e-21;8!UBERON:0003135;2.95e-15;11!UBERON:0002107;5.20e-13;19!UBERON:0006925;5.20e-13;19!UBERON:0002423;7.31e-10;25!UBERON:0000922;3.36e-09;49!UBERON:0000991;4.47e-08;21!UBERON:0002365;6.35e-08;31!UBERON:0002330;6.35e-08;31!UBERON:0003101;1.03e-07;22!UBERON:0000079;1.03e-07;22!UBERON:0002368;8.87e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.27e-21,8;UBERON:0003135,3.01e-15,11;UBERON:0002107,5.76e-13,19;UBERON:0006925,5.76e-13,19;UBERON:0008836,5.76e-13,19;UBERON:0008835,3.48e-11,22;UBERON:0003894,3.48e-11,22;UBERON:0009854,1.08e-10,23;UBERON:0007499,7.89e-10,25;UBERON:0009497,7.89e-10,25;UBERON:0000015,7.89e-10,25;UBERON:0002423,7.89e-10,25;UBERON:0006235,7.89e-10,25;UBERON:0004161,7.89e-10,25;UBERON:0009856,1.91e-09,26;UBERON:0000991,4.51e-08,21;UBERON:0009196,4.51e-08,21;UBERON:0009117,4.51e-08,21;UBERON:0005564,4.51e-08,21;UBERON:0002365,6.70e-08,31;UBERON:0002330,6.70e-08,31;UBERON:0004176,1.04e-07,22;UBERON:0003101,1.04e-07,22;UBERON:0000079,1.04e-07,22;UBERON:0002368,5.59e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.580969714347592,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,1.18157981336281,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0.702012795417713,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.52176805644536,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68430861459359,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0.442287822516696,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.136203406111576,1.28602518772015,1.37539436597234,1.66176135211674,0,0,0.0607495566580247,0,0.630445658393585,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61207457045891,3.97520666736664,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471346769748006,0.280272163313789,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588901401691458,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.463044948647668,1.31135736302374,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,18.4599781832987,10.1542614000913,3.49200618232411,12.5353769646188,0,0,0,0.103432995861895,0,0,0,0,0,0.827413057616144,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@MT1H | |||
}} |
Revision as of 10:50, 11 September 2013
Short description: | p4@MT1H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MT1H_5end |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | -23bp_to_ENST00000332374, NM_005951, uc002ejw.2_5end |
EntrezGene: | MT1H |
HGNC: | 7400 |
UniProt: | P80294 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.43e-24 | 7 |
germ cell | 8.43e-24 | 7 |
neuron | 1.84e-15 | 6 |
neuroblast | 1.84e-15 | 6 |
electrically signaling cell | 1.84e-15 | 6 |
neuronal stem cell | 9.62e-12 | 8 |
hepatocyte | 6.27e-08 | 12 |
macrophage | 1.92e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 7.27e-21 | 8 |
male reproductive organ | 3.01e-15 | 11 |
liver | 5.76e-13 | 19 |
digestive gland | 5.76e-13 | 19 |
liver bud | 5.76e-13 | 19 |
hepatic diverticulum | 3.48e-11 | 22 |
liver primordium | 3.48e-11 | 22 |
digestive tract diverticulum | 1.08e-10 | 23 |
epithelial sac | 7.89e-10 | 25 |
epithelium of foregut-midgut junction | 7.89e-10 | 25 |
anatomical boundary | 7.89e-10 | 25 |
hepatobiliary system | 7.89e-10 | 25 |
foregut-midgut junction | 7.89e-10 | 25 |
septum transversum | 7.89e-10 | 25 |
sac | 1.91e-09 | 26 |
gonad | 4.51e-08 | 21 |
indifferent external genitalia | 4.51e-08 | 21 |
indifferent gonad | 4.51e-08 | 21 |
gonad primordium | 4.51e-08 | 21 |
exocrine gland | 6.70e-08 | 31 |
exocrine system | 6.70e-08 | 31 |
external genitalia | 1.04e-07 | 22 |
male organism | 1.04e-07 | 22 |
male reproductive system | 1.04e-07 | 22 |
endocrine gland | 5.59e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.04e-07 | 22 |
germ cell cancer | 1.04e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.