FFCP PHASE1:Hg19::chr16:80574943..80574957,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83657|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15467|TSSclassifier=S|UniProt=Q7Z4M1|association_with_transcript=21bp_to_ENST00000338542_5end|description=CAGE_peak_2_at_DYNLRB2_5end|id=chr16:80574943..80574957,+|ontology_enrichment_celltype=CL:0000791!4.74e-09!18;CL:0000789!4.74e-09!18;CL:0002420!4.74e-09!18;CL:0002419!4.74e-09!18;CL:0000790!4.74e-09!18;CL:0000838!3.50e-07!52;CL:0000542!6.20e-07!53;CL:0000051!6.20e-07!53|ontology_enrichment_celltype_v019=CL:0000623;6.88e-20;3!CL:0000228;9.07e-08;1!CL:0002372;9.07e-08;1!CL:0000895;9.07e-08;1|ontology_enrichment_celltype_v019_2=CL:0000623,1.16e-19,3;CL:0000825,1.16e-19,3;CL:0000838,1.68e-08,52;CL:0000542,2.58e-08,53;CL:0000051,2.58e-08,53;CL:0000810,5.70e-08,1;CL:0000895,5.70e-08,1;CL:0002436,5.70e-08,1;CL:0002427,5.70e-08,1;CL:0002428,5.70e-08,1;CL:0002429,5.70e-08,1;CL:0002433,5.70e-08,1;CL:0002431,5.70e-08,1;CL:0002432,5.70e-08,1;CL:0000228,7.45e-08,1;CL:0002372,7.45e-08,1|ontology_enrichment_development_v019=CL:0002427;9.07e-08;1!UBERON:0005425;9.07e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.63e-08!115;UBERON:0001049!4.52e-08!57;UBERON:0005068!4.52e-08!57;UBERON:0006241!4.52e-08!57;UBERON:0007135!4.52e-08!57;UBERON:0002616!9.82e-07!59|ontology_enrichment_uberon_v019=UBERON:0003127;8.96e-15;2!UBERON:0001896;8.31e-10;3!UBERON:0005290;8.31e-10;3!UBERON:0000941;9.07e-08;1!UBERON:0001301;9.07e-08;1!UBERON:0001785;9.07e-08;1!UBERON:0002464;9.07e-08;1!UBERON:0004904;9.07e-08;1!UBERON:0001021;9.07e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0003127,9.02e-15,2;UBERON:0001896,6.27e-10,3;UBERON:0005290,6.27e-10,3;UBERON:0010096,6.27e-10,3;UBERON:0001301,4.35e-08,1;UBERON:0000941,6.97e-08,1;UBERON:0001785,6.97e-08,1;UBERON:0002464,6.97e-08,1;UBERON:0004904,6.97e-08,1;UBERON:0001021,6.97e-08,1;UBERON:0003902,6.97e-08,1;UBERON:0005425,6.97e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,0.383829398097213,0.928896739896456,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0.377875943688809,0.242584061187816,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0.285012743741249,0,0.365328307529268,1.75996244461323,0,0,0,0.400395987036012,0,0,0,1.1384259382189,0,0.764546456250458,0,0.560508562981536,0,0.786839080455332,0,1.23360899399706,0,0.651844533267181,0.473447805734733,0,0.334231370655521,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0.276350017785848,0,1.03800594213442,0.267540828089713,1.04535523804977,0,1.53288197440768,2.06176467289578,1.51811815211702,0.318565414324097,0.651083453856419,0,0.451725357233318,0,0,0,0.821127996921047,1.20964045934839,0.267440195783507,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,1.18218456121156,1.2937654491571,1.15508732651774,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.515205058238611,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,1.16794399198336,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,1.79323189425963,0,0,0,0.369254416383208,0,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,0.520855522170466,0.437299999980979,0,0,0.508507300585533,0.472775363535873,0,0,0,0,0.361789315876224,0,0.442317039724898,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0.67401132980677,0,0.702793337176017,0.182454789215666,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.0870592065804026,1.92199335066233,0,0,0,0,0,0,0,0.411125773940253,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0,0,0,0,0,0,0.335434687599266,0.0788057072991982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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83657 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15467 | |||
|TSSclassifier=S | |||
|UniProt=Q7Z4M1 | |||
|association_with_transcript=21bp_to_ENST00000338542_5end | |||
|description=CAGE_peak_2_at_DYNLRB2_5end | |||
|id=chr16:80574943..80574957,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.74e-09!18;CL:0000789!4.74e-09!18;CL:0002420!4.74e-09!18;CL:0002419!4.74e-09!18;CL:0000790!4.74e-09!18;CL:0000838!3.50e-07!52;CL:0000542!6.20e-07!53;CL:0000051!6.20e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000623;6.88e-20;3!CL:0000228;9.07e-08;1!CL:0002372;9.07e-08;1!CL:0000895;9.07e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.16e-19,3;CL:0000825,1.16e-19,3;CL:0000838,1.68e-08,52;CL:0000542,2.58e-08,53;CL:0000051,2.58e-08,53;CL:0000810,5.70e-08,1;CL:0000895,5.70e-08,1;CL:0002436,5.70e-08,1;CL:0002427,5.70e-08,1;CL:0002428,5.70e-08,1;CL:0002429,5.70e-08,1;CL:0002433,5.70e-08,1;CL:0002431,5.70e-08,1;CL:0002432,5.70e-08,1;CL:0000228,7.45e-08,1;CL:0002372,7.45e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002427;9.07e-08;1!UBERON:0005425;9.07e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.63e-08!115;UBERON:0001049!4.52e-08!57;UBERON:0005068!4.52e-08!57;UBERON:0006241!4.52e-08!57;UBERON:0007135!4.52e-08!57;UBERON:0002616!9.82e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;8.96e-15;2!UBERON:0001896;8.31e-10;3!UBERON:0005290;8.31e-10;3!UBERON:0000941;9.07e-08;1!UBERON:0001301;9.07e-08;1!UBERON:0001785;9.07e-08;1!UBERON:0002464;9.07e-08;1!UBERON:0004904;9.07e-08;1!UBERON:0001021;9.07e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,9.02e-15,2;UBERON:0001896,6.27e-10,3;UBERON:0005290,6.27e-10,3;UBERON:0010096,6.27e-10,3;UBERON:0001301,4.35e-08,1;UBERON:0000941,6.97e-08,1;UBERON:0001785,6.97e-08,1;UBERON:0002464,6.97e-08,1;UBERON:0004904,6.97e-08,1;UBERON:0001021,6.97e-08,1;UBERON:0003902,6.97e-08,1;UBERON:0005425,6.97e-08,1 | |||
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|short_description=p2@DYNLRB2 | |||
}} |
Revision as of 11:40, 11 September 2013
Short description: | p2@DYNLRB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_DYNLRB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000338542_5end |
EntrezGene: | DYNLRB2 |
HGNC: | 15467 |
UniProt: | Q7Z4M1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.16e-19 | 3 |
pro-NK cell | 1.16e-19 | 3 |
lymphoid lineage restricted progenitor cell | 1.68e-08 | 52 |
lymphocyte | 2.58e-08 | 53 |
common lymphoid progenitor | 2.58e-08 | 53 |
CD4-positive, alpha-beta thymocyte | 5.70e-08 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 5.70e-08 | 1 |
mature CD4 single-positive thymocyte | 5.70e-08 | 1 |
resting double-positive thymocyte | 5.70e-08 | 1 |
double-positive blast | 5.70e-08 | 1 |
CD69-positive double-positive thymocyte | 5.70e-08 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 5.70e-08 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 5.70e-08 | 1 |
CD24-positive, CD4 single-positive thymocyte | 5.70e-08 | 1 |
multinucleate cell | 7.45e-08 | 1 |
myotube | 7.45e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 9.02e-15 | 2 |
medulla oblongata | 6.27e-10 | 3 |
myelencephalon | 6.27e-10 | 3 |
future myelencephalon | 6.27e-10 | 3 |
epididymis | 4.35e-08 | 1 |
cranial nerve II | 6.97e-08 | 1 |
cranial nerve | 6.97e-08 | 1 |
nerve trunk | 6.97e-08 | 1 |
nerve connecting eye with brain | 6.97e-08 | 1 |
nerve | 6.97e-08 | 1 |
retinal neural layer | 6.97e-08 | 1 |
presumptive neural retina | 6.97e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.