FFCP PHASE1:Hg19::chr17:62658220..62658231,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64750|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16809|TSSclassifier=S|UniProt=Q9HAU4,Q96DE7|association_with_transcript=154bp_to_ENST00000262435,NM_022739,uc002jep.1,uc002jeq.1,uc002jer.1_5end|description=CAGE_peak_6_at_SMURF2_5end|id=chr17:62658220..62658231,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000228;3.67e-23;1!CL:0002372;3.67e-23;1!CL:0002521;8.96e-09;3!CL:0002579;1.26e-08;3!CL:0000056;8.85e-07;4!CL:0000737;8.85e-07;4|ontology_enrichment_celltype_v019_2=CL:0000228,3.28e-23,1;CL:0002372,3.28e-23,1;CL:0002521,8.31e-09,3;CL:0002579,1.40e-08,3;CL:0000737,8.61e-07,4;CL:0000515,8.61e-07,4|ontology_enrichment_development_v019=UBERON:0009117;6.48e-10;10!UBERON:0005564;6.48e-10;10!CL:0000515;8.85e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2513;3.67e-23;1!DOID:3451;2.74e-12;2!DOID:4159;2.74e-12;2!DOID:0060122;2.74e-12;2!DOID:2394;3.23e-07;14|ontology_enrichment_disease_v019_2=DOID:2513,2.62e-23,1;DOID:3451,2.32e-12,2;DOID:4159,2.32e-12,2;DOID:0060122,2.32e-12,2;DOID:2394,3.04e-07,14|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001905;2.74e-12;2!UBERON:0002757;2.74e-12;2!UBERON:0010134;2.74e-12;2!UBERON:0005408;2.74e-12;2!UBERON:0001899;2.74e-12;2!UBERON:0000473;3.74e-12;8!UBERON:0000991;3.51e-10;21!UBERON:0003135;4.25e-09;11!UBERON:0002190;8.96e-09;3!UBERON:0000014;8.85e-07;4!UBERON:0003296;8.85e-07;4!UBERON:0010133;8.85e-07;4!UBERON:0002784;8.85e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.62e-12,2;UBERON:0002757,3.62e-12,2;UBERON:0010134,3.62e-12,2;UBERON:0005408,3.62e-12,2;UBERON:0001899,3.62e-12,2;UBERON:0000473,3.95e-12,8;UBERON:0000991,3.35e-10,21;UBERON:0009196,3.35e-10,21;UBERON:0009117,3.35e-10,21;UBERON:0005564,3.35e-10,21;UBERON:0004176,9.12e-10,22;UBERON:0003135,4.43e-09,11;UBERON:0002190,8.31e-09,3;UBERON:0002323,4.37e-08,46;UBERON:0004458,1.31e-07,49;UBERON:0003886,6.21e-07,54;UBERON:0000014,8.14e-07,4|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0.247532705920093,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0.393364276848904,0,0.309632246632152,0.919421224478927,0,0,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0,0,0,0.257575567634187,0.145398238779565,0.755751887377619,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0.56738522469114,0,0.502497330513487,0.521482918420201,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.589405839739707,0,0,0.324547393654683,0.174129737299267,0,0,0.571994910780128,0.371457501329565,0.79504962946682,0,0,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0.367663080345869,0.81014194788176,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.794455084879313,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0.280901613404497,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.302256294682921,0.339121184620975,0,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0.277765335475589,0,0,0,0,0.234817388471643,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0.335964256397719,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,0,1.42636905040718,0.434343920002738,0,0.716243852959582,0.112085143993527,0.197030760201927,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,0,0,0.12269149171914,0,0.542530047399471,0,0.178428988797162,0.157702415033935,0.468565659970853,0,0,0,0,0.553107505625109,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,1.02341449813341,0.160853921143607,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0,0,0,0.460404944679482,0.34444334449382,0,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0.464845549297286,0.94443704049192,0.6970372701606,0,0,0.869932992075073,0.55597265731176,0.286249773483982,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64750 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16809 | |||
|TSSclassifier=S | |||
|UniProt=Q9HAU4,Q96DE7 | |||
|association_with_transcript=154bp_to_ENST00000262435,NM_022739,uc002jep.1,uc002jeq.1,uc002jer.1_5end | |||
|description=CAGE_peak_6_at_SMURF2_5end | |||
|id=chr17:62658220..62658231,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;3.67e-23;1!CL:0002372;3.67e-23;1!CL:0002521;8.96e-09;3!CL:0002579;1.26e-08;3!CL:0000056;8.85e-07;4!CL:0000737;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,3.28e-23,1;CL:0002372,3.28e-23,1;CL:0002521,8.31e-09,3;CL:0002579,1.40e-08,3;CL:0000737,8.61e-07,4;CL:0000515,8.61e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.48e-10;10!UBERON:0005564;6.48e-10;10!CL:0000515;8.85e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;3.67e-23;1!DOID:3451;2.74e-12;2!DOID:4159;2.74e-12;2!DOID:0060122;2.74e-12;2!DOID:2394;3.23e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.62e-23,1;DOID:3451,2.32e-12,2;DOID:4159,2.32e-12,2;DOID:0060122,2.32e-12,2;DOID:2394,3.04e-07,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.74e-12;2!UBERON:0002757;2.74e-12;2!UBERON:0010134;2.74e-12;2!UBERON:0005408;2.74e-12;2!UBERON:0001899;2.74e-12;2!UBERON:0000473;3.74e-12;8!UBERON:0000991;3.51e-10;21!UBERON:0003135;4.25e-09;11!UBERON:0002190;8.96e-09;3!UBERON:0000014;8.85e-07;4!UBERON:0003296;8.85e-07;4!UBERON:0010133;8.85e-07;4!UBERON:0002784;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.62e-12,2;UBERON:0002757,3.62e-12,2;UBERON:0010134,3.62e-12,2;UBERON:0005408,3.62e-12,2;UBERON:0001899,3.62e-12,2;UBERON:0000473,3.95e-12,8;UBERON:0000991,3.35e-10,21;UBERON:0009196,3.35e-10,21;UBERON:0009117,3.35e-10,21;UBERON:0005564,3.35e-10,21;UBERON:0004176,9.12e-10,22;UBERON:0003135,4.43e-09,11;UBERON:0002190,8.31e-09,3;UBERON:0002323,4.37e-08,46;UBERON:0004458,1.31e-07,49;UBERON:0003886,6.21e-07,54;UBERON:0000014,8.14e-07,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0.247532705920093,0,0,0,0,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0.393364276848904,0,0.309632246632152,0.919421224478927,0,0,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0,0,0,0.257575567634187,0.145398238779565,0.755751887377619,0.242584061187816,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0.56738522469114,0,0.502497330513487,0.521482918420201,0,0,0.368277635987565,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.589405839739707,0,0,0.324547393654683,0.174129737299267,0,0,0.571994910780128,0.371457501329565,0.79504962946682,0,0,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0.367663080345869,0.81014194788176,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.794455084879313,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.149448680551801,0,0,0.280901613404497,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.302256294682921,0.339121184620975,0,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0.277765335475589,0,0,0,0,0.234817388471643,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0.335964256397719,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,0,1.42636905040718,0.434343920002738,0,0.716243852959582,0.112085143993527,0.197030760201927,0.431255149719035,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0.749007023947182,0,0,0.12269149171914,0,0.542530047399471,0,0.178428988797162,0.157702415033935,0.468565659970853,0,0,0,0,0.553107505625109,0.0868836144680828,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,1.02341449813341,0.160853921143607,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0,0,0,0.460404944679482,0.34444334449382,0,0.262248829918848,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0.464845549297286,0.94443704049192,0.6970372701606,0,0,0.869932992075073,0.55597265731176,0.286249773483982,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0.487426979262569,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0.876901770507525,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0.196498082026242,0.35667105148125,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.71623345421307,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,1.55519793830904,0.269605053441981,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.221158519862449,0,0,0,0.278847488557207,0.153900517007594,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0.210998064528027,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.189559738885464,0,0.103688191397247,0,0.330991955875499,0.941798755221676,0,0,0.277349346026277,0,0,0.174118413160805,0,0.171986032471617,0.290268993867255,0,0.0821154570532092,0,0,0,0,0.397429223405979,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0.717873024576814,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0.136203406111576,0,0,0,0.674921674654501,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0.316801009558219,0.179287339332845,0,0.714695326373367,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0.2506898940227,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0.228840068396924,0.302461847526478,0.310874401165561,0.147855149989634,0.318593534327405,0,0,0,0.265841714557995,0,0,1.14241563650639,0.406870733204662,0,0.107410557042488,0,1.99047944349308,0,0,0,0,0,0,0,0,0.694567422971502,0,0.179088841081487,0,0,0.176689145945881,0.771656153083659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| |||
|short_description=p6@SMURF2 | |||
}} |
Revision as of 15:04, 11 September 2013
Short description: | p6@SMURF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SMURF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 154bp_to_ENST00000262435, NM_022739, uc002jep.1, uc002jeq.1, uc002jer.1_5end |
EntrezGene: | SMURF2 |
HGNC: | 16809 |
UniProt: | Q9HAU4Q96DE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 3.28e-23 | 1 |
myotube | 3.28e-23 | 1 |
subcutaneous fat cell | 8.31e-09 | 3 |
omentum preadipocyte | 1.40e-08 | 3 |
striated muscle cell | 8.61e-07 | 4 |
skeletal muscle myoblast | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.62e-12 | 2 |
regional part of epithalamus | 3.62e-12 | 2 |
secretory circumventricular organ | 3.62e-12 | 2 |
circumventricular organ | 3.62e-12 | 2 |
epithalamus | 3.62e-12 | 2 |
testis | 3.95e-12 | 8 |
gonad | 3.35e-10 | 21 |
indifferent external genitalia | 3.35e-10 | 21 |
indifferent gonad | 3.35e-10 | 21 |
gonad primordium | 3.35e-10 | 21 |
external genitalia | 9.12e-10 | 22 |
male reproductive organ | 4.43e-09 | 11 |
subcutaneous adipose tissue | 8.31e-09 | 3 |
body cavity | 4.37e-08 | 46 |
body cavity or lining | 1.31e-07 | 49 |
body cavity precursor | 6.21e-07 | 54 |
zone of skin | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.62e-23 | 1 |
skin carcinoma | 2.32e-12 | 2 |
skin cancer | 2.32e-12 | 2 |
integumentary system cancer | 2.32e-12 | 2 |
ovarian cancer | 3.04e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.