FFCP PHASE1:Hg19::chr19:18476053..18476056,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:18476053..18476056,+|id=chr19:18476053..18476056,+|ontology_enrichment_celltype=CL:0002139!1.55e-07!24|ontology_enrichment_celltype_v019=CL:0002567;6.20e-25;3!CL:0002262;2.37e-10;2!CL:0000771;2.37e-10;2!CL:1000398;2.37e-10;2!CL:0000148;3.62e-08;10!CL:0000182;5.98e-07;12|ontology_enrichment_celltype_v019_2=CL:0002567,6.22e-25,3;CL:0002262,2.72e-10,2;CL:1000398,2.72e-10,2;CL:0000771,2.99e-10,2;CL:0000148,3.63e-08,10;CL:0000541,3.63e-08,10;CL:0000182,5.81e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001280;6.20e-25;3!UBERON:0004647;6.20e-25;3!UBERON:0001282;2.47e-19;1!UBERON:0009842;2.47e-19;1!UBERON:0003704;2.47e-19;1!UBERON:0001171;2.47e-19;1!UBERON:0001172;2.47e-19;1!UBERON:0001281;2.37e-10;2!UBERON:0003497;2.37e-10;2!UBERON:0003909;2.37e-10;2!UBERON:0003835;2.37e-10;2|ontology_enrichment_uberon_v019_2=UBERON:0001280,5.50e-25,3;UBERON:0004647,5.50e-25,3;UBERON:0005171,5.50e-25,3;UBERON:0001282,1.56e-19,1;UBERON:0009842,1.56e-19,1;UBERON:0003704,1.56e-19,1;UBERON:0001171,1.56e-19,1;UBERON:0001172,1.56e-19,1;UBERON:0002394,5.11e-13,6;UBERON:0003928,5.11e-13,6;UBERON:0001281,2.72e-10,2;UBERON:0003497,2.72e-10,2;UBERON:0003909,2.72e-10,2;UBERON:0003835,2.72e-10,2;UBERON:0002294,5.42e-09,9;UBERON:0001173,5.42e-09,9;UBERON:0004912,5.42e-09,9|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0.369754010166788,0,0.142169232487422,0.880801318004542,0,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0.575384784644301,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0.612167784741805,0.641858054152187,0,0,0,0,0,0,0,0,0,2.17188844705117,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0.838634582033504,0.22465726229299,0.150176892841506,0.16072558669708,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0.993812036833525,0,0,0,0.419499436209906,0,0.835979866147242,0.258416759169329,1.42306505074684,0,0,0,0,0,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0.949265659568129,0.549605231791222,1.31780417436063,0,0,0,0,0.794455084879313,0.286836620748814,0,0,0,0.49333509683432,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0,0.829312462163088,0,1.51490920111656,0.063497894292169,0,1.17217447210047,1.71072446022705,0.514137463516618,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0.650756789328606,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.573645408816206,0,0.35667105148125,0.354761064070598,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70913083770502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80388103297391,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.219267951258557,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.295282444544246,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0,0.303298235083296,0,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0.449803112163605,0,0,0.265841714557995,0,0.150257608997218,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0.512483037175893,0.345430341731199,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.514464028312255,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0.098150233615243,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0.297046400327086,0,0,0.0939839179798536,0.322289439867886,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.227336094654718,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0|short_description=p@chr19:18476053..18476056,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:18476053..18476056,+ | |||
|id=chr19:18476053..18476056,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.55e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002567;6.20e-25;3!CL:0002262;2.37e-10;2!CL:0000771;2.37e-10;2!CL:1000398;2.37e-10;2!CL:0000148;3.62e-08;10!CL:0000182;5.98e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,6.22e-25,3;CL:0002262,2.72e-10,2;CL:1000398,2.72e-10,2;CL:0000771,2.99e-10,2;CL:0000148,3.63e-08,10;CL:0000541,3.63e-08,10;CL:0000182,5.81e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001280;6.20e-25;3!UBERON:0004647;6.20e-25;3!UBERON:0001282;2.47e-19;1!UBERON:0009842;2.47e-19;1!UBERON:0003704;2.47e-19;1!UBERON:0001171;2.47e-19;1!UBERON:0001172;2.47e-19;1!UBERON:0001281;2.37e-10;2!UBERON:0003497;2.37e-10;2!UBERON:0003909;2.37e-10;2!UBERON:0003835;2.37e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001280,5.50e-25,3;UBERON:0004647,5.50e-25,3;UBERON:0005171,5.50e-25,3;UBERON:0001282,1.56e-19,1;UBERON:0009842,1.56e-19,1;UBERON:0003704,1.56e-19,1;UBERON:0001171,1.56e-19,1;UBERON:0001172,1.56e-19,1;UBERON:0002394,5.11e-13,6;UBERON:0003928,5.11e-13,6;UBERON:0001281,2.72e-10,2;UBERON:0003497,2.72e-10,2;UBERON:0003909,2.72e-10,2;UBERON:0003835,2.72e-10,2;UBERON:0002294,5.42e-09,9;UBERON:0001173,5.42e-09,9;UBERON:0004912,5.42e-09,9 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0.369754010166788,0,0.142169232487422,0.880801318004542,0,0,0,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0.575384784644301,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0.612167784741805,0.641858054152187,0,0,0,0,0,0,0,0,0,2.17188844705117,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0.838634582033504,0.22465726229299,0.150176892841506,0.16072558669708,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0.993812036833525,0,0,0,0.419499436209906,0,0.835979866147242,0.258416759169329,1.42306505074684,0,0,0,0,0,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0.949265659568129,0.549605231791222,1.31780417436063,0,0,0,0,0.794455084879313,0.286836620748814,0,0,0,0.49333509683432,0,0,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0.710019185033229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.433099343283221,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0,0.829312462163088,0,1.51490920111656,0.063497894292169,0,1.17217447210047,1.71072446022705,0.514137463516618,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0,0,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0.650756789328606,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.573645408816206,0,0.35667105148125,0.354761064070598,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70913083770502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80388103297391,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.219267951258557,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.295282444544246,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0,0.303298235083296,0,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0.449803112163605,0,0,0.265841714557995,0,0.150257608997218,0,0,0.181848659202559,0,0.464033759878494,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0.512483037175893,0.345430341731199,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.514464028312255,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0.098150233615243,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0.297046400327086,0,0,0.0939839179798536,0.322289439867886,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0.227336094654718,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr19:18476053..18476056,+ | |||
}} |
Revision as of 19:26, 11 September 2013
Short description: | p@chr19:18476053..18476056, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:18476053..18476056, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 6.22e-25 | 3 |
endothelial cell of sinusoid | 2.72e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.72e-10 | 2 |
eosinophil | 2.99e-10 | 2 |
melanocyte | 3.63e-08 | 10 |
melanoblast | 3.63e-08 | 10 |
hepatocyte | 5.81e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
liver parenchyma | 5.50e-25 | 3 |
liver lobule | 5.50e-25 | 3 |
hepatic duct | 5.50e-25 | 3 |
intralobular bile duct | 1.56e-19 | 1 |
acinus | 1.56e-19 | 1 |
intrahepatic bile duct | 1.56e-19 | 1 |
portal lobule | 1.56e-19 | 1 |
hepatic acinus | 1.56e-19 | 1 |
bile duct | 5.11e-13 | 6 |
digestive system duct | 5.11e-13 | 6 |
hepatic sinusoid | 2.72e-10 | 2 |
abdomen blood vessel | 2.72e-10 | 2 |
sinusoid | 2.72e-10 | 2 |
abdominal segment blood vessel | 2.72e-10 | 2 |
biliary system | 5.42e-09 | 9 |
biliary tree | 5.42e-09 | 9 |
biliary bud | 5.42e-09 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.