FFCP PHASE1:Hg19::chr19:50435736..50435781,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22809|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=790|TSSclassifier=N|UniProt=Q9Y2D1|association_with_transcript=-208bp_to_AF101388_5end|coexpression_cluster_id=C5|description=CAGE_peak_3_at_ATF5_5end|id=chr19:50435736..50435781,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000860;3.42e-11;33!CL:0002057;3.42e-11;33!CL:0002334;3.17e-09;12!CL:0000473;6.32e-08;39!CL:0000234;6.32e-08;39!CL:0000136;1.89e-07;13|ontology_enrichment_celltype_v019_2=CL:0002334,2.78e-09,12;CL:0000136,5.47e-09,15;CL:0000860,2.49e-08,42;CL:0002057,2.49e-08,42;CL:0000473,3.76e-07,48;CL:0000234,3.76e-07,48;CL:0000723,8.68e-07,433|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001013;4.60e-10;14!UBERON:0004457;3.78e-08;9!UBERON:0000042;3.78e-08;9!UBERON:0003688;3.14e-07;6!UBERON:0002358;3.14e-07;6!UBERON:0003684;3.14e-07;6!UBERON:0001178;3.14e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001013,5.17e-10,14;UBERON:0004457,3.70e-07,12;UBERON:0000042,3.70e-07,12;UBERON:0003688,4.09e-07,6;UBERON:0002358,4.09e-07,6;UBERON:0003684,4.09e-07,6;UBERON:0001178,4.09e-07,6|phase1_expression=2.54349730978779,8.13581990785736,4.36958652697511,2.00146596706261,6.70441641640932,7.85104671690332,12.6649939084155,6.31719873426831,1.82829939739887,0.245733936501509,1.39560233594486,0,0,0.123766352960047,0.331397375727916,2.6893005858071,1.20538905604795,0,1.46379839637152,0.123121058076788,0.204000691244253,1.25381888591235,0.286235987131057,0.547497700291537,0,3.2857764471619,3.28402357799783,4.25038219093868,0,0,0,0,0.90361775633475,0.369754010166788,0.387336002901508,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0.257575567634187,1.74477886535478,3.77875943688809,2.91100873425379,5.34586784883075,4.52284676824008,2.47765096716083,1.7261543539329,1.2808035326455,0.236482229888585,3.10271112662957,1.29096936716765,0,3.76484679085209,6.82265375144614,0.898893937780338,4.59125838556354,2.56743221660875,2.55734850319616,1.9791078011203,1.79517291859469,1.70489900213078,5.5139755339431,2.26954089876456,0.622822248995575,1.50749199154046,0.521482918420201,0.65156653411535,6.05399502633369,2.57794345191295,1.26584954976354,0.422510572623884,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0.557052284425868,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,0,0,0.383587685530591,0,0,1.30361867064741,0,0,0.189069634328136,0.443458794925128,0.43917392846563,0.589405839739707,0,1.11235332835329,0,0.522389211897802,1.32957960518865,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,2.20094433552054,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0.760272105718513,1.70843440283719,1.10298924103761,2.43042584364528,1.25019619597712,0,0.675668882899933,0,0.949265659568129,0,0,0,0,0,3.67228483827281,1.32409180813219,6.02356903572509,6.02936249737207,0.560677600142307,0,1.2333377420858,0,0.67355336034844,0.326923806226917,0.151357427644931,0.576175924479999,0,0.624320153660641,0,0.747243402759005,0.469737994575059,0.161872944368132,0.421352420106746,0.408308342509787,0.61417158655884,0.309977343527296,0,0.494533858557114,1.82032272387605,2.87447256726495,0,0.375355559615893,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0,0,1.48352330811693,0.300091096084402,0.206105058476878,0.257640540045629,0.37223371266318,0.337552664482532,4.09235421677034,0.504867548488229,0.368199594569197,1.13152239773168,0.710019185033229,0.604512589365842,0.169560592310488,0.386521706326594,0.272746120590835,0.286804595389004,0.731842236777572,0,1.16193942869518,0.518305275076852,0.504641701751257,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0,0.473227200159376,0.337169380156203,0.241011029883482,0.55146986366197,0,0.474541238222193,0.539325232640658,0.784885860501384,0.38474715694639,0.738155454624648,1.40241773803446,0,0,62.1099670626971,94.3514128010521,42.5368732810611,0.882926198829301,0.491953754172454,0.514703430895577,1.09750285408626,0,0.201057944823262,0.277765335475589,0.651616610620649,0,0,0,0.469634776943287,0.288732895522148,1.38895653772983,0.951270761172991,1.58040879591855,0.858486162094873,0.246217006087397,0.468008530278475,0.891786973732369,0.93733833986777,0.335964256397719,0.283550194484773,0.0895585227028483,0.581267877027924,0.383382679165211,0.492663237895943,0.616339038092582,0.207328115540772,0.864719720501769,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0,0.571652865261156,0.224262168690721,0.43596006883328,0.4400297149257,0.258543431515556,3.576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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=790 | |||
|TSSclassifier=N | |||
|UniProt=Q9Y2D1 | |||
|association_with_transcript=-208bp_to_AF101388_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_ATF5_5end | |||
|id=chr19:50435736..50435781,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.42e-11;33!CL:0002057;3.42e-11;33!CL:0002334;3.17e-09;12!CL:0000473;6.32e-08;39!CL:0000234;6.32e-08;39!CL:0000136;1.89e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.78e-09,12;CL:0000136,5.47e-09,15;CL:0000860,2.49e-08,42;CL:0002057,2.49e-08,42;CL:0000473,3.76e-07,48;CL:0000234,3.76e-07,48;CL:0000723,8.68e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.60e-10;14!UBERON:0004457;3.78e-08;9!UBERON:0000042;3.78e-08;9!UBERON:0003688;3.14e-07;6!UBERON:0002358;3.14e-07;6!UBERON:0003684;3.14e-07;6!UBERON:0001178;3.14e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,5.17e-10,14;UBERON:0004457,3.70e-07,12;UBERON:0000042,3.70e-07,12;UBERON:0003688,4.09e-07,6;UBERON:0002358,4.09e-07,6;UBERON:0003684,4.09e-07,6;UBERON:0001178,4.09e-07,6 | |||
|phase1_expression=2.54349730978779,8.13581990785736,4.36958652697511,2.00146596706261,6.70441641640932,7.85104671690332,12.6649939084155,6.31719873426831,1.82829939739887,0.245733936501509,1.39560233594486,0,0,0.123766352960047,0.331397375727916,2.6893005858071,1.20538905604795,0,1.46379839637152,0.123121058076788,0.204000691244253,1.25381888591235,0.286235987131057,0.547497700291537,0,3.2857764471619,3.28402357799783,4.25038219093868,0,0,0,0,0.90361775633475,0.369754010166788,0.387336002901508,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0.257575567634187,1.74477886535478,3.77875943688809,2.91100873425379,5.34586784883075,4.52284676824008,2.47765096716083,1.7261543539329,1.2808035326455,0.236482229888585,3.10271112662957,1.29096936716765,0,3.76484679085209,6.82265375144614,0.898893937780338,4.59125838556354,2.56743221660875,2.55734850319616,1.9791078011203,1.79517291859469,1.70489900213078,5.5139755339431,2.26954089876456,0.622822248995575,1.50749199154046,0.521482918420201,0.65156653411535,6.05399502633369,2.57794345191295,1.26584954976354,0.422510572623884,0.425208599930087,0.209658645508376,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0.557052284425868,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0,0.534880391567015,0.144824403882799,0,0,0.383587685530591,0,0,1.30361867064741,0,0,0.189069634328136,0.443458794925128,0.43917392846563,0.589405839739707,0,1.11235332835329,0,0.522389211897802,1.32957960518865,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,2.20094433552054,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0.760272105718513,1.70843440283719,1.10298924103761,2.43042584364528,1.25019619597712,0,0.675668882899933,0,0.949265659568129,0,0,0,0,0,3.67228483827281,1.32409180813219,6.02356903572509,6.02936249737207,0.560677600142307,0,1.2333377420858,0,0.67355336034844,0.326923806226917,0.151357427644931,0.576175924479999,0,0.624320153660641,0,0.747243402759005,0.469737994575059,0.161872944368132,0.421352420106746,0.408308342509787,0.61417158655884,0.309977343527296,0,0.494533858557114,1.82032272387605,2.87447256726495,0,0.375355559615893,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0,0,1.48352330811693,0.300091096084402,0.206105058476878,0.257640540045629,0.37223371266318,0.337552664482532,4.09235421677034,0.504867548488229,0.368199594569197,1.13152239773168,0.710019185033229,0.604512589365842,0.169560592310488,0.386521706326594,0.272746120590835,0.286804595389004,0.731842236777572,0,1.16193942869518,0.518305275076852,0.504641701751257,0.72995471815166,0,0.643240938192885,0,0.464367928031979,0,0.473227200159376,0.337169380156203,0.241011029883482,0.55146986366197,0,0.474541238222193,0.539325232640658,0.784885860501384,0.38474715694639,0.738155454624648,1.40241773803446,0,0,62.1099670626971,94.3514128010521,42.5368732810611,0.882926198829301,0.491953754172454,0.514703430895577,1.09750285408626,0,0.201057944823262,0.277765335475589,0.651616610620649,0,0,0,0.469634776943287,0.288732895522148,1.38895653772983,0.951270761172991,1.58040879591855,0.858486162094873,0.246217006087397,0.468008530278475,0.891786973732369,0.93733833986777,0.335964256397719,0.283550194484773,0.0895585227028483,0.581267877027924,0.383382679165211,0.492663237895943,0.616339038092582,0.207328115540772,0.864719720501769,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0,0.571652865261156,0.224262168690721,0.43596006883328,0.4400297149257,0.258543431515556,3.57656445851882,0,0.797814349754612,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,1.64648067356154,0,0.355391948742546,0.791951872933429,1.20575750823834,0.871533458600294,2.49932477955143,0,1.50677127429638,0,0.479249710983165,0,0,0.144781306667579,0,0.537182889719687,0.672510863961164,0,0,0.385029108839245,0.76228387266739,0,0,0.335032530668698,0,0,0,0,0.36807447515742,0.500170521059677,0,0.623912584592421,0.535286966391485,0.630809660135739,0.117141414992713,0,0,2.0694614258501,0,0.368738337083406,0.434418072340414,0.195801157462741,0,0.206768026122887,0.215714200818617,0.213455115606889,0.303127571446259,1.66435439510497,2.11673205330776,2.97729369382532,1.38115775959256,8.98112302185835,4.61300937320523,3.07024349440022,3.53878626515936,4.45254199334973,1.54209693802656,2.13074070375753,0.657017248110473,3.11552657510173,1.27831416305955,0.604297247958111,1.40354529212299,0.552485933615378,0.918515585316854,1.0925470080403,2.62248829918848,0,0.0770153371044148,0.784349769176855,1.46139224653261,0.316654886678627,0,0.680374821106063,0.863663664408557,3.08454505380579,0.541892875087706,0,0,0.831076008928724,0.671624264166535,0.219259876645935,0,0,0,1.62689197332152,7.52199385028373,0.183138929636687,0.082509499920588,1.14853107599234,2.60024098414608,0,6.67027956215642,0.3080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| |||
|short_description=p3@ATF5 | |||
}} |
Revision as of 21:53, 11 September 2013
Short description: | p3@ATF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ATF5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -208bp_to_AF101388_5end |
EntrezGene: | ATF5 |
HGNC: | 790 |
UniProt: | Q9Y2D1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.78e-09 | 12 |
fat cell | 5.47e-09 | 15 |
classical monocyte | 2.49e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.49e-08 | 42 |
defensive cell | 3.76e-07 | 48 |
phagocyte | 3.76e-07 | 48 |
somatic stem cell | 8.68e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 5.17e-10 | 14 |
cavity lining | 3.70e-07 | 12 |
serous membrane | 3.70e-07 | 12 |
omentum | 4.09e-07 | 6 |
peritoneum | 4.09e-07 | 6 |
abdominal cavity | 4.09e-07 | 6 |
visceral peritoneum | 4.09e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.