FFCP PHASE1:Hg19::chr19:58609813..58609831,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:58609813..58609831,+|id=chr19:58609813..58609831,+|ontology_enrichment_celltype=CL:0002057!1.06e-07!42;CL:0000738!1.77e-07!140;CL:0000860!9.00e-07!45|ontology_enrichment_celltype_v019=CL:0000097;3.73e-15;5!CL:0000094;2.46e-09;8!CL:0000037;5.74e-09;1!CL:0000228;5.74e-09;1!CL:0001024;5.74e-09;1!CL:0002372;5.74e-09;1!CL:0000163;1.23e-08;9!CL:0000081;6.50e-07;11|ontology_enrichment_celltype_v019_2=CL:0000097,3.75e-15,5;CL:0002028,3.75e-15,5;CL:0000094,2.26e-09,8;CL:0001024,4.54e-09,1;CL:0000228,4.91e-09,1;CL:0002372,4.91e-09,1;CL:0000163,1.23e-08,9;CL:0000766,2.61e-07,72;CL:0000081,6.13e-07,11|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3347;5.74e-09;1|ontology_enrichment_disease_v019_2=DOID:3347,5.75e-09,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002426;5.74e-09;1!UBERON:0003831;5.74e-09;1!UBERON:0003898;5.74e-09;1!UBERON:0004830;5.74e-09;1!UBERON:0003830;5.74e-09;1!UBERON:0005175;5.74e-09;1!UBERON:0001774;5.74e-09;1!UBERON:0001103;5.74e-09;1|ontology_enrichment_uberon_v019_2=UBERON:0002426,3.58e-09,1;UBERON:0003831,3.58e-09,1;UBERON:0003898,3.58e-09,1;UBERON:0004830,3.58e-09,1;UBERON:0003830,3.58e-09,1;UBERON:0005175,3.58e-09,1;UBERON:0001774,3.58e-09,1;UBERON:0001103,3.58e-09,1;UBERON:0010084,3.58e-09,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,0.77408061658038,0,0,0,0,0,1.46800219667424,0,0,0.651032612147555,0,0,0,0,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0.645484683583826,1.35426486594342,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0.290209238628584,1.70215567407342,0.622822248995575,0,0.521482918420201,0.868755378820466,0,0,0.316462387440884,0.422510572623884,0,1.04829322754188,0.112328631146495,0.150176892841506,0,0.285012743741249,0.19891667719909,0.365328307529268,0,0.546138611262131,0,0.853460445133014,0,0.574752439954483,0,0,0.569212969109448,1.76171156811282,0,2.64342657158052,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0.443067789167242,0,0,0,0,0,0,0,0.267540828089713,1.04535523804977,0,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.602300476311091,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.327447688744282,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0.515281080091258,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0.265059536642971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,5.59785911960085,5.47655822984453,5.0496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0.394061520403854,0,0.513372145118994,0,0,0,0.335032530668698,0,0,0,1.24324654030811,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0.540031437238115,0,0.213648142254946,0,0,0.185803175125719,0.144269212976445,0.213425530045242,0,0,0.191505370132367,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0.260427761085233,0,0,0,0.762760950878299,0,0.344743373241465,0,0.173624994933292,2.65722415744152,0.241192877250816,1.52581736317083,0,0,0,0,0,0.307801034015188,0,0,0,0,0.957003479195758,0,1.06606955203727,0,0,0,0,0,0,0,0.158936578980379,0,0.326465616318295,0,0.216388639742091,0,0,0,0,0,0,0.337005664903385,1.60515529459758,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.52418000472609,0.171986032471617,0,0,0,0,0.706049013532002,0.225980740780532,0,0,0.189932387867636,0.391102765469606,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.558564802544508,0.229160424011684,0,0,0,0.223171457441873,0,0,1.16495949527454,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0.275078873194468,0,0.674921674654501,0.77380195455795,0.182248669974074,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0,0.339936274560377,0,0,0.387848869084652,0,0,0,0.213574825135389,0.78602152549833,0,0,0,0,0,0.5440178033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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:58609813..58609831,+ | |||
|id=chr19:58609813..58609831,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.06e-07!42;CL:0000738!1.77e-07!140;CL:0000860!9.00e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.73e-15;5!CL:0000094;2.46e-09;8!CL:0000037;5.74e-09;1!CL:0000228;5.74e-09;1!CL:0001024;5.74e-09;1!CL:0002372;5.74e-09;1!CL:0000163;1.23e-08;9!CL:0000081;6.50e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.75e-15,5;CL:0002028,3.75e-15,5;CL:0000094,2.26e-09,8;CL:0001024,4.54e-09,1;CL:0000228,4.91e-09,1;CL:0002372,4.91e-09,1;CL:0000163,1.23e-08,9;CL:0000766,2.61e-07,72;CL:0000081,6.13e-07,11 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;5.74e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,5.75e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;5.74e-09;1!UBERON:0003831;5.74e-09;1!UBERON:0003898;5.74e-09;1!UBERON:0004830;5.74e-09;1!UBERON:0003830;5.74e-09;1!UBERON:0005175;5.74e-09;1!UBERON:0001774;5.74e-09;1!UBERON:0001103;5.74e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,3.58e-09,1;UBERON:0003831,3.58e-09,1;UBERON:0003898,3.58e-09,1;UBERON:0004830,3.58e-09,1;UBERON:0003830,3.58e-09,1;UBERON:0005175,3.58e-09,1;UBERON:0001774,3.58e-09,1;UBERON:0001103,3.58e-09,1;UBERON:0010084,3.58e-09,1 | |||
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| |||
|short_description=p@chr19:58609813..58609831,+ | |||
}} |
Revision as of 22:38, 11 September 2013
Short description: | p@chr19:58609813..58609831, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:58609813..58609831, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.75e-15 | 5 |
basophil mast progenitor cell | 3.75e-15 | 5 |
granulocyte | 2.26e-09 | 8 |
CD34-positive, CD38-negative hematopoietic stem cell | 4.54e-09 | 1 |
multinucleate cell | 4.91e-09 | 1 |
myotube | 4.91e-09 | 1 |
endocrine cell | 1.23e-08 | 9 |
myeloid leukocyte | 2.61e-07 | 72 |
blood cell | 6.13e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 3.58e-09 | 1 |
respiratory system muscle | 3.58e-09 | 1 |
skeletal muscle of trunk | 3.58e-09 | 1 |
respiratory system skeletal muscle | 3.58e-09 | 1 |
thoracic segment muscle | 3.58e-09 | 1 |
chest organ | 3.58e-09 | 1 |
muscle of trunk | 3.58e-09 | 1 |
diaphragm | 3.58e-09 | 1 |
future diaphragm | 3.58e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 5.75e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.