Personal tools

FFCP PHASE1:Hg19::chr1:114654778..114654823,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C445|description=CAGE_peak_at_chr1:114654778..114654823,+|id=chr1:114654778..114654823,+|ontology_enrichment_celltype=CL:0002536!1.12e-09!2;CL:0000815!1.22e-09!2;CL:0000792!1.22e-09!2;CL:0002677!1.22e-09!2;CL:0000242!1.33e-09!2;CL:0002549!1.71e-09!2;CL:0000898!7.70e-07!3|ontology_enrichment_celltype_v019=CL:0000333;1.71e-14;5|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007123;1.71e-14;5|ontology_enrichment_disease=DOID:3112!3.75e-18!1;DOID:3193!8.69e-10!2;DOID:962!8.69e-10!2;DOID:3095!2.47e-07!22;DOID:2994!2.47e-07!22;DOID:305!3.02e-07!106;DOID:1192!6.14e-07!3;DOID:0050687!7.73e-07!143|ontology_enrichment_disease_v019=DOID:3112;3.34e-66;1!DOID:3193;5.96e-34;2!DOID:962;5.96e-34;2!DOID:1192;3.66e-23;3!DOID:169;2.59e-12;6!DOID:171;6.34e-08;10!DOID:3093;8.14e-07;11|ontology_enrichment_disease_v019_2=DOID:3112,4.66e-66,1;DOID:3193,5.04e-34,2;DOID:962,5.04e-34,2;DOID:1192,3.27e-23,3;DOID:169,2.45e-12,6;DOID:171,6.13e-08,10;DOID:3093,7.92e-07,11|ontology_enrichment_uberon=UBERON:0001301!1.03e-17!1;UBERON:0003714!8.69e-10!2;UBERON:0003947!1.71e-09!2;UBERON:0005629!1.71e-09!2;UBERON:0005358!1.71e-09!2;UBERON:0001886!1.71e-09!2;UBERON:0004086!1.71e-09!2;UBERON:0005282!1.71e-09!2;UBERON:0005281!1.71e-09!2;UBERON:0003135!7.37e-07!11;UBERON:0006947!9.12e-07!3;UBERON:0004054!9.12e-07!3;UBERON:0002300!9.64e-07!3|ontology_enrichment_uberon_v019=UBERON:0003714;5.96e-34;2!UBERON:0002046;1.71e-14;5!UBERON:0000013;1.71e-14;5!UBERON:0002410;1.71e-14;5!UBERON:0000010;1.16e-08;8|ontology_enrichment_uberon_v019_2=UBERON:0003714,5.04e-34,2;UBERON:0000013,1.60e-14,5;UBERON:0002410,1.60e-14,5;UBERON:0002046,1.83e-14,5;UBERON:0004117,1.83e-14,5;UBERON:0007689,1.83e-14,5;UBERON:0007123,1.83e-14,5;UBERON:0003091,1.83e-14,5;UBERON:0000010,1.12e-08,8;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.084762440336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67593475391973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14640342257068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:114654778..114654823,+}}
|DPIdataset=robustDPI
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|TSSclassifier=W
|UniProt=NA
|association_with_transcript=NA
|coexpression_cluster_id=C445
|description=CAGE_peak_at_chr1:114654778..114654823,+
|id=chr1:114654778..114654823,+
|ontology_enrichment_celltype=CL:0002536!1.12e-09!2;CL:0000815!1.22e-09!2;CL:0000792!1.22e-09!2;CL:0002677!1.22e-09!2;CL:0000242!1.33e-09!2;CL:0002549!1.71e-09!2;CL:0000898!7.70e-07!3
|ontology_enrichment_celltype_v019=CL:0000333;1.71e-14;5
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=UBERON:0007123;1.71e-14;5
|ontology_enrichment_disease=DOID:3112!3.75e-18!1;DOID:3193!8.69e-10!2;DOID:962!8.69e-10!2;DOID:3095!2.47e-07!22;DOID:2994!2.47e-07!22;DOID:305!3.02e-07!106;DOID:1192!6.14e-07!3;DOID:0050687!7.73e-07!143
|ontology_enrichment_disease_v019=DOID:3112;3.34e-66;1!DOID:3193;5.96e-34;2!DOID:962;5.96e-34;2!DOID:1192;3.66e-23;3!DOID:169;2.59e-12;6!DOID:171;6.34e-08;10!DOID:3093;8.14e-07;11
|ontology_enrichment_disease_v019_2=DOID:3112,4.66e-66,1;DOID:3193,5.04e-34,2;DOID:962,5.04e-34,2;DOID:1192,3.27e-23,3;DOID:169,2.45e-12,6;DOID:171,6.13e-08,10;DOID:3093,7.92e-07,11
|ontology_enrichment_uberon=UBERON:0001301!1.03e-17!1;UBERON:0003714!8.69e-10!2;UBERON:0003947!1.71e-09!2;UBERON:0005629!1.71e-09!2;UBERON:0005358!1.71e-09!2;UBERON:0001886!1.71e-09!2;UBERON:0004086!1.71e-09!2;UBERON:0005282!1.71e-09!2;UBERON:0005281!1.71e-09!2;UBERON:0003135!7.37e-07!11;UBERON:0006947!9.12e-07!3;UBERON:0004054!9.12e-07!3;UBERON:0002300!9.64e-07!3
|ontology_enrichment_uberon_v019=UBERON:0003714;5.96e-34;2!UBERON:0002046;1.71e-14;5!UBERON:0000013;1.71e-14;5!UBERON:0002410;1.71e-14;5!UBERON:0000010;1.16e-08;8
|ontology_enrichment_uberon_v019_2=UBERON:0003714,5.04e-34,2;UBERON:0000013,1.60e-14,5;UBERON:0002410,1.60e-14,5;UBERON:0002046,1.83e-14,5;UBERON:0004117,1.83e-14,5;UBERON:0007689,1.83e-14,5;UBERON:0007123,1.83e-14,5;UBERON:0003091,1.83e-14,5;UBERON:0000010,1.12e-08,8;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.084762440336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67593475391973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14640342257068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr1:114654778..114654823,+
}}

Revision as of 23:39, 11 September 2013

Short description:p@chr1:114654778..114654823, +
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr1:114654778..114654823, +
Coexpression cluster:C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
5
10
15
20
25
30




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data








Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr1:114654778..114654823,%2B&oldid=2839963"