FFCP PHASE1:Hg19::chr1:115212619..115212636,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=163259|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24748|TSSclassifier=S|UniProt=Q68D51|association_with_transcript=19bp_to_ENST00000393274_5end|coexpression_cluster_id=C3850|description=CAGE_peak_2_at_DENND2C_5end|id=chr1:115212619..115212636,-|ontology_enrichment_celltype=CL:0002076!4.38e-12!43;CL:0000223!5.25e-10!59;CL:0002251!3.95e-08!21|ontology_enrichment_celltype_v019=CL:0002251;8.12e-13;20!CL:0002623;1.59e-09;3!CL:0002076;3.94e-08;42!CL:0001014;1.26e-07;2!CL:0001016;1.26e-07;2|ontology_enrichment_celltype_v019_2=CL:0002251,6.05e-13,20;CL:0002076,1.42e-10,42;CL:0002623,1.31e-09,3;CL:0000076,3.75e-08,63;CL:0000223,7.89e-08,58;CL:0000066,9.79e-08,253;CL:0001014,1.25e-07,2;CL:0001016,1.25e-07,2|ontology_enrichment_development_v019=UBERON:0008814;7.24e-07;2!UBERON:0010056;7.24e-07;2|ontology_enrichment_disease=DOID:1749!5.05e-12!14|ontology_enrichment_disease_v019=DOID:1749;8.88e-34;14|ontology_enrichment_disease_v019_2=DOID:1749,5.82e-34,14|ontology_enrichment_uberon=UBERON:0000161!2.11e-07!35;UBERON:0004119!3.31e-07!169;UBERON:0000925!3.31e-07!169;UBERON:0006595!3.31e-07!169|ontology_enrichment_uberon_v019=UBERON:0000165;4.68e-15;28!UBERON:0000161;1.10e-13;19!UBERON:0000166;1.10e-13;19!UBERON:0000974;7.31e-13;6!UBERON:0003343;1.30e-12;4!UBERON:0004785;1.30e-12;4!UBERON:0000344;2.95e-10;20!UBERON:0003729;2.96e-10;13!UBERON:0001723;1.31e-09;3!UBERON:0001033;1.31e-09;3!UBERON:0002394;5.63e-07;4!UBERON:0003928;5.63e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000166,3.52e-17,22;UBERON:0000165,1.49e-14,29;UBERON:0000930,1.49e-14,29;UBERON:0000161,5.71e-13,36;UBERON:0003343,9.66e-13,4;UBERON:0004785,9.66e-13,4;UBERON:0000344,2.36e-10,20;UBERON:0003729,2.36e-10,13;UBERON:0001723,7.73e-10,3;UBERON:0001033,7.73e-10,3;UBERON:0010056,7.73e-10,3;UBERON:0003102,1.30e-08,99;UBERON:0000153,2.00e-08,62;UBERON:0007811,2.00e-08,62;UBERON:0000033,2.33e-08,56;UBERON:0000974,1.35e-07,10;UBERON:0001004,1.87e-07,74;UBERON:0001444,2.20e-07,49|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.154816123316076,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0,0,0.601633342410425,0.434021741431704,0,0,0,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0.612167784741805,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0,0.590129310341499,0,0.205601498999509,0,0,0.946895611469467,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0.766440987203842,0,0,0,0,0,0.150575119077773,0,0,0,0,2.01606743224732,0,1.01377082717959,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.130979075497713,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0.872188104285069,0,0,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0,0.211931901159562,0.300091096084402,0.309157587715317,0,0.18611685633159,0.337552664482532,0,0.757301322732344,0.0920498986422993,0.323292113637624,0,0,0.169560592310488,2.70565194428616,1.36373060295417,0.860413786167011,0.121973706129595,0.132529768321485,0.69716365721711,0.414644220061482,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0,0,0.474541238222193,0.404493924480493,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0.122988438543114,0,1.31700342490351,0,1.50793458617446,2.22212268380471,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,3.43394464837949,0,0,0.148631162288728,0.93733833986777,2.18376766658517,2.1266264586358,2.7763142037883,4.65014301622339,0,0.492663237895943,0.792435906119034,1.4512968087854,1.15295962733569,2.14612136824846,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.699810938274399,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0.358121926479791,0.112085143993527,1.18218456121156,0.646882724578552,0.385029108839245,0,0,0,0,0,0.749007023947182,0,1.24324654030811,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0,0,0.195801157462741,0,0.206768026122887,0.431428401637234,0.640365346820666,0.606255142892519,0,0,0,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0.116210378459959,0,0.40101294060657,2.67034867914099,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.0915694648183434,0.495056999523528,0,0,0,0,0,0,0.137836572484531,0,0,0.170453254832202,0,0.495854746082934,0.576570202095319,3.70076866234294,0.6069466851333,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0.673554789078584,3.3515113776789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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=163259 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24748 | |||
|TSSclassifier=S | |||
|UniProt=Q68D51 | |||
|association_with_transcript=19bp_to_ENST00000393274_5end | |||
|coexpression_cluster_id=C3850 | |||
|description=CAGE_peak_2_at_DENND2C_5end | |||
|id=chr1:115212619..115212636,- | |||
|ontology_enrichment_celltype=CL:0002076!4.38e-12!43;CL:0000223!5.25e-10!59;CL:0002251!3.95e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002251;8.12e-13;20!CL:0002623;1.59e-09;3!CL:0002076;3.94e-08;42!CL:0001014;1.26e-07;2!CL:0001016;1.26e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,6.05e-13,20;CL:0002076,1.42e-10,42;CL:0002623,1.31e-09,3;CL:0000076,3.75e-08,63;CL:0000223,7.89e-08,58;CL:0000066,9.79e-08,253;CL:0001014,1.25e-07,2;CL:0001016,1.25e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008814;7.24e-07;2!UBERON:0010056;7.24e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!5.05e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.88e-34;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.82e-34,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!2.11e-07!35;UBERON:0004119!3.31e-07!169;UBERON:0000925!3.31e-07!169;UBERON:0006595!3.31e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;4.68e-15;28!UBERON:0000161;1.10e-13;19!UBERON:0000166;1.10e-13;19!UBERON:0000974;7.31e-13;6!UBERON:0003343;1.30e-12;4!UBERON:0004785;1.30e-12;4!UBERON:0000344;2.95e-10;20!UBERON:0003729;2.96e-10;13!UBERON:0001723;1.31e-09;3!UBERON:0001033;1.31e-09;3!UBERON:0002394;5.63e-07;4!UBERON:0003928;5.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,3.52e-17,22;UBERON:0000165,1.49e-14,29;UBERON:0000930,1.49e-14,29;UBERON:0000161,5.71e-13,36;UBERON:0003343,9.66e-13,4;UBERON:0004785,9.66e-13,4;UBERON:0000344,2.36e-10,20;UBERON:0003729,2.36e-10,13;UBERON:0001723,7.73e-10,3;UBERON:0001033,7.73e-10,3;UBERON:0010056,7.73e-10,3;UBERON:0003102,1.30e-08,99;UBERON:0000153,2.00e-08,62;UBERON:0007811,2.00e-08,62;UBERON:0000033,2.33e-08,56;UBERON:0000974,1.35e-07,10;UBERON:0001004,1.87e-07,74;UBERON:0001444,2.20e-07,49 | |||
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| |||
|short_description=p2@DENND2C | |||
}} |
Revision as of 23:39, 11 September 2013
Short description: | p2@DENND2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_DENND2C_5end |
Coexpression cluster: | C3850_immature_epidermoid_esophagus_amniotic_oral_Small_glassy |
Association with transcript: | 19bp_to_ENST00000393274_5end |
EntrezGene: | DENND2C |
HGNC: | 24748 |
UniProt: | Q68D51 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 6.05e-13 | 20 |
endo-epithelial cell | 1.42e-10 | 42 |
acinar cell of salivary gland | 1.31e-09 | 3 |
squamous epithelial cell | 3.75e-08 | 63 |
endodermal cell | 7.89e-08 | 58 |
epithelial cell | 9.79e-08 | 253 |
CD1a-positive Langerhans cell | 1.25e-07 | 2 |
immature CD1a-positive Langerhans cell | 1.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
oral opening | 3.52e-17 | 22 |
mouth | 1.49e-14 | 29 |
stomodeum | 1.49e-14 | 29 |
orifice | 5.71e-13 | 36 |
mucosa of oral region | 9.66e-13 | 4 |
respiratory system mucosa | 9.66e-13 | 4 |
mucosa | 2.36e-10 | 20 |
mouth mucosa | 2.36e-10 | 13 |
tongue | 7.73e-10 | 3 |
gustatory system | 7.73e-10 | 3 |
future tongue | 7.73e-10 | 3 |
surface structure | 1.30e-08 | 99 |
anterior region of body | 2.00e-08 | 62 |
craniocervical region | 2.00e-08 | 62 |
head | 2.33e-08 | 56 |
neck | 1.35e-07 | 10 |
respiratory system | 1.87e-07 | 74 |
subdivision of head | 2.20e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.82e-34 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.