FFCP PHASE1:Hg19::chr1:20141763..20141778,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54546|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25978|TSSclassifier=S|UniProt=Q9NXI6|association_with_transcript=0bp_to_ENST00000375121,NM_019062,uc001bcr.2_5end|coexpression_cluster_id=C25|description=CAGE_peak_1_at_RNF186_5end|id=chr1:20141763..20141778,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002535;2.32e-07;2|ontology_enrichment_celltype_v019_2=CL:0002535,2.25e-07,2|ontology_enrichment_development_v019=UBERON:0001045;1.10e-13;1!UBERON:0007297;1.45e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.52e-28!27;UBERON:0005409!7.29e-26!35;UBERON:0000059!3.56e-16!11;UBERON:0004921!1.79e-15!129;UBERON:0004185!1.79e-15!129;UBERON:0001155!5.28e-13!9;UBERON:0001007!2.81e-12!155;UBERON:0001555!2.81e-12!155;UBERON:0007026!2.81e-12!155;UBERON:0002108!1.29e-11!14;UBERON:0004119!5.81e-11!169;UBERON:0000925!5.81e-11!169;UBERON:0006595!5.81e-11!169;UBERON:0006947!2.71e-10!3;UBERON:0004054!2.71e-10!3;UBERON:0001301!1.63e-08!1;UBERON:0001154!2.02e-08!1;UBERON:0001153!2.02e-08!1;UBERON:0001000!3.57e-08!1;UBERON:0005352!3.57e-08!1;UBERON:0005904!6.26e-08!4;UBERON:0003101!1.30e-07!22;UBERON:0000079!1.30e-07!22;UBERON:0009854!2.81e-07!23|ontology_enrichment_uberon_v019=UBERON:0000160;1.09e-43;17!UBERON:0005409;4.65e-34;22!UBERON:0000059;2.31e-28;11!UBERON:0002108;2.21e-23;4!UBERON:0001155;1.46e-22;9!UBERON:0004921;3.13e-21;33!UBERON:0001301;7.55e-14;1!UBERON:0001154;1.10e-13;1!UBERON:0001153;1.10e-13;1!UBERON:0009854;1.10e-13;1!UBERON:0004907;7.14e-11;5!UBERON:0001555;9.18e-09;54!UBERON:0001007;1.32e-07;81!UBERON:0006955;2.32e-07;2!UBERON:0004801;2.32e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.09e-43,17;UBERON:0005409,4.70e-30,25;UBERON:0000059,2.31e-28,11;UBERON:0002108,2.21e-23,4;UBERON:0001155,1.46e-22,9;UBERON:0001301,7.55e-14,1;UBERON:0001154,1.10e-13,1;UBERON:0001153,1.10e-13,1;UBERON:0001045,1.10e-13,1;UBERON:0004907,7.14e-11,5;UBERON:0004921,1.74e-07,118;UBERON:0006955,2.25e-07,2;UBERON:0004801,2.25e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47094550068939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63081397274754,1.51159648712566,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95261931078505,46.7055940577631,72.7125872471014,0,0,0,0,0,0,0,0,0,0.394584402849391,33.8774004936259,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7254001417827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.6857777430131,2.30800187793992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,10.0447459256045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.2545963214559,17.0476457193087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.2706372714394,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0.0898252021065869,0,0,0,0,0,0|short_description=p1@RNF186}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=54546 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25978 | |||
|TSSclassifier=S | |||
|UniProt=Q9NXI6 | |||
|association_with_transcript=0bp_to_ENST00000375121,NM_019062,uc001bcr.2_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_RNF186_5end | |||
|id=chr1:20141763..20141778,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;2.32e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.25e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.10e-13;1!UBERON:0007297;1.45e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.52e-28!27;UBERON:0005409!7.29e-26!35;UBERON:0000059!3.56e-16!11;UBERON:0004921!1.79e-15!129;UBERON:0004185!1.79e-15!129;UBERON:0001155!5.28e-13!9;UBERON:0001007!2.81e-12!155;UBERON:0001555!2.81e-12!155;UBERON:0007026!2.81e-12!155;UBERON:0002108!1.29e-11!14;UBERON:0004119!5.81e-11!169;UBERON:0000925!5.81e-11!169;UBERON:0006595!5.81e-11!169;UBERON:0006947!2.71e-10!3;UBERON:0004054!2.71e-10!3;UBERON:0001301!1.63e-08!1;UBERON:0001154!2.02e-08!1;UBERON:0001153!2.02e-08!1;UBERON:0001000!3.57e-08!1;UBERON:0005352!3.57e-08!1;UBERON:0005904!6.26e-08!4;UBERON:0003101!1.30e-07!22;UBERON:0000079!1.30e-07!22;UBERON:0009854!2.81e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.09e-43;17!UBERON:0005409;4.65e-34;22!UBERON:0000059;2.31e-28;11!UBERON:0002108;2.21e-23;4!UBERON:0001155;1.46e-22;9!UBERON:0004921;3.13e-21;33!UBERON:0001301;7.55e-14;1!UBERON:0001154;1.10e-13;1!UBERON:0001153;1.10e-13;1!UBERON:0009854;1.10e-13;1!UBERON:0004907;7.14e-11;5!UBERON:0001555;9.18e-09;54!UBERON:0001007;1.32e-07;81!UBERON:0006955;2.32e-07;2!UBERON:0004801;2.32e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.09e-43,17;UBERON:0005409,4.70e-30,25;UBERON:0000059,2.31e-28,11;UBERON:0002108,2.21e-23,4;UBERON:0001155,1.46e-22,9;UBERON:0001301,7.55e-14,1;UBERON:0001154,1.10e-13,1;UBERON:0001153,1.10e-13,1;UBERON:0001045,1.10e-13,1;UBERON:0004907,7.14e-11,5;UBERON:0004921,1.74e-07,118;UBERON:0006955,2.25e-07,2;UBERON:0004801,2.25e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47094550068939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.63081397274754,1.51159648712566,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95261931078505,46.7055940577631,72.7125872471014,0,0,0,0,0,0,0,0,0,0.394584402849391,33.8774004936259,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7254001417827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.6857777430131,2.30800187793992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12605604493237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,10.0447459256045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.2545963214559,17.0476457193087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.2706372714394,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p1@RNF186 | |||
}} |
Revision as of 02:45, 12 September 2013
Short description: | p1@RNF186 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RNF186_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000375121, NM_019062, uc001bcr.2_5end |
EntrezGene: | RNF186 |
HGNC: | 25978 |
UniProt: | Q9NXI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.09e-43 | 17 |
gastrointestinal system | 4.70e-30 | 25 |
large intestine | 2.31e-28 | 11 |
small intestine | 2.21e-23 | 4 |
colon | 1.46e-22 | 9 |
epididymis | 7.55e-14 | 1 |
vermiform appendix | 1.10e-13 | 1 |
caecum | 1.10e-13 | 1 |
midgut | 1.10e-13 | 1 |
lower digestive tract | 7.14e-11 | 5 |
subdivision of digestive tract | 1.74e-07 | 118 |
uterine epithelium | 2.25e-07 | 2 |
cervix epithelium | 2.25e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.