FFCP PHASE1:Hg19::chr1:244214577..244214593,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10472|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13030|TSSclassifier=S|UniProt=Q99592|association_with_transcript=0bp_to_ENST00000358704,ENST00000366538_5end|coexpression_cluster_id=C2575|description=CAGE_peak_1_at_ZNF238_5end|id=chr1:244214577..244214593,+|ontology_enrichment_celltype=CL:0002319!7.13e-12!25;CL:0000133!9.96e-09!59;CL:0000095!2.99e-07!17;CL:0000123!2.99e-07!17|ontology_enrichment_celltype_v019=CL:0002319;1.21e-11;25!CL:0000784;9.14e-08;3|ontology_enrichment_celltype_v019_2=CL:0002319,1.40e-11,25;CL:0000133,5.75e-08,59;CL:0000784,9.15e-08,3;CL:0000047,5.15e-07,8|ontology_enrichment_development_v019=UBERON:0006601;1.71e-10;82!UBERON:0006215;4.72e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.18e-48!94;UBERON:0001016!6.18e-48!94;UBERON:0001017!8.48e-46!82;UBERON:0005743!9.77e-46!86;UBERON:0001049!1.26e-39!57;UBERON:0005068!1.26e-39!57;UBERON:0006241!1.26e-39!57;UBERON:0007135!1.26e-39!57;UBERON:0000955!7.06e-37!69;UBERON:0006238!7.06e-37!69;UBERON:0003075!2.53e-34!86;UBERON:0007284!2.53e-34!86;UBERON:0002616!4.26e-33!59;UBERON:0002346!9.43e-32!90;UBERON:0002780!4.66e-28!41;UBERON:0001890!4.66e-28!41;UBERON:0006240!4.66e-28!41;UBERON:0003080!4.64e-27!42;UBERON:0007023!7.85e-27!115;UBERON:0004121!8.30e-27!169;UBERON:0001893!2.72e-26!34;UBERON:0002020!1.25e-25!34;UBERON:0003528!1.25e-25!34;UBERON:0000924!1.70e-25!173;UBERON:0006601!1.70e-25!173;UBERON:0003056!1.96e-25!61;UBERON:0002791!3.03e-25!33;UBERON:0001869!3.82e-25!32;UBERON:0000153!3.99e-24!129;UBERON:0007811!3.99e-24!129;UBERON:0000956!5.49e-24!25;UBERON:0000203!5.49e-24!25;UBERON:0000033!2.41e-23!123;UBERON:0002619!5.01e-22!22;UBERON:0001950!4.73e-20!20;UBERON:0003076!1.26e-13!15;UBERON:0003057!1.26e-13!15;UBERON:0004732!6.92e-13!13;UBERON:0004733!3.66e-12!12;UBERON:0002028!3.66e-12!12;UBERON:0007277!3.66e-12!12;UBERON:0002680!1.20e-09!9;UBERON:0001895!1.20e-09!9;UBERON:0010092!1.20e-09!9;UBERON:0002037!1.65e-07!6;UBERON:0006215!1.65e-07!6;UBERON:0000200!2.37e-07!6;UBERON:0001871!3.03e-07!7|ontology_enrichment_uberon_v019=UBERON:0000956;5.82e-41;25!UBERON:0000203;5.82e-41;25!UBERON:0002619;6.61e-40;22!UBERON:0001950;3.01e-36;20!UBERON:0001869;5.21e-36;32!UBERON:0001893;1.98e-35;34!UBERON:0002791;8.81e-33;32!UBERON:0003528;1.14e-30;34!UBERON:0002020;1.14e-30;34!UBERON:0000073;3.28e-29;53!UBERON:0002616;3.28e-29;53!UBERON:0002780;1.07e-26;41!UBERON:0001890;1.07e-26;41!UBERON:0000955;1.34e-21;68!UBERON:0001017;7.26e-19;75!UBERON:0001016;3.64e-18;83!UBERON:0004732;6.05e-17;13!UBERON:0004733;1.37e-15;12!UBERON:0002028;1.37e-15;12!UBERON:0002037;1.40e-12;6!UBERON:0000200;2.73e-12;6!UBERON:0001872;4.90e-11;5!UBERON:0002680;5.81e-11;9!UBERON:0001895;5.81e-11;9!UBERON:0001871;6.59e-11;6!UBERON:0000349;7.24e-11;5!UBERON:0002021;2.12e-10;5!UBERON:0007023;1.62e-07;114!UBERON:0001870;6.09e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.99e-55,89;UBERON:0001017,3.48e-53,81;UBERON:0000073,2.40e-51,53;UBERON:0002616,2.40e-51,53;UBERON:0000955,8.77e-49,68;UBERON:0006238,8.77e-49,68;UBERON:0001049,5.65e-48,56;UBERON:0005068,5.65e-48,56;UBERON:0006241,5.65e-48,56;UBERON:0007135,5.65e-48,56;UBERON:0000956,7.32e-41,25;UBERON:0000203,7.32e-41,25;UBERON:0002619,6.33e-40,22;UBERON:0001893,9.52e-40,34;UBERON:0001869,1.25e-39,32;UBERON:0003075,3.94e-38,82;UBERON:0007284,3.94e-38,82;UBERON:0002780,6.49e-37,41;UBERON:0001890,6.49e-37,41;UBERON:0003080,6.49e-37,41;UBERON:0006240,6.49e-37,41;UBERON:0002791,2.43e-36,32;UBERON:0001950,2.97e-36,20;UBERON:0002346,9.54e-36,86;UBERON:0003528,8.62e-34,34;UBERON:0002020,8.62e-34,34;UBERON:0003056,3.70e-31,61;UBERON:0010371,1.94e-30,104;UBERON:0004121,2.06e-29,171;UBERON:0000924,2.06e-29,171;UBERON:0006601,2.06e-29,171;UBERON:0010314,5.29e-20,132;UBERON:0007023,7.46e-19,114;UBERON:0011216,1.13e-18,223;UBERON:0004732,8.07e-17,13;UBERON:0004733,1.78e-15,12;UBERON:0002028,1.78e-15,12;UBERON:0007277,1.78e-15,12;UBERON:0002037,1.52e-12,6;UBERON:0006215,1.52e-12,6;UBERON:0000200,2.96e-12,6;UBERON:0003076,6.55e-12,15;UBERON:0003057,6.55e-12,15;UBERON:0001872,5.11e-11,5;UBERON:0002680,6.18e-11,9;UBERON:0001895,6.18e-11,9;UBERON:0010092,6.18e-11,9;UBERON:0001871,6.95e-11,6;UBERON:0000349,7.25e-11,5;UBERON:0002021,1.85e-10,5;UBERON:0000025,2.08e-07,192;UBERON:0001870,6.22e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,7.63350560076085,1.22400414746552,2.5076377718247,3.14859585844162,0.273748850145768,1.00434111675842,0,0,0,0,2.30297638858328,3.8704030829019,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,1.76171156811282,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10472 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13030 | |||
|TSSclassifier=S | |||
|UniProt=Q99592 | |||
|association_with_transcript=0bp_to_ENST00000358704,ENST00000366538_5end | |||
|coexpression_cluster_id=C2575 | |||
|description=CAGE_peak_1_at_ZNF238_5end | |||
|id=chr1:244214577..244214593,+ | |||
|ontology_enrichment_celltype=CL:0002319!7.13e-12!25;CL:0000133!9.96e-09!59;CL:0000095!2.99e-07!17;CL:0000123!2.99e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.21e-11;25!CL:0000784;9.14e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.40e-11,25;CL:0000133,5.75e-08,59;CL:0000784,9.15e-08,3;CL:0000047,5.15e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.71e-10;82!UBERON:0006215;4.72e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000956;5.82e-41;25!UBERON:0000203;5.82e-41;25!UBERON:0002619;6.61e-40;22!UBERON:0001950;3.01e-36;20!UBERON:0001869;5.21e-36;32!UBERON:0001893;1.98e-35;34!UBERON:0002791;8.81e-33;32!UBERON:0003528;1.14e-30;34!UBERON:0002020;1.14e-30;34!UBERON:0000073;3.28e-29;53!UBERON:0002616;3.28e-29;53!UBERON:0002780;1.07e-26;41!UBERON:0001890;1.07e-26;41!UBERON:0000955;1.34e-21;68!UBERON:0001017;7.26e-19;75!UBERON:0001016;3.64e-18;83!UBERON:0004732;6.05e-17;13!UBERON:0004733;1.37e-15;12!UBERON:0002028;1.37e-15;12!UBERON:0002037;1.40e-12;6!UBERON:0000200;2.73e-12;6!UBERON:0001872;4.90e-11;5!UBERON:0002680;5.81e-11;9!UBERON:0001895;5.81e-11;9!UBERON:0001871;6.59e-11;6!UBERON:0000349;7.24e-11;5!UBERON:0002021;2.12e-10;5!UBERON:0007023;1.62e-07;114!UBERON:0001870;6.09e-07;3 | |||
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| |||
|short_description=p1@ZNF238 | |||
}} |
Revision as of 04:39, 12 September 2013
Short description: | p1@ZNF238 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ZNF238_5end |
Coexpression cluster: | C2575_cerebellum_Neurons_occipital_duodenum_temporal_parietal_brain |
Association with transcript: | 0bp_to_ENST00000358704, ENST00000366538_5end |
EntrezGene: | ZNF238 |
HGNC: | 13030 |
UniProt: | Q99592 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.40e-11 | 25 |
neurectodermal cell | 5.75e-08 | 59 |
plasmacytoid dendritic cell | 9.15e-08 | 3 |
neuronal stem cell | 5.15e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.