FFCP PHASE1:Hg19::chr1:32169962..32169988,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1307|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2193|TSSclassifier=S|UniProt=A6NCT7,Q07092|association_with_transcript=-42bp_to_ENST00000373668,ENST00000373672_5end|description=CAGE_peak_8_at_COL16A1_5end|id=chr1:32169962..32169988,-|ontology_enrichment_celltype=CL:0000055!5.10e-26!180;CL:0000057!2.70e-16!75;CL:0002334!1.89e-11!12|ontology_enrichment_celltype_v019=CL:0002334;7.62e-21;12!CL:0002580;3.49e-13;3!CL:0002579;4.36e-13;3!CL:0000327;3.73e-12;15!CL:0000153;7.59e-11;9!CL:0000447;7.59e-11;9!CL:0000138;7.66e-11;6!CL:0002575;3.70e-09;2!CL:0000499;7.77e-08;28!CL:0002569;8.07e-07;6!CL:0000151;8.23e-07;36|ontology_enrichment_celltype_v019_2=CL:0002334,5.08e-21,12;CL:0002580,1.83e-13,3;CL:0002579,3.52e-13,3;CL:0000327,4.08e-12,15;CL:0000058,9.39e-11,6;CL:0000138,9.39e-11,6;CL:0000153,1.22e-10,9;CL:0000447,1.22e-10,9;CL:0002575,2.23e-09,2;CL:0000499,8.90e-08,28;CL:0000151,2.46e-07,36;CL:0000057,2.73e-07,76;CL:0002569,6.20e-07,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003688;4.26e-11;6!UBERON:0002358;4.26e-11;6!UBERON:0003684;4.26e-11;6!UBERON:0001178;4.26e-11;6!UBERON:0004457;4.70e-11;9!UBERON:0000042;4.70e-11;9!UBERON:0003104;1.32e-09;7!UBERON:0009142;1.32e-09;7!UBERON:0005406;3.70e-09;2!UBERON:0002331;6.30e-07;10!UBERON:0003422;8.07e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.34e-11,6;UBERON:0002358,2.34e-11,6;UBERON:0003684,2.34e-11,6;UBERON:0001178,2.34e-11,6;UBERON:0005406,1.82e-09,2;UBERON:0004457,2.88e-08,12;UBERON:0000042,2.88e-08,12;UBERON:0002331,5.10e-07,10;UBERON:0000358,5.10e-07,10;UBERON:0000307,5.10e-07,10;UBERON:0000091,5.10e-07,10;UBERON:0000087,5.10e-07,10;UBERON:0007010,5.10e-07,10;UBERON:0007806,5.10e-07,10;UBERON:0008780,5.10e-07,10;UBERON:0005728,5.10e-07,10;UBERON:0003422,6.20e-07,6|phase1_expression=0.54503513781167,0.642301571672949,1.9733616573436,0,0.446961094427288,1.74467704820074,0,0.631719873426831,0,0,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.44575660953827,1.00267582127178,1.30361867064741,0,2.43317435151318,0.0945348171640679,0.221729397462564,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,1.05927344650575,0.860509862246441,0,0.560677600142307,0,0.49333509683432,0.311211035399766,0.134710672069688,0.163461903113459,0.302714855289863,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0.204154171254893,0.245668634623536,0.206651562351531,0,0.494533858557114,0,0.718618141816238,0,0,0,0,1.22595118319608,0.45071417671979,0.113432183160021,0.717558542755448,0.427114777637135,0.211931901159562,0.600182192168805,0,0.772921620136887,0.18611685633159,0.675105328965065,0.779496041289589,0.757301322732344,0.184099797284599,0,1.06502877754984,0.10075209822764,0.339121184620975,0,0,0,0.243947412259191,0,0.464775771478074,0.310983165046111,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,2.84397774667111,0,0,0.26593811658487,0,1.02882949704857,0,0.532844358032199,0.428933980974443,1.62786481617433,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,6.89171615004683,0,0.289562613335158,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.623912584592421,0,1.26161932027148,0.234282829985426,0.300946099727719,0,1.03473071292505,3.32112799267718,0.737476674166813,0,1.95801157462741,2.40200396667599,0,0,0,0.303127571446259,0,0,2.48107807818777,3.37616341233737,1.96462066103151,1.53766979106841,2.04682899626681,2.57366273829772,2.96836132889982,0.154209693802656,1.06537035187876,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0,0.229628896329213,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0,0,1.14853107599234,0,1.6068392984416,0,0,0.307007349452259,0.275673144969061,1.39646318328756,0.435050081742686,0.255679882248303,1.15741646340759,0,0,0,0.2023155617111,0,0.31481234683064,0,0,0,0,0.55597265731176,0.572499546967965,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0.359744915166629,0,0.589062011728432,0,0,0,0,0.974853958525138,0,0.272999822815972,0.707027159768564,0,0.551365343546124,1.32687795048244,0,0.578775534266688,0,0.811641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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1307 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2193 | |||
|TSSclassifier=S | |||
|UniProt=A6NCT7,Q07092 | |||
|association_with_transcript=-42bp_to_ENST00000373668,ENST00000373672_5end | |||
|description=CAGE_peak_8_at_COL16A1_5end | |||
|id=chr1:32169962..32169988,- | |||
|ontology_enrichment_celltype=CL:0000055!5.10e-26!180;CL:0000057!2.70e-16!75;CL:0002334!1.89e-11!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;7.62e-21;12!CL:0002580;3.49e-13;3!CL:0002579;4.36e-13;3!CL:0000327;3.73e-12;15!CL:0000153;7.59e-11;9!CL:0000447;7.59e-11;9!CL:0000138;7.66e-11;6!CL:0002575;3.70e-09;2!CL:0000499;7.77e-08;28!CL:0002569;8.07e-07;6!CL:0000151;8.23e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.08e-21,12;CL:0002580,1.83e-13,3;CL:0002579,3.52e-13,3;CL:0000327,4.08e-12,15;CL:0000058,9.39e-11,6;CL:0000138,9.39e-11,6;CL:0000153,1.22e-10,9;CL:0000447,1.22e-10,9;CL:0002575,2.23e-09,2;CL:0000499,8.90e-08,28;CL:0000151,2.46e-07,36;CL:0000057,2.73e-07,76;CL:0002569,6.20e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.26e-11;6!UBERON:0002358;4.26e-11;6!UBERON:0003684;4.26e-11;6!UBERON:0001178;4.26e-11;6!UBERON:0004457;4.70e-11;9!UBERON:0000042;4.70e-11;9!UBERON:0003104;1.32e-09;7!UBERON:0009142;1.32e-09;7!UBERON:0005406;3.70e-09;2!UBERON:0002331;6.30e-07;10!UBERON:0003422;8.07e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.34e-11,6;UBERON:0002358,2.34e-11,6;UBERON:0003684,2.34e-11,6;UBERON:0001178,2.34e-11,6;UBERON:0005406,1.82e-09,2;UBERON:0004457,2.88e-08,12;UBERON:0000042,2.88e-08,12;UBERON:0002331,5.10e-07,10;UBERON:0000358,5.10e-07,10;UBERON:0000307,5.10e-07,10;UBERON:0000091,5.10e-07,10;UBERON:0000087,5.10e-07,10;UBERON:0007010,5.10e-07,10;UBERON:0007806,5.10e-07,10;UBERON:0008780,5.10e-07,10;UBERON:0005728,5.10e-07,10;UBERON:0003422,6.20e-07,6 | |||
|phase1_expression=0.54503513781167,0.642301571672949,1.9733616573436,0,0.446961094427288,1.74467704820074,0,0.631719873426831,0,0,0,0.218441372130172,0,0.123766352960047,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.44575660953827,1.00267582127178,1.30361867064741,0,2.43317435151318,0.0945348171640679,0.221729397462564,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.886413581652058,1.05927344650575,0.860509862246441,0,0.560677600142307,0,0.49333509683432,0.311211035399766,0.134710672069688,0.163461903113459,0.302714855289863,0,0.234321431833797,0.312160076830321,0,0,0,0,0,0.204154171254893,0.245668634623536,0.206651562351531,0,0.494533858557114,0,0.718618141816238,0,0,0,0,1.22595118319608,0.45071417671979,0.113432183160021,0.717558542755448,0.427114777637135,0.211931901159562,0.600182192168805,0,0.772921620136887,0.18611685633159,0.675105328965065,0.779496041289589,0.757301322732344,0.184099797284599,0,1.06502877754984,0.10075209822764,0.339121184620975,0,0,0,0.243947412259191,0,0.464775771478074,0.310983165046111,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,2.84397774667111,0,0,0.26593811658487,0,1.02882949704857,0,0.532844358032199,0.428933980974443,1.62786481617433,0.823240336780769,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,6.89171615004683,0,0.289562613335158,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.623912584592421,0,1.26161932027148,0.234282829985426,0.300946099727719,0,1.03473071292505,3.32112799267718,0.737476674166813,0,1.95801157462741,2.40200396667599,0,0,0,0.303127571446259,0,0,2.48107807818777,3.37616341233737,1.96462066103151,1.53766979106841,2.04682899626681,2.57366273829772,2.96836132889982,0.154209693802656,1.06537035187876,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0,0.229628896329213,0.182091168006717,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0,0,1.14853107599234,0,1.6068392984416,0,0,0.307007349452259,0.275673144969061,1.39646318328756,0.435050081742686,0.255679882248303,1.15741646340759,0,0,0,0.2023155617111,0,0.31481234683064,0,0,0,0,0.55597265731176,0.572499546967965,0.372158369359667,0.316379424718726,0,0.255897791311334,0,0,0,0.359744915166629,0,0.589062011728432,0,0,0,0,0.974853958525138,0,0.272999822815972,0.707027159768564,0,0.551365343546124,1.32687795048244,0,0.578775534266688,0,0.811641507850816,0.6196469961995,0.281695602532241,0.286822704408103,0.196498082026242,0,0,1.05553817648832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824019371133798,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0,0,0,0.692552326534174,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0.19871461170299,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0.713987523454252,0.577901179803038,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,1.80149941771202,0,0,0.164831716762333,0.202210631562555,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0.367182116944987,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.447764408660622,0.934853239388898,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,1.24349760466224,0.147855149989634,0,0.449803112163605,0.465788870628778,0,0.265841714557995,0,0.450772826991655,0,0,0.181848659202559,0.214821114084977,0.928067519756987,0,0,1.71697852591396,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.07358071889661,0,0.371807292777007,1.11728983594649,0.954013051960256,0,0,1.05802783107205,1.2249819094128,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.762764190934334,0,10.5425597721626,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0.314231179832004,0,2.73947616152849,0,0,0.214429632529969,0,0,0,0,0.207216164163037,0,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0.655678681511872,0,0.245148321753905,0,0,0,0.4226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| |||
|short_description=p8@COL16A1 | |||
}} |
Revision as of 05:16, 12 September 2013
Short description: | p8@COL16A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_COL16A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -42bp_to_ENST00000373668, ENST00000373672_5end |
EntrezGene: | COL16A1 |
HGNC: | 2193 |
UniProt: | A6NCT7Q07092 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.08e-21 | 12 |
preadipocyte of the breast | 1.83e-13 | 3 |
omentum preadipocyte | 3.52e-13 | 3 |
extracellular matrix secreting cell | 4.08e-12 | 15 |
chondroblast | 9.39e-11 | 6 |
chondrocyte | 9.39e-11 | 6 |
GAG secreting cell | 1.22e-10 | 9 |
carbohydrate secreting cell | 1.22e-10 | 9 |
central nervous system pericyte | 2.23e-09 | 2 |
stromal cell | 8.90e-08 | 28 |
secretory cell | 2.46e-07 | 36 |
fibroblast | 2.73e-07 | 76 |
mesenchymal stem cell of umbilical cord | 6.20e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.34e-11 | 6 |
peritoneum | 2.34e-11 | 6 |
abdominal cavity | 2.34e-11 | 6 |
visceral peritoneum | 2.34e-11 | 6 |
perirenal fat | 1.82e-09 | 2 |
cavity lining | 2.88e-08 | 12 |
serous membrane | 2.88e-08 | 12 |
umbilical cord | 5.10e-07 | 10 |
blastocyst | 5.10e-07 | 10 |
blastula | 5.10e-07 | 10 |
bilaminar disc | 5.10e-07 | 10 |
inner cell mass | 5.10e-07 | 10 |
cleaving embryo | 5.10e-07 | 10 |
connecting stalk | 5.10e-07 | 10 |
inner cell mass derived epiblast | 5.10e-07 | 10 |
extraembryonic mesoderm | 5.10e-07 | 10 |
mesenchyme of umbilical cord | 6.20e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.