FFCP PHASE1:Hg19::chr1:56990149..56990181,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C666|description=CAGE_peak_at_chr1:56990149..56990181,-|id=chr1:56990149..56990181,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000135;1.03e-16;3!CL:0000388;1.03e-16;3!CL:0002559;1.96e-09;5!CL:0000214;4.82e-08;3!CL:0000197;5.49e-08;6!CL:0000098;5.49e-08;6!CL:0002167;5.49e-08;6!CL:0000346;2.42e-07;3!CL:1000428;2.42e-07;3|ontology_enrichment_celltype_v019_2=CL:0000135,1.01e-16,3;CL:0000388,1.01e-16,3;CL:0002559,2.05e-09,5;CL:0000197,3.87e-08,6;CL:0000098,3.87e-08,6;CL:0002167,3.87e-08,6;CL:0000136,3.99e-08,15;CL:0000214,4.75e-08,3;CL:0000346,2.50e-07,3;CL:1000428,2.50e-07,3|ontology_enrichment_development_v019=UBERON:0007297;4.07e-11;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.93e-11!115;UBERON:0000475!4.12e-10!365|ontology_enrichment_uberon_v019=UBERON:0007846;1.03e-16;3!UBERON:0000043;1.03e-16;3!UBERON:0007845;1.03e-16;3!UBERON:0005406;5.78e-11;2!UBERON:0002073;1.96e-09;5!UBERON:0006915;4.82e-08;3!UBERON:0007616;4.82e-08;3!UBERON:0002217;4.82e-08;3!UBERON:0002018;4.82e-08;3!UBERON:0006947;1.10e-07;3!UBERON:0004054;1.10e-07;3!UBERON:0000412;2.42e-07;3!UBERON:0001992;2.42e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.01e-16,3;UBERON:0000043,1.01e-16,3;UBERON:0007845,1.01e-16,3;UBERON:0005406,3.17e-11,2;UBERON:0002073,2.05e-09,5;UBERON:0005086,2.05e-09,5;UBERON:0006915,4.75e-08,3;UBERON:0007616,4.75e-08,3;UBERON:0002217,4.75e-08,3;UBERON:0002018,4.75e-08,3;UBERON:0006947,1.59e-07,3;UBERON:0004054,1.59e-07,3;UBERON:0000412,2.50e-07,3;UBERON:0001992,2.50e-07,3|phase1_expression=0.726713517082227,1.71280419112787,0.140954404095971,2.00146596706261,0.446961094427288,1.74467704820074,0,0.631719873426831,0.522371256399677,0.245733936501509,0,0,0,0.495065411840187,0.662794751455832,0,0,0,0,0.123121058076788,0.408001382488506,0,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0.145398238779565,0,0,0,1.23350366406548,0,0,0,0,0,0,0,0,0,0,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,2.60723734129483,0,0,0,0.443458794925128,0.263504357079378,0.261958150995425,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0,0,0,0,0,0,0,0,0.326923806226917,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0,0.309977343527296,0,1.7308685049499,0,0,0,0.500474079487857,0,0.438977620880838,0.612975591598039,1.65261864797256,0,0.179389635688862,1.06778694409284,0.847727604638247,0,0.412210116953756,0.515281080091258,0.37223371266318,0.168776332241266,0.0974370051611986,0.504867548488229,0.828449087780694,1.77810662500693,0.710019185033229,0.302256294682921,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,1.56449532329816,1.28648187638577,0,0.464367928031979,2.16563844500876,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0.723906533337896,0.61642896765115,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0.858840442033979,1.00034104211935,0,1.87173775377726,3.21172179834891,1.57702415033935,0.234282829985426,0,0,0,0.664225598535437,0,0.0868836144680828,0,0.343143423810856,0,0,0,0.303127571446259,0,0.604780586659361,0.496215615637554,0.306923946576125,1.40330047216537,0.384417447767103,0.511707249066704,0.160853921143607,2.96836132889982,0.462629081407967,0,0,0,0,0,0,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0,0,1.46139224653261,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.107420244868274,0.870100163485371,0,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0,0,1.28381696410176,0.318203247925937,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0.424216295861138,0,0,0.66343897524122,0.438450885253763,0,1.31178950409327,0,0.6196469961995,0,0,0,0,0,7.81098250601357,3.62224382255892,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0.586032717087576,0,0,0,0,0.296964680832639,0,0,0.281338832821026,0,0,0,0.398495976502139,0.276283915531148,0,0,0.246169610922139,0,0,0,0,0.986434056369336,0,0,1.93866549219044,0.371072392647405,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.615602068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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C666 | |||
|description=CAGE_peak_at_chr1:56990149..56990181,- | |||
|id=chr1:56990149..56990181,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.03e-16;3!CL:0000388;1.03e-16;3!CL:0002559;1.96e-09;5!CL:0000214;4.82e-08;3!CL:0000197;5.49e-08;6!CL:0000098;5.49e-08;6!CL:0002167;5.49e-08;6!CL:0000346;2.42e-07;3!CL:1000428;2.42e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.01e-16,3;CL:0000388,1.01e-16,3;CL:0002559,2.05e-09,5;CL:0000197,3.87e-08,6;CL:0000098,3.87e-08,6;CL:0002167,3.87e-08,6;CL:0000136,3.99e-08,15;CL:0000214,4.75e-08,3;CL:0000346,2.50e-07,3;CL:1000428,2.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.07e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.93e-11!115;UBERON:0000475!4.12e-10!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.03e-16;3!UBERON:0000043;1.03e-16;3!UBERON:0007845;1.03e-16;3!UBERON:0005406;5.78e-11;2!UBERON:0002073;1.96e-09;5!UBERON:0006915;4.82e-08;3!UBERON:0007616;4.82e-08;3!UBERON:0002217;4.82e-08;3!UBERON:0002018;4.82e-08;3!UBERON:0006947;1.10e-07;3!UBERON:0004054;1.10e-07;3!UBERON:0000412;2.42e-07;3!UBERON:0001992;2.42e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.01e-16,3;UBERON:0000043,1.01e-16,3;UBERON:0007845,1.01e-16,3;UBERON:0005406,3.17e-11,2;UBERON:0002073,2.05e-09,5;UBERON:0005086,2.05e-09,5;UBERON:0006915,4.75e-08,3;UBERON:0007616,4.75e-08,3;UBERON:0002217,4.75e-08,3;UBERON:0002018,4.75e-08,3;UBERON:0006947,1.59e-07,3;UBERON:0004054,1.59e-07,3;UBERON:0000412,2.50e-07,3;UBERON:0001992,2.50e-07,3 | |||
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| |||
|short_description=p@chr1:56990149..56990181,- | |||
}} |
Revision as of 06:13, 12 September 2013
Short description: | p@chr1:56990149..56990181, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:56990149..56990181, - |
Coexpression cluster: | C666_tenocyte_Synoviocyte_Fibroblast_Chondrocyte_Nucleus_normal_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.01e-16 | 3 |
tendon cell | 1.01e-16 | 3 |
hair follicle cell | 2.05e-09 | 5 |
receptor cell | 3.87e-08 | 6 |
sensory epithelial cell | 3.87e-08 | 6 |
olfactory epithelial cell | 3.87e-08 | 6 |
fat cell | 3.99e-08 | 15 |
synovial cell | 4.75e-08 | 3 |
hair follicle dermal papilla cell | 2.50e-07 | 3 |
stem cell of epidermis | 2.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.01e-16 | 3 |
tendon | 1.01e-16 | 3 |
regular connective tissue | 1.01e-16 | 3 |
perirenal fat | 3.17e-11 | 2 |
hair follicle | 2.05e-09 | 5 |
hair follicle placode | 2.05e-09 | 5 |
stratified squamous epithelium | 4.75e-08 | 3 |
layer of synovial tissue | 4.75e-08 | 3 |
synovial joint | 4.75e-08 | 3 |
synovial membrane of synovial joint | 4.75e-08 | 3 |
male genital duct | 1.59e-07 | 3 |
internal male genitalia | 1.59e-07 | 3 |
dermal papilla | 2.50e-07 | 3 |
papillary layer of dermis | 2.50e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.