FFCP PHASE1:Hg19::chr1:68516361..68516380,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9077|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=687|TSSclassifier=S|UniProt=O95661|association_with_transcript=79bp_to_ENST00000395201,NM_004675_5end|coexpression_cluster_id=C3994|description=CAGE_peak_3_at_DIRAS3_5end|id=chr1:68516361..68516380,-|ontology_enrichment_celltype=CL:0000183!1.65e-15!59;CL:0000055!7.31e-15!180;CL:0000187!4.74e-14!54;CL:0000680!4.97e-14!57;CL:0000056!4.97e-14!57;CL:0000355!4.97e-14!57;CL:0000393!5.49e-13!60;CL:0000211!5.49e-13!60;CL:0000192!1.81e-12!42;CL:0000514!1.81e-12!42;CL:0000359!1.02e-10!32;CL:0000222!1.55e-09!119;CL:0000057!4.10e-09!75|ontology_enrichment_celltype_v019=CL:0002595;8.96e-13;5!CL:0000359;5.90e-10;32!CL:0002494;6.31e-07;16|ontology_enrichment_celltype_v019_2=CL:0002595,2.20e-13,5;CL:0000359,2.49e-10,32;CL:0000192,6.08e-07,43;CL:0000514,6.08e-07,43|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000477!1.42e-17!286;UBERON:0007023!1.84e-17!115;UBERON:0000481!5.61e-17!347;UBERON:0004111!6.81e-17!241;UBERON:0000483!8.74e-17!309;UBERON:0000119!1.07e-16!312;UBERON:0000025!1.36e-15!194;UBERON:0000475!1.21e-13!365;UBERON:0002385!2.88e-13!63;UBERON:0001015!2.88e-13!63;UBERON:0000383!2.88e-13!63;UBERON:0004872!5.29e-13!84;UBERON:0001134!9.59e-13!61;UBERON:0002036!9.59e-13!61;UBERON:0003082!9.59e-13!61;UBERON:0004290!4.58e-12!70;UBERON:0003914!5.91e-12!118;UBERON:0000914!2.77e-11!83;UBERON:0002329!2.77e-11!83;UBERON:0003077!2.77e-11!83;UBERON:0003059!2.77e-11!83;UBERON:0007282!2.77e-11!83;UBERON:0009618!2.77e-11!83;UBERON:0007285!2.77e-11!83;UBERON:0001009!3.38e-11!113;UBERON:0002049!4.78e-11!79;UBERON:0007798!4.78e-11!79;UBERON:0000467!5.86e-11!625;UBERON:0005256!5.87e-11!143;UBERON:0000480!7.77e-11!626;UBERON:0004535!1.40e-10!110;UBERON:0000468!1.84e-10!659;UBERON:0000490!4.46e-10!138;UBERON:0003075!3.59e-09!86;UBERON:0007284!3.59e-09!86;UBERON:0001981!3.87e-09!60;UBERON:0007500!3.87e-09!60;UBERON:0004537!3.87e-09!60;UBERON:0006965!3.87e-09!60;UBERON:0000486!4.05e-09!82;UBERON:0000055!5.08e-09!69;UBERON:0007100!6.63e-09!27;UBERON:0001637!1.34e-08!42;UBERON:0003509!1.34e-08!42;UBERON:0004572!1.34e-08!42;UBERON:0002346!1.42e-08!90;UBERON:0000948!2.93e-08!24;UBERON:0005498!2.93e-08!24;UBERON:0004140!2.93e-08!24;UBERON:0009881!2.93e-08!24;UBERON:0004141!2.93e-08!24;UBERON:0003084!2.93e-08!24;UBERON:0007005!2.93e-08!24;UBERON:0004139!2.93e-08!24;UBERON:0004291!2.93e-08!24;UBERON:0000033!8.54e-08!123;UBERON:0000153!1.20e-07!129;UBERON:0007811!1.20e-07!129;UBERON:0005743!1.51e-07!86;UBERON:0000923!1.53e-07!604;UBERON:0005291!1.53e-07!604;UBERON:0006598!1.53e-07!604;UBERON:0002532!1.53e-07!604;UBERON:0002050!1.93e-07!605;UBERON:0005423!1.93e-07!605;UBERON:0001017!2.63e-07!82;UBERON:0000922!5.16e-07!612;UBERON:0000073!7.14e-07!94;UBERON:0001016!7.14e-07!94|ontology_enrichment_uberon_v019=UBERON:0003834;8.96e-13;5!UBERON:0001533;8.96e-13;5!UBERON:0003513;1.47e-12;7!UBERON:0002119;3.25e-10;4!UBERON:0000992;5.57e-09;13!UBERON:0007100;2.74e-08;25!UBERON:0000948;8.95e-08;22!UBERON:0000007;5.65e-07;2!UBERON:0000369;5.94e-07;4!UBERON:0002435;5.94e-07;4!UBERON:0000204;5.94e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.46e-14,117;UBERON:0004872,2.17e-13,83;UBERON:0003834,2.20e-13,5;UBERON:0001533,2.20e-13,5;UBERON:0003513,4.75e-13,7;UBERON:0004111,3.08e-11,240;UBERON:0001009,3.91e-11,112;UBERON:0007100,6.26e-11,27;UBERON:0004535,1.31e-10,109;UBERON:0000025,1.32e-10,192;UBERON:0000948,1.64e-10,24;UBERON:0005498,1.64e-10,24;UBERON:0004140,1.64e-10,24;UBERON:0009881,1.64e-10,24;UBERON:0004141,1.64e-10,24;UBERON:0003084,1.64e-10,24;UBERON:0007005,1.64e-10,24;UBERON:0004139,1.64e-10,24;UBERON:0004291,1.64e-10,24;UBERON:0002119,5.11e-10,4;UBERON:0000055,1.46e-09,68;UBERON:0007500,3.87e-09,59;UBERON:0001981,3.87e-09,59;UBERON:0004537,3.87e-09,59;UBERON:0006965,3.87e-09,59;UBERON:0000992,6.39e-09,13;UBERON:0002049,9.50e-09,78;UBERON:0007798,9.50e-09,78;UBERON:0001637,1.83e-08,42;UBERON:0003509,1.83e-08,42;UBERON:0004572,1.83e-08,42;UBERON:0000007,5.62e-07,2;UBERON:0000369,6.67e-07,4;UBERON:0002435,6.67e-07,4;UBERON:0000204,6.67e-07,4;UBERON:0010082,6.67e-07,4|phase1_expression=0,0,0,0,0,0,0,1.89515962028049,0,2.94880723801811,0,0,0,0.123766352960047,0,0,0.602694528023977,1.46062018077475,0,0.246242116153576,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.263504357079378,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,2.84613010149368,0.33472061276467,2.01414658554573,0,0,0,0,0.625098097988558,0,0.112611480483322,0,0,0.732806975721629,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,1.4186735287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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9077 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=687 | |||
|TSSclassifier=S | |||
|UniProt=O95661 | |||
|association_with_transcript=79bp_to_ENST00000395201,NM_004675_5end | |||
|coexpression_cluster_id=C3994 | |||
|description=CAGE_peak_3_at_DIRAS3_5end | |||
|id=chr1:68516361..68516380,- | |||
|ontology_enrichment_celltype=CL:0000183!1.65e-15!59;CL:0000055!7.31e-15!180;CL:0000187!4.74e-14!54;CL:0000680!4.97e-14!57;CL:0000056!4.97e-14!57;CL:0000355!4.97e-14!57;CL:0000393!5.49e-13!60;CL:0000211!5.49e-13!60;CL:0000192!1.81e-12!42;CL:0000514!1.81e-12!42;CL:0000359!1.02e-10!32;CL:0000222!1.55e-09!119;CL:0000057!4.10e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0002595;8.96e-13;5!CL:0000359;5.90e-10;32!CL:0002494;6.31e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,2.20e-13,5;CL:0000359,2.49e-10,32;CL:0000192,6.08e-07,43;CL:0000514,6.08e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@DIRAS3 | |||
}} |
Revision as of 06:37, 12 September 2013
Short description: | p3@DIRAS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_DIRAS3_5end |
Coexpression cluster: | C3994_pituitary_ovary_putamen_pancreas_glioblastoma_Smooth_gall |
Association with transcript: | 79bp_to_ENST00000395201, NM_004675_5end |
EntrezGene: | DIRAS3 |
HGNC: | 687 |
UniProt: | O95661 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 2.20e-13 | 5 |
vascular associated smooth muscle cell | 2.49e-10 | 32 |
smooth muscle cell | 6.08e-07 | 43 |
smooth muscle myoblast | 6.08e-07 | 43 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.