FFCP PHASE1:Hg19::chr20:42187622..42187623,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10110|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13900|TSSclassifier=S|UniProt=Q9HBY8|association_with_transcript=-11bp_to_NM_170693_5end|description=CAGE_peak_7_at_SGK2_5end|id=chr20:42187622..42187623,+|ontology_enrichment_celltype=CL:0000181!2.10e-14!12;CL:0000417!2.10e-14!12;CL:0000668!2.10e-14!12;CL:0000414!2.10e-14!12;CL:0000412!2.10e-14!12;CL:0000182!2.10e-14!12;CL:0000313!3.83e-08!1;CL:0000223!4.16e-08!59;CL:0002563!9.46e-08!4|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003918;2.38e-27;10!UBERON:0007687;2.38e-27;10!UBERON:0003104;6.23e-10;31|ontology_enrichment_disease=DOID:4468!5.92e-15!2;DOID:299!1.24e-12!25;DOID:305!4.77e-10!106;DOID:2152!3.83e-08!1;DOID:0050687!8.95e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!4.28e-16!55;UBERON:0005173!4.28e-16!55;UBERON:0008835!1.10e-14!22;UBERON:0003894!1.10e-14!22;UBERON:0002417!2.71e-14!61;UBERON:0000916!2.71e-14!61;UBERON:0009854!5.17e-14!23;UBERON:0005177!1.43e-13!107;UBERON:0007499!7.94e-13!25;UBERON:0009497!7.94e-13!25;UBERON:0000015!7.94e-13!25;UBERON:0002423!7.94e-13!25;UBERON:0006235!7.94e-13!25;UBERON:0004161!7.94e-13!25;UBERON:0002107!9.18e-13!19;UBERON:0006925!9.18e-13!19;UBERON:0008836!9.18e-13!19;UBERON:0009856!2.66e-12!26;UBERON:0006947!4.12e-10!3;UBERON:0004054!4.12e-10!3;UBERON:0000466!1.89e-09!126;UBERON:0009569!2.16e-09!113;UBERON:0005057!3.47e-09!26;UBERON:0004921!4.27e-09!129;UBERON:0004185!4.27e-09!129;UBERON:0003929!5.73e-09!54;UBERON:0002113!6.79e-09!27;UBERON:0003918!6.79e-09!27;UBERON:0005095!6.79e-09!27;UBERON:0007687!6.79e-09!27;UBERON:0000949!7.35e-09!45;UBERON:0001000!2.50e-08!1;UBERON:0005352!2.50e-08!1;UBERON:0004911!3.83e-08!1;UBERON:0001301!4.41e-08!1;UBERON:0001041!5.19e-08!98;UBERON:0005904!8.53e-08!4;UBERON:0001242!9.46e-08!4;UBERON:0001262!9.46e-08!4;UBERON:0004786!9.46e-08!4;UBERON:0004808!9.46e-08!4;UBERON:0001277!9.46e-08!4;UBERON:0002365!1.29e-07!31;UBERON:0002330!1.29e-07!31;UBERON:0000489!2.03e-07!32;UBERON:0001007!4.17e-07!155;UBERON:0001555!4.17e-07!155;UBERON:0007026!4.17e-07!155;UBERON:0003104!7.50e-07!238;UBERON:0009142!7.50e-07!238;UBERON:0005911!8.92e-07!82|ontology_enrichment_uberon_v019=UBERON:0002113;3.97e-12;24!UBERON:0011143;3.97e-12;24!UBERON:0000489;3.10e-10;29!UBERON:0006554;6.23e-10;30!UBERON:0001008;6.23e-10;30!UBERON:0001264;6.13e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.91e-11,26;UBERON:0003918,2.91e-11,26;UBERON:0011143,2.91e-11,26;UBERON:0005095,2.91e-11,26;UBERON:0007687,2.91e-11,26;UBERON:0000489,1.25e-09,31;UBERON:0001264,5.73e-08,10;UBERON:0005177,6.45e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.404421263125109,0,0,0,0,0,0,0,0,0,0,0,1.10327990218877,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29556554731173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.269475606319761,0,0,0,0,0,0|short_description=p7@SGK2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10110 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13900 | |||
|TSSclassifier=S | |||
|UniProt=Q9HBY8 | |||
|association_with_transcript=-11bp_to_NM_170693_5end | |||
|description=CAGE_peak_7_at_SGK2_5end | |||
|id=chr20:42187622..42187623,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.10e-14!12;CL:0000417!2.10e-14!12;CL:0000668!2.10e-14!12;CL:0000414!2.10e-14!12;CL:0000412!2.10e-14!12;CL:0000182!2.10e-14!12;CL:0000313!3.83e-08!1;CL:0000223!4.16e-08!59;CL:0002563!9.46e-08!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.38e-27;10!UBERON:0007687;2.38e-27;10!UBERON:0003104;6.23e-10;31 | |||
|ontology_enrichment_disease=DOID:4468!5.92e-15!2;DOID:299!1.24e-12!25;DOID:305!4.77e-10!106;DOID:2152!3.83e-08!1;DOID:0050687!8.95e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!4.28e-16!55;UBERON:0005173!4.28e-16!55;UBERON:0008835!1.10e-14!22;UBERON:0003894!1.10e-14!22;UBERON:0002417!2.71e-14!61;UBERON:0000916!2.71e-14!61;UBERON:0009854!5.17e-14!23;UBERON:0005177!1.43e-13!107;UBERON:0007499!7.94e-13!25;UBERON:0009497!7.94e-13!25;UBERON:0000015!7.94e-13!25;UBERON:0002423!7.94e-13!25;UBERON:0006235!7.94e-13!25;UBERON:0004161!7.94e-13!25;UBERON:0002107!9.18e-13!19;UBERON:0006925!9.18e-13!19;UBERON:0008836!9.18e-13!19;UBERON:0009856!2.66e-12!26;UBERON:0006947!4.12e-10!3;UBERON:0004054!4.12e-10!3;UBERON:0000466!1.89e-09!126;UBERON:0009569!2.16e-09!113;UBERON:0005057!3.47e-09!26;UBERON:0004921!4.27e-09!129;UBERON:0004185!4.27e-09!129;UBERON:0003929!5.73e-09!54;UBERON:0002113!6.79e-09!27;UBERON:0003918!6.79e-09!27;UBERON:0005095!6.79e-09!27;UBERON:0007687!6.79e-09!27;UBERON:0000949!7.35e-09!45;UBERON:0001000!2.50e-08!1;UBERON:0005352!2.50e-08!1;UBERON:0004911!3.83e-08!1;UBERON:0001301!4.41e-08!1;UBERON:0001041!5.19e-08!98;UBERON:0005904!8.53e-08!4;UBERON:0001242!9.46e-08!4;UBERON:0001262!9.46e-08!4;UBERON:0004786!9.46e-08!4;UBERON:0004808!9.46e-08!4;UBERON:0001277!9.46e-08!4;UBERON:0002365!1.29e-07!31;UBERON:0002330!1.29e-07!31;UBERON:0000489!2.03e-07!32;UBERON:0001007!4.17e-07!155;UBERON:0001555!4.17e-07!155;UBERON:0007026!4.17e-07!155;UBERON:0003104!7.50e-07!238;UBERON:0009142!7.50e-07!238;UBERON:0005911!8.92e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;3.97e-12;24!UBERON:0011143;3.97e-12;24!UBERON:0000489;3.10e-10;29!UBERON:0006554;6.23e-10;30!UBERON:0001008;6.23e-10;30!UBERON:0001264;6.13e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.91e-11,26;UBERON:0003918,2.91e-11,26;UBERON:0011143,2.91e-11,26;UBERON:0005095,2.91e-11,26;UBERON:0007687,2.91e-11,26;UBERON:0000489,1.25e-09,31;UBERON:0001264,5.73e-08,10;UBERON:0005177,6.45e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0.404421263125109,0,0,0,0,0,0,0,0,0,0,0,1.10327990218877,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29556554731173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.540219106755613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p7@SGK2 | |||
}} |
Revision as of 08:32, 12 September 2013
Short description: | p7@SGK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SGK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_NM_170693_5end |
EntrezGene: | SGK2 |
HGNC: | 13900 |
UniProt: | Q9HBY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 2.91e-11 | 26 |
kidney mesenchyme | 2.91e-11 | 26 |
upper urinary tract | 2.91e-11 | 26 |
kidney rudiment | 2.91e-11 | 26 |
kidney field | 2.91e-11 | 26 |
cavitated compound organ | 1.25e-09 | 31 |
pancreas | 5.73e-08 | 10 |
trunk region element | 6.45e-07 | 101 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.