FFCP PHASE1:Hg19::chr20:52225051..52225064,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C925|description=CAGE_peak_at_chr20:52225051..52225064,-|id=chr20:52225051..52225064,-|ontology_enrichment_celltype=CL:0000039!8.47e-24!7;CL:0000586!8.47e-24!7;CL:0002322!6.88e-15!5;CL:0002541!1.26e-10!3|ontology_enrichment_celltype_v019=CL:0000039;3.18e-51;7!CL:0000586;3.18e-51;7!CL:0002541;1.03e-10;3|ontology_enrichment_celltype_v019_2=CL:0000039,3.31e-51,7;CL:0000586,3.31e-51,7;CL:0002541,9.56e-11,3|ontology_enrichment_development_v019=UBERON:0009117;4.31e-12;10!UBERON:0005564;4.31e-12;10!UBERON:0003124;7.01e-09;1|ontology_enrichment_disease=DOID:3095!3.63e-13!22;DOID:2994!3.63e-13!22;DOID:1036!4.65e-10!8;DOID:8692!2.16e-08!31|ontology_enrichment_disease_v019=DOID:1036;1.86e-21;8!DOID:3095;1.87e-20;22!DOID:2994;1.87e-20;22!DOID:8692;2.19e-13;31!DOID:1240;3.72e-09;39!DOID:1799;5.59e-09;1!DOID:10165;5.59e-09;1!DOID:1798;5.59e-09;1!DOID:8552;2.95e-08;1|ontology_enrichment_disease_v019_2=DOID:1036,1.60e-21,8;DOID:3095,1.90e-20,22;DOID:2994,1.90e-20,22;DOID:8692,2.97e-13,31;DOID:1240,2.57e-10,39;DOID:162,1.78e-09,235;DOID:14566,3.39e-09,239;DOID:1799,5.59e-09,1;DOID:10165,5.59e-09,1;DOID:1798,5.59e-09,1;DOID:8552,2.64e-08,1;DOID:2531,1.22e-07,51;DOID:0060083,1.22e-07,51;DOID:0050686,2.12e-07,137|ontology_enrichment_uberon=UBERON:0000473!3.13e-14!8;UBERON:0000476!1.26e-10!3;UBERON:0000920!1.26e-10!3;UBERON:0003135!3.83e-10!11;UBERON:0005631!6.80e-08!14;UBERON:0000158!6.80e-08!14;UBERON:0003124!7.12e-08!7|ontology_enrichment_uberon_v019=UBERON:0000473;4.48e-15;8!UBERON:0003135;5.26e-11;11!UBERON:0003124;1.03e-10;3!UBERON:0000920;1.03e-10;3!UBERON:0005631;5.38e-07;10!UBERON:0000158;5.38e-07;10!UBERON:0000945;9.98e-07;5!UBERON:0010039;9.98e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.40e-15,8;UBERON:0003135,5.20e-11,11;UBERON:0000920,9.56e-11,3;UBERON:0003124,4.47e-10,7;UBERON:0005631,1.74e-08,14;UBERON:0000158,1.74e-08,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.795178609928912,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,2.2594512186427,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,2.46174797895425,0.270455678475983,0,1.4098700508785,0,0,0.728163130497081,0,0,1.43246690842614,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03402920234213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37804494041792,10.0528561738945,8.80043712568265,3.82801391678303,0.457987967009312,6.39641731222362,0,0,1.82832850090172,1.80476528493745,1.56850027454192,1.84603745673427,1.3282761290693,1.90723894776454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.79638258206047,0,4.12331746197296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,12.5715213351083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.1363441267518,0,0,0,0,0,0,0,0,0.840816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9027214524411,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,3.80095503034311,5.09944148709909,10.955913615888,7.99485625953151,6.016980943017,0.0757786982182394,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr20:52225051..52225064,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C925 | |||
|description=CAGE_peak_at_chr20:52225051..52225064,- | |||
|id=chr20:52225051..52225064,- | |||
|ontology_enrichment_celltype=CL:0000039!8.47e-24!7;CL:0000586!8.47e-24!7;CL:0002322!6.88e-15!5;CL:0002541!1.26e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.18e-51;7!CL:0000586;3.18e-51;7!CL:0002541;1.03e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.31e-51,7;CL:0000586,3.31e-51,7;CL:0002541,9.56e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.31e-12;10!UBERON:0005564;4.31e-12;10!UBERON:0003124;7.01e-09;1 | |||
|ontology_enrichment_disease=DOID:3095!3.63e-13!22;DOID:2994!3.63e-13!22;DOID:1036!4.65e-10!8;DOID:8692!2.16e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.86e-21;8!DOID:3095;1.87e-20;22!DOID:2994;1.87e-20;22!DOID:8692;2.19e-13;31!DOID:1240;3.72e-09;39!DOID:1799;5.59e-09;1!DOID:10165;5.59e-09;1!DOID:1798;5.59e-09;1!DOID:8552;2.95e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.60e-21,8;DOID:3095,1.90e-20,22;DOID:2994,1.90e-20,22;DOID:8692,2.97e-13,31;DOID:1240,2.57e-10,39;DOID:162,1.78e-09,235;DOID:14566,3.39e-09,239;DOID:1799,5.59e-09,1;DOID:10165,5.59e-09,1;DOID:1798,5.59e-09,1;DOID:8552,2.64e-08,1;DOID:2531,1.22e-07,51;DOID:0060083,1.22e-07,51;DOID:0050686,2.12e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.13e-14!8;UBERON:0000476!1.26e-10!3;UBERON:0000920!1.26e-10!3;UBERON:0003135!3.83e-10!11;UBERON:0005631!6.80e-08!14;UBERON:0000158!6.80e-08!14;UBERON:0003124!7.12e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.48e-15;8!UBERON:0003135;5.26e-11;11!UBERON:0003124;1.03e-10;3!UBERON:0000920;1.03e-10;3!UBERON:0005631;5.38e-07;10!UBERON:0000158;5.38e-07;10!UBERON:0000945;9.98e-07;5!UBERON:0010039;9.98e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.40e-15,8;UBERON:0003135,5.20e-11,11;UBERON:0000920,9.56e-11,3;UBERON:0003124,4.47e-10,7;UBERON:0005631,1.74e-08,14;UBERON:0000158,1.74e-08,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.795178609928912,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,2.2594512186427,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0.79312517629427,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,2.46174797895425,0.270455678475983,0,1.4098700508785,0,0,0.728163130497081,0,0,1.43246690842614,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03402920234213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37804494041792,10.0528561738945,8.80043712568265,3.82801391678303,0.457987967009312,6.39641731222362,0,0,1.82832850090172,1.80476528493745,1.56850027454192,1.84603745673427,1.3282761290693,1.90723894776454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.79638258206047,0,4.12331746197296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,12.5715213351083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.1363441267518,0,0,0,0,0,0,0,0,0.840816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9027214524411,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,3.80095503034311,5.09944148709909,10.955913615888,7.99485625953151,6.016980943017,0.0757786982182394,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:52225051..52225064,- | |||
}} |
Revision as of 09:12, 12 September 2013
Short description: | p@chr20:52225051..52225064, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:52225051..52225064, - |
Coexpression cluster: | C925_testicular_pancreatic_choriocarcinoma_placenta_H9_chorionic_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.31e-51 | 7 |
germ cell | 3.31e-51 | 7 |
chorionic membrane mesenchymal stem cell | 9.56e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 4.40e-15 | 8 |
male reproductive organ | 5.20e-11 | 11 |
egg chorion | 9.56e-11 | 3 |
chorion | 4.47e-10 | 7 |
extraembryonic membrane | 1.74e-08 | 14 |
membranous layer | 1.74e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.60e-21 | 8 |
germ cell and embryonal cancer | 1.90e-20 | 22 |
germ cell cancer | 1.90e-20 | 22 |
myeloid leukemia | 2.97e-13 | 31 |
leukemia | 2.57e-10 | 39 |
cancer | 1.78e-09 | 235 |
disease of cellular proliferation | 3.39e-09 | 239 |
islet cell tumor | 5.59e-09 | 1 |
endocrine pancreas cancer | 5.59e-09 | 1 |
pancreatic endocrine carcinoma | 5.59e-09 | 1 |
chronic myeloid leukemia | 2.64e-08 | 1 |
hematologic cancer | 1.22e-07 | 51 |
immune system cancer | 1.22e-07 | 51 |
organ system cancer | 2.12e-07 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.