FFCP PHASE1:Hg19::chr2:122247879..122247913,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23332|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17088|TSSclassifier=S|UniProt=F5H2E2|association_with_transcript=0bp_to_ENST00000430234,ENST00000545861,uc010yyw.1_5end|coexpression_cluster_id=C10|description=CAGE_peak_5_at_CLASP1_5end|id=chr2:122247879..122247913,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002605;2.88e-08;3!CL:0002319;4.41e-07;25|ontology_enrichment_celltype_v019_2=CL:0002605,2.92e-08,3;CL:0000047,1.60e-07,8;CL:0002319,4.03e-07,25|ontology_enrichment_development_v019=UBERON:0006601;1.20e-11;82!UBERON:0006215;6.10e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.80e-35!82;UBERON:0005743!5.55e-34!86;UBERON:0001049!1.07e-33!57;UBERON:0005068!1.07e-33!57;UBERON:0006241!1.07e-33!57;UBERON:0007135!1.07e-33!57;UBERON:0000073!4.53e-31!94;UBERON:0001016!4.53e-31!94;UBERON:0000955!6.36e-30!69;UBERON:0006238!6.36e-30!69;UBERON:0000033!4.66e-29!123;UBERON:0002616!5.37e-29!59;UBERON:0002780!1.60e-28!41;UBERON:0001890!1.60e-28!41;UBERON:0006240!1.60e-28!41;UBERON:0000153!2.29e-28!129;UBERON:0007811!2.29e-28!129;UBERON:0002346!1.26e-27!90;UBERON:0003080!1.70e-27!42;UBERON:0000924!2.19e-27!173;UBERON:0006601!2.19e-27!173;UBERON:0001893!1.02e-26!34;UBERON:0003075!3.55e-26!86;UBERON:0007284!3.55e-26!86;UBERON:0002020!5.02e-26!34;UBERON:0003528!5.02e-26!34;UBERON:0004121!5.65e-26!169;UBERON:0002791!1.08e-25!33;UBERON:0000956!1.21e-25!25;UBERON:0000203!1.21e-25!25;UBERON:0001869!4.32e-25!32;UBERON:0002619!1.17e-22!22;UBERON:0003056!4.52e-22!61;UBERON:0007023!5.50e-21!115;UBERON:0001950!1.16e-20!20;UBERON:0000475!5.89e-13!365;UBERON:0000481!1.96e-09!347;UBERON:0000064!1.07e-08!219;UBERON:0000200!7.15e-08!6;UBERON:0000468!1.04e-07!659;UBERON:0001871!1.09e-07!7;UBERON:0003076!1.73e-07!15;UBERON:0003057!1.73e-07!15;UBERON:0004733!3.92e-07!12;UBERON:0002028!3.92e-07!12;UBERON:0007277!3.92e-07!12;UBERON:0000480!4.50e-07!626;UBERON:0000467!7.47e-07!625;UBERON:0000922!8.34e-07!612;UBERON:0000923!9.20e-07!604;UBERON:0005291!9.20e-07!604;UBERON:0006598!9.20e-07!604;UBERON:0002532!9.20e-07!604;UBERON:0000349!9.58e-07!5|ontology_enrichment_uberon_v019=UBERON:0000956;1.87e-56;25!UBERON:0000203;1.87e-56;25!UBERON:0002619;1.07e-49;22!UBERON:0001893;7.08e-47;34!UBERON:0001869;8.09e-46;32!UBERON:0001950;3.61e-45;20!UBERON:0002791;1.13e-44;32!UBERON:0003528;6.43e-41;34!UBERON:0002020;6.43e-41;34!UBERON:0002780;1.43e-38;41!UBERON:0001890;1.43e-38;41!UBERON:0000073;8.49e-36;53!UBERON:0002616;8.49e-36;53!UBERON:0000955;1.13e-22;68!UBERON:0001017;5.03e-22;75!UBERON:0001016;1.88e-20;83!UBERON:0000200;1.11e-15;6!UBERON:0001871;1.24e-13;6!UBERON:0000349;3.34e-13;5!UBERON:0001872;7.62e-13;5!UBERON:0002021;1.50e-12;5!UBERON:0011216;9.58e-10;132!UBERON:0001870;9.52e-09;3!UBERON:0004733;7.95e-07;12!UBERON:0002028;7.95e-07;12!UBERON:0007023;8.03e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.63e-57,81;UBERON:0000073,1.78e-57,53;UBERON:0002616,1.78e-57,53;UBERON:0000956,1.84e-56,25;UBERON:0000203,1.84e-56,25;UBERON:0001893,3.28e-54,34;UBERON:0001049,7.69e-54,56;UBERON:0005068,7.69e-54,56;UBERON:0006241,7.69e-54,56;UBERON:0007135,7.69e-54,56;UBERON:0002780,2.16e-53,41;UBERON:0001890,2.16e-53,41;UBERON:0003080,2.16e-53,41;UBERON:0006240,2.16e-53,41;UBERON:0001016,6.51e-53,89;UBERON:0000955,1.86e-52,68;UBERON:0006238,1.86e-52,68;UBERON:0001869,1.47e-50,32;UBERON:0002791,5.50e-50,32;UBERON:0002619,1.04e-49,22;UBERON:0003528,1.21e-46,34;UBERON:0002020,1.21e-46,34;UBERON:0001950,3.36e-45,20;UBERON:0004121,1.04e-37,171;UBERON:0000924,1.04e-37,171;UBERON:0006601,1.04e-37,171;UBERON:0003075,2.51e-35,82;UBERON:0007284,2.51e-35,82;UBERON:0003056,3.37e-35,61;UBERON:0002346,4.60e-35,86;UBERON:0010371,1.77e-30,104;UBERON:0011216,1.17e-28,223;UBERON:0010314,1.07e-21,132;UBERON:0007023,7.09e-17,114;UBERON:0000200,1.10e-15,6;UBERON:0001871,1.18e-13,6;UBERON:0000349,3.56e-13,5;UBERON:0001872,8.63e-13,5;UBERON:0002021,1.37e-12,5;UBERON:0000025,1.65e-10,192;UBERON:0004111,2.00e-09,240;UBERON:0000923,7.99e-09,560;UBERON:0010316,7.99e-09,560;UBERON:0005291,7.99e-09,560;UBERON:0006598,7.99e-09,560;UBERON:0010317,7.99e-09,560;UBERON:0002532,7.99e-09,560;UBERON:0001870,9.06e-09,3;UBERON:0002050,1.24e-08,564;UBERON:0000922,6.51e-08,592;UBERON:0005423,7.63e-08,581;UBERON:0004733,8.45e-07,12;UBERON:0002028,8.45e-07,12;UBERON:0007277,8.45e-07,12|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0.527533956456907,0.866364470720326,0.331397375727916,0,0,0,0,0.123121058076788,0,0,4.29353980696585,5.47497700291537,6.52821725892975,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0.369754010166788,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0.50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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17088 | |||
|TSSclassifier=S | |||
|UniProt=F5H2E2 | |||
|association_with_transcript=0bp_to_ENST00000430234,ENST00000545861,uc010yyw.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_5_at_CLASP1_5end | |||
|id=chr2:122247879..122247913,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.88e-08;3!CL:0002319;4.41e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.92e-08,3;CL:0000047,1.60e-07,8;CL:0002319,4.03e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.20e-11;82!UBERON:0006215;6.10e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.80e-35!82;UBERON:0005743!5.55e-34!86;UBERON:0001049!1.07e-33!57;UBERON:0005068!1.07e-33!57;UBERON:0006241!1.07e-33!57;UBERON:0007135!1.07e-33!57;UBERON:0000073!4.53e-31!94;UBERON:0001016!4.53e-31!94;UBERON:0000955!6.36e-30!69;UBERON:0006238!6.36e-30!69;UBERON:0000033!4.66e-29!123;UBERON:0002616!5.37e-29!59;UBERON:0002780!1.60e-28!41;UBERON:0001890!1.60e-28!41;UBERON:0006240!1.60e-28!41;UBERON:0000153!2.29e-28!129;UBERON:0007811!2.29e-28!129;UBERON:0002346!1.26e-27!90;UBERON:0003080!1.70e-27!42;UBERON:0000924!2.19e-27!173;UBERON:0006601!2.19e-27!173;UBERON:0001893!1.02e-26!34;UBERON:0003075!3.55e-26!86;UBERON:0007284!3.55e-26!86;UBERON:0002020!5.02e-26!34;UBERON:0003528!5.02e-26!34;UBERON:0004121!5.65e-26!169;UBERON:0002791!1.08e-25!33;UBERON:0000956!1.21e-25!25;UBERON:0000203!1.21e-25!25;UBERON:0001869!4.32e-25!32;UBERON:0002619!1.17e-22!22;UBERON:0003056!4.52e-22!61;UBERON:0007023!5.50e-21!115;UBERON:0001950!1.16e-20!20;UBERON:0000475!5.89e-13!365;UBERON:0000481!1.96e-09!347;UBERON:0000064!1.07e-08!219;UBERON:0000200!7.15e-08!6;UBERON:0000468!1.04e-07!659;UBERON:0001871!1.09e-07!7;UBERON:0003076!1.73e-07!15;UBERON:0003057!1.73e-07!15;UBERON:0004733!3.92e-07!12;UBERON:0002028!3.92e-07!12;UBERON:0007277!3.92e-07!12;UBERON:0000480!4.50e-07!626;UBERON:0000467!7.47e-07!625;UBERON:0000922!8.34e-07!612;UBERON:0000923!9.20e-07!604;UBERON:0005291!9.20e-07!604;UBERON:0006598!9.20e-07!604;UBERON:0002532!9.20e-07!604;UBERON:0000349!9.58e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.87e-56;25!UBERON:0000203;1.87e-56;25!UBERON:0002619;1.07e-49;22!UBERON:0001893;7.08e-47;34!UBERON:0001869;8.09e-46;32!UBERON:0001950;3.61e-45;20!UBERON:0002791;1.13e-44;32!UBERON:0003528;6.43e-41;34!UBERON:0002020;6.43e-41;34!UBERON:0002780;1.43e-38;41!UBERON:0001890;1.43e-38;41!UBERON:0000073;8.49e-36;53!UBERON:0002616;8.49e-36;53!UBERON:0000955;1.13e-22;68!UBERON:0001017;5.03e-22;75!UBERON:0001016;1.88e-20;83!UBERON:0000200;1.11e-15;6!UBERON:0001871;1.24e-13;6!UBERON:0000349;3.34e-13;5!UBERON:0001872;7.62e-13;5!UBERON:0002021;1.50e-12;5!UBERON:0011216;9.58e-10;132!UBERON:0001870;9.52e-09;3!UBERON:0004733;7.95e-07;12!UBERON:0002028;7.95e-07;12!UBERON:0007023;8.03e-07;114 | |||
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| |||
|short_description=p5@CLASP1 | |||
}} |
Revision as of 13:19, 12 September 2013
Short description: | p5@CLASP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_CLASP1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000430234, ENST00000545861, uc010yyw.1_5end |
EntrezGene: | CLASP1 |
HGNC: | 17088 |
UniProt: | F5H2E2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.92e-08 | 3 |
neuronal stem cell | 1.60e-07 | 8 |
neural cell | 4.03e-07 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.