FFCP PHASE1:Hg19::chr2:201754233..201754242,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=60491|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13390|TSSclassifier=S|UniProt=B8ZZI0|association_with_transcript=63bp_to_ENST00000409129_5end|coexpression_cluster_id=C93|description=CAGE_peak_4_at_NIF3L1_5end|id=chr2:201754233..201754242,+|ontology_enrichment_celltype=CL:0000988!8.58e-07!182|ontology_enrichment_celltype_v019=CL:0000511;1.55e-09;1!CL:0002625;1.55e-09;1!CL:0000216;1.55e-09;1|ontology_enrichment_celltype_v019_2=CL:0000511,1.15e-09,1;CL:0002625,1.15e-09,1;CL:0000216,1.15e-09,1;CL:0000988,5.11e-08,177;CL:0000763,1.48e-07,108;CL:0000049,1.48e-07,108|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!5.34e-11!235;DOID:14566!1.16e-10!239;DOID:2531!5.75e-10!51;DOID:0060083!5.75e-10!51;DOID:1240!1.71e-09!39;DOID:8692!1.75e-08!31;DOID:1036!8.33e-08!8;DOID:305!3.62e-07!106|ontology_enrichment_disease_v019=DOID:1036;1.35e-26;8!DOID:8692;3.39e-25;31!DOID:1240;9.50e-22;39!DOID:2531;5.44e-14;51!DOID:0060083;5.44e-14;51!DOID:1799;1.55e-09;1!DOID:10165;1.55e-09;1!DOID:1798;1.55e-09;1|ontology_enrichment_disease_v019_2=DOID:1036,1.85e-26,8;DOID:8692,9.62e-26,31;DOID:1240,1.98e-24,39;DOID:2531,2.92e-18,51;DOID:0060083,2.92e-18,51;DOID:1799,2.08e-09,1;DOID:10165,2.08e-09,1;DOID:1798,2.08e-09,1;DOID:0050686,4.75e-08,137|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001136;1.55e-09;1!UBERON:0001343;1.55e-09;1!UBERON:0004910;1.55e-09;1!UBERON:0004813;1.55e-09;1!UBERON:0002331;3.14e-08;10|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.15e-09,1;UBERON:0001343,1.15e-09,1;UBERON:0004910,1.15e-09,1;UBERON:0005154,1.15e-09,1;UBERON:0005295,1.15e-09,1;UBERON:0004813,1.15e-09,1;UBERON:0005297,1.15e-09,1;UBERON:0005294,1.15e-09,1;UBERON:0010141,1.15e-09,1;UBERON:0005891,1.15e-09,1;UBERON:0002331,3.14e-08,10;UBERON:0000358,3.14e-08,10;UBERON:0000307,3.14e-08,10;UBERON:0000091,3.14e-08,10;UBERON:0000087,3.14e-08,10;UBERON:0007010,3.14e-08,10;UBERON:0007806,3.14e-08,10;UBERON:0008780,3.14e-08,10;UBERON:0005728,3.14e-08,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0.334372990781356,0.651844533267181,0.473447805734733,0,0.222820913770347,0.294605907474837,0.664601683750863,0.270803863765016,0.128091319725675,0.390178042679635,0.328875809207352,0.829050053357545,0.289803085735052,0,0.267540828089713,0,0,0,0,0,0,0,0.950452044448374,0.301150238155546,0.127986611154418,0,0.473554504088034,0.821127996921047,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.327447688744282,0,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0.10075209822764,0,0,0,0,0.243947412259191,0,0.232387885739037,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0.220587945464788,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0.179117045405697,0,0,0.985326475791887,0.792435906119034,0.414656231081544,0.144119953416961,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.591092280605782,0.215627574859517,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.483437798366489,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.647747748306418,1.54227252690289,0,0,0,0,0,1.53481913652154,0.522870902049801,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,1.56989728039846,0.179872457583315,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.144269212976445,0.0711418433484141,0,2.3949524571938,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0.343505344755765,0,0,0.166849141711909,0,6.12493582569533,3.69262196843137,1.6227340708559,0.33307196799782,1.4098700508785,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0.19924798825107,0,0,0,0.123084805461069,0,0.0898683511473268,0.716084698702437,0.511572370226872,0,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0.1137934482855,0,0.23638768176793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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=60491 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13390 | |||
|TSSclassifier=S | |||
|UniProt=B8ZZI0 | |||
|association_with_transcript=63bp_to_ENST00000409129_5end | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_4_at_NIF3L1_5end | |||
|id=chr2:201754233..201754242,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.58e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.55e-09;1!CL:0002625;1.55e-09;1!CL:0000216;1.55e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.15e-09,1;CL:0002625,1.15e-09,1;CL:0000216,1.15e-09,1;CL:0000988,5.11e-08,177;CL:0000763,1.48e-07,108;CL:0000049,1.48e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.34e-11!235;DOID:14566!1.16e-10!239;DOID:2531!5.75e-10!51;DOID:0060083!5.75e-10!51;DOID:1240!1.71e-09!39;DOID:8692!1.75e-08!31;DOID:1036!8.33e-08!8;DOID:305!3.62e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.35e-26;8!DOID:8692;3.39e-25;31!DOID:1240;9.50e-22;39!DOID:2531;5.44e-14;51!DOID:0060083;5.44e-14;51!DOID:1799;1.55e-09;1!DOID:10165;1.55e-09;1!DOID:1798;1.55e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.85e-26,8;DOID:8692,9.62e-26,31;DOID:1240,1.98e-24,39;DOID:2531,2.92e-18,51;DOID:0060083,2.92e-18,51;DOID:1799,2.08e-09,1;DOID:10165,2.08e-09,1;DOID:1798,2.08e-09,1;DOID:0050686,4.75e-08,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.55e-09;1!UBERON:0001343;1.55e-09;1!UBERON:0004910;1.55e-09;1!UBERON:0004813;1.55e-09;1!UBERON:0002331;3.14e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.15e-09,1;UBERON:0001343,1.15e-09,1;UBERON:0004910,1.15e-09,1;UBERON:0005154,1.15e-09,1;UBERON:0005295,1.15e-09,1;UBERON:0004813,1.15e-09,1;UBERON:0005297,1.15e-09,1;UBERON:0005294,1.15e-09,1;UBERON:0010141,1.15e-09,1;UBERON:0005891,1.15e-09,1;UBERON:0002331,3.14e-08,10;UBERON:0000358,3.14e-08,10;UBERON:0000307,3.14e-08,10;UBERON:0000091,3.14e-08,10;UBERON:0000087,3.14e-08,10;UBERON:0007010,3.14e-08,10;UBERON:0007806,3.14e-08,10;UBERON:0008780,3.14e-08,10;UBERON:0005728,3.14e-08,10 | |||
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| |||
|short_description=p4@NIF3L1 | |||
}} |
Revision as of 15:59, 12 September 2013
Short description: | p4@NIF3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_NIF3L1_5end |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | 63bp_to_ENST00000409129_5end |
EntrezGene: | NIF3L1 |
HGNC: | 13390 |
UniProt: | B8ZZI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.15e-09 | 1 |
seminiferous tubule epithelial cell | 1.15e-09 | 1 |
Sertoli cell | 1.15e-09 | 1 |
hematopoietic cell | 5.11e-08 | 177 |
myeloid cell | 1.48e-07 | 108 |
common myeloid progenitor | 1.48e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.15e-09 | 1 |
seminiferous tubule of testis | 1.15e-09 | 1 |
epithelium of male gonad | 1.15e-09 | 1 |
epithelial cord | 1.15e-09 | 1 |
sex cord | 1.15e-09 | 1 |
seminiferous tubule epithelium | 1.15e-09 | 1 |
testis sex cord | 1.15e-09 | 1 |
genital ridge | 1.15e-09 | 1 |
primitive sex cord of indifferent gonad | 1.15e-09 | 1 |
coelomic epithelium | 1.15e-09 | 1 |
umbilical cord | 3.14e-08 | 10 |
blastocyst | 3.14e-08 | 10 |
blastula | 3.14e-08 | 10 |
bilaminar disc | 3.14e-08 | 10 |
inner cell mass | 3.14e-08 | 10 |
cleaving embryo | 3.14e-08 | 10 |
connecting stalk | 3.14e-08 | 10 |
inner cell mass derived epiblast | 3.14e-08 | 10 |
extraembryonic mesoderm | 3.14e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.85e-26 | 8 |
myeloid leukemia | 9.62e-26 | 31 |
leukemia | 1.98e-24 | 39 |
hematologic cancer | 2.92e-18 | 51 |
immune system cancer | 2.92e-18 | 51 |
islet cell tumor | 2.08e-09 | 1 |
endocrine pancreas cancer | 2.08e-09 | 1 |
pancreatic endocrine carcinoma | 2.08e-09 | 1 |
organ system cancer | 4.75e-08 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.