FFCP PHASE1:Hg19::chr2:202298241..202298252,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=66008|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13206|TSSclassifier=S|UniProt=Q53RS6|association_with_transcript=24bp_to_ENST00000440597_5end|coexpression_cluster_id=C33|description=CAGE_peak_10_at_TRAK2_5end|id=chr2:202298241..202298252,-|ontology_enrichment_celltype=CL:0000764!4.27e-14!2;CL:0000765!4.27e-14!2;CL:0000050!4.27e-14!2;CL:0000038!4.27e-14!2;CL:0000558!4.27e-14!2;CL:0000547!4.27e-14!2;CL:0000549!4.27e-14!2;CL:0000550!4.27e-14!2;CL:0000552!4.27e-14!2|ontology_enrichment_celltype_v019=CL:0000764;1.30e-37;2!CL:0000558;1.30e-37;2|ontology_enrichment_celltype_v019_2=CL:0000764,1.30e-37,2;CL:0000765,1.30e-37,2;CL:0000050,1.30e-37,2;CL:0000038,1.30e-37,2;CL:0000558,1.30e-37,2;CL:0000547,1.30e-37,2;CL:0000549,1.30e-37,2;CL:0000550,1.30e-37,2;CL:0000552,1.30e-37,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8552!1.95e-07!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!6.11e-33!15;UBERON:0000179!6.11e-33!15;UBERON:0000463!6.11e-33!15;UBERON:0007023!2.24e-15!115;UBERON:0002240!4.50e-09!3;UBERON:0001874!2.83e-07!1;UBERON:0006834!3.40e-07!1|ontology_enrichment_uberon_v019=UBERON:0000178;1.70e-95;15!UBERON:0000179;1.70e-95;15!UBERON:0000463;1.70e-95;15!UBERON:0002390;8.18e-41;32!UBERON:0002193;1.22e-22;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.70e-95,15;UBERON:0000179,1.70e-95,15;UBERON:0000463,1.70e-95,15;UBERON:0007023,1.73e-18,114;UBERON:0002390,3.90e-14,98;UBERON:0003061,3.90e-14,98;UBERON:0004535,8.72e-13,109;UBERON:0002193,8.72e-13,108;UBERON:0001009,1.99e-12,112|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4978129688183,10.1959825899711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,4.05958087385735,6.88173486428138,3.98753031021914,4.52640373369799,4.11362273086194,5.83625980073446,9.18053443304795,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.426467963801962,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p10@TRAK2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=66008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13206 | |||
|TSSclassifier=S | |||
|UniProt=Q53RS6 | |||
|association_with_transcript=24bp_to_ENST00000440597_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_10_at_TRAK2_5end | |||
|id=chr2:202298241..202298252,- | |||
|ontology_enrichment_celltype=CL:0000764!4.27e-14!2;CL:0000765!4.27e-14!2;CL:0000050!4.27e-14!2;CL:0000038!4.27e-14!2;CL:0000558!4.27e-14!2;CL:0000547!4.27e-14!2;CL:0000549!4.27e-14!2;CL:0000550!4.27e-14!2;CL:0000552!4.27e-14!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.30e-37;2!CL:0000558;1.30e-37;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.30e-37,2;CL:0000765,1.30e-37,2;CL:0000050,1.30e-37,2;CL:0000038,1.30e-37,2;CL:0000558,1.30e-37,2;CL:0000547,1.30e-37,2;CL:0000549,1.30e-37,2;CL:0000550,1.30e-37,2;CL:0000552,1.30e-37,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8552!1.95e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.11e-33!15;UBERON:0000179!6.11e-33!15;UBERON:0000463!6.11e-33!15;UBERON:0007023!2.24e-15!115;UBERON:0002240!4.50e-09!3;UBERON:0001874!2.83e-07!1;UBERON:0006834!3.40e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.70e-95;15!UBERON:0000179;1.70e-95;15!UBERON:0000463;1.70e-95;15!UBERON:0002390;8.18e-41;32!UBERON:0002193;1.22e-22;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.70e-95,15;UBERON:0000179,1.70e-95,15;UBERON:0000463,1.70e-95,15;UBERON:0007023,1.73e-18,114;UBERON:0002390,3.90e-14,98;UBERON:0003061,3.90e-14,98;UBERON:0004535,8.72e-13,109;UBERON:0002193,8.72e-13,108;UBERON:0001009,1.99e-12,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.4978129688183,10.1959825899711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,4.05958087385735,6.88173486428138,3.98753031021914,4.52640373369799,4.11362273086194,5.83625980073446,9.18053443304795,3.96562588147135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.426467963801962,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p10@TRAK2 | |||
}} |
Revision as of 16:02, 12 September 2013
Short description: | p10@TRAK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_TRAK2_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 24bp_to_ENST00000440597_5end |
EntrezGene: | TRAK2 |
HGNC: | 13206 |
UniProt: | Q53RS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.30e-37 | 2 |
erythroblast | 1.30e-37 | 2 |
megakaryocyte-erythroid progenitor cell | 1.30e-37 | 2 |
erythroid progenitor cell | 1.30e-37 | 2 |
reticulocyte | 1.30e-37 | 2 |
proerythroblast | 1.30e-37 | 2 |
basophilic erythroblast | 1.30e-37 | 2 |
polychromatophilic erythroblast | 1.30e-37 | 2 |
orthochromatic erythroblast | 1.30e-37 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.70e-95 | 15 |
haemolymphatic fluid | 1.70e-95 | 15 |
organism substance | 1.70e-95 | 15 |
adult organism | 1.73e-18 | 114 |
hematopoietic system | 3.90e-14 | 98 |
blood island | 3.90e-14 | 98 |
cardiovascular system | 8.72e-13 | 109 |
hemolymphoid system | 8.72e-13 | 108 |
circulatory system | 1.99e-12 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.