FFCP PHASE1:Hg19::chr2:211542663..211542679,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C768|description=CAGE_peak_at_chr2:211542663..211542679,+|id=chr2:211542663..211542679,+|ontology_enrichment_celltype=CL:0002150!1.66e-10!3;CL:0000861!1.66e-10!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008947;2.12e-28;29|ontology_enrichment_disease=DOID:305!7.61e-08!106;DOID:0050687!3.10e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,1.70e-10,106;DOID:0050687,2.33e-07,143|ontology_enrichment_uberon=UBERON:0001737!4.28e-29!9;UBERON:0001557!9.57e-13!19;UBERON:0004921!1.28e-11!129;UBERON:0004185!1.28e-11!129;UBERON:0001007!3.75e-11!155;UBERON:0001555!3.75e-11!155;UBERON:0007026!3.75e-11!155;UBERON:0008947!8.27e-10!38;UBERON:0003258!8.27e-10!38;UBERON:0004119!1.31e-09!169;UBERON:0000925!1.31e-09!169;UBERON:0006595!1.31e-09!169;UBERON:0001041!5.83e-09!98;UBERON:0000072!1.25e-07!46;UBERON:0002107!3.72e-07!19;UBERON:0006925!3.72e-07!19;UBERON:0008836!3.72e-07!19;UBERON:0000077!4.81e-07!130;UBERON:0009497!9.92e-07!25;UBERON:0000015!9.92e-07!25;UBERON:0002423!9.92e-07!25;UBERON:0006235!9.92e-07!25;UBERON:0004161!9.92e-07!25|ontology_enrichment_uberon_v019=UBERON:0001737;2.42e-74;9!UBERON:0001557;2.42e-74;9!UBERON:0000072;1.75e-20;37!UBERON:0000065;1.67e-16;44!UBERON:0002107;4.09e-09;19!UBERON:0006925;4.09e-09;19!UBERON:0001004;1.54e-07;65!UBERON:0002423;5.77e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.66e-74,9;UBERON:0001557,6.39e-35,19;UBERON:0008947,1.66e-21,38;UBERON:0003258,1.66e-21,38;UBERON:0001041,1.24e-18,87;UBERON:0000072,3.56e-17,47;UBERON:0004921,2.61e-15,118;UBERON:0000065,8.42e-15,54;UBERON:0001007,4.32e-12,145;UBERON:0001555,4.32e-12,145;UBERON:0007026,4.32e-12,145;UBERON:0004119,9.12e-11,160;UBERON:0000925,9.12e-11,160;UBERON:0006595,9.12e-11,160;UBERON:0001004,1.74e-10,74;UBERON:0001048,3.07e-09,160;UBERON:0002107,4.55e-09,19;UBERON:0006925,4.55e-09,19;UBERON:0008836,4.55e-09,19;UBERON:0008835,7.44e-08,22;UBERON:0003894,7.44e-08,22;UBERON:0009854,1.61e-07,23;UBERON:0011216,5.28e-07,223;UBERON:0007499,6.25e-07,25;UBERON:0009497,6.25e-07,25;UBERON:0000015,6.25e-07,25;UBERON:0002423,6.25e-07,25;UBERON:0006235,6.25e-07,25;UBERON:0004161,6.25e-07,25|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,2.60274960087657,2.69735504124963,3.13314338848527,2.86764329104224,1.96091499683166,0.949082476444386,3.50561401216427,2.94332197688019,2.30848294167834,0,0,0,0,10.1404027857465,0.982827216677626,1.18157981336281,0,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72346158797475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0.171986032471617,1.54810130062536,1.38869702463753,0.903270027585302,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97216073266129,0,0,0,0,0,0,0,0,0,0,0,2.4913879725274,1.32506888912221,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0.80057074828547,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C768 | |||
|description=CAGE_peak_at_chr2:211542663..211542679,+ | |||
|id=chr2:211542663..211542679,+ | |||
|ontology_enrichment_celltype=CL:0002150!1.66e-10!3;CL:0000861!1.66e-10!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.12e-28;29 | |||
|ontology_enrichment_disease=DOID:305!7.61e-08!106;DOID:0050687!3.10e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.70e-10,106;DOID:0050687,2.33e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.28e-29!9;UBERON:0001557!9.57e-13!19;UBERON:0004921!1.28e-11!129;UBERON:0004185!1.28e-11!129;UBERON:0001007!3.75e-11!155;UBERON:0001555!3.75e-11!155;UBERON:0007026!3.75e-11!155;UBERON:0008947!8.27e-10!38;UBERON:0003258!8.27e-10!38;UBERON:0004119!1.31e-09!169;UBERON:0000925!1.31e-09!169;UBERON:0006595!1.31e-09!169;UBERON:0001041!5.83e-09!98;UBERON:0000072!1.25e-07!46;UBERON:0002107!3.72e-07!19;UBERON:0006925!3.72e-07!19;UBERON:0008836!3.72e-07!19;UBERON:0000077!4.81e-07!130;UBERON:0009497!9.92e-07!25;UBERON:0000015!9.92e-07!25;UBERON:0002423!9.92e-07!25;UBERON:0006235!9.92e-07!25;UBERON:0004161!9.92e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.42e-74;9!UBERON:0001557;2.42e-74;9!UBERON:0000072;1.75e-20;37!UBERON:0000065;1.67e-16;44!UBERON:0002107;4.09e-09;19!UBERON:0006925;4.09e-09;19!UBERON:0001004;1.54e-07;65!UBERON:0002423;5.77e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.66e-74,9;UBERON:0001557,6.39e-35,19;UBERON:0008947,1.66e-21,38;UBERON:0003258,1.66e-21,38;UBERON:0001041,1.24e-18,87;UBERON:0000072,3.56e-17,47;UBERON:0004921,2.61e-15,118;UBERON:0000065,8.42e-15,54;UBERON:0001007,4.32e-12,145;UBERON:0001555,4.32e-12,145;UBERON:0007026,4.32e-12,145;UBERON:0004119,9.12e-11,160;UBERON:0000925,9.12e-11,160;UBERON:0006595,9.12e-11,160;UBERON:0001004,1.74e-10,74;UBERON:0001048,3.07e-09,160;UBERON:0002107,4.55e-09,19;UBERON:0006925,4.55e-09,19;UBERON:0008836,4.55e-09,19;UBERON:0008835,7.44e-08,22;UBERON:0003894,7.44e-08,22;UBERON:0009854,1.61e-07,23;UBERON:0011216,5.28e-07,223;UBERON:0007499,6.25e-07,25;UBERON:0009497,6.25e-07,25;UBERON:0000015,6.25e-07,25;UBERON:0002423,6.25e-07,25;UBERON:0006235,6.25e-07,25;UBERON:0004161,6.25e-07,25 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0.721879481669586,2.60274960087657,2.69735504124963,3.13314338848527,2.86764329104224,1.96091499683166,0.949082476444386,3.50561401216427,2.94332197688019,2.30848294167834,0,0,0,0,10.1404027857465,0.982827216677626,1.18157981336281,0,0.122988438543114,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0.650060246036521,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72346158797475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0.171986032471617,1.54810130062536,1.38869702463753,0.903270027585302,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97216073266129,0,0,0,0,0,0,0,0,0,0,0,2.4913879725274,1.32506888912221,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0.80057074828547,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0.157771562193185,0,0,1.0580536810308,0,0,0,0,0.437062287854782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:211542663..211542679,+ | |||
}} |
Revision as of 16:23, 12 September 2013
Short description: | p@chr2:211542663..211542679, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:211542663..211542679, + |
Coexpression cluster: | C768_Hepatocyte_liver_cervical_Hep2_epitheloid_large_nonsmall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.66e-74 | 9 |
upper respiratory tract | 6.39e-35 | 19 |
respiratory primordium | 1.66e-21 | 38 |
endoderm of foregut | 1.66e-21 | 38 |
foregut | 1.24e-18 | 87 |
segment of respiratory tract | 3.56e-17 | 47 |
subdivision of digestive tract | 2.61e-15 | 118 |
respiratory tract | 8.42e-15 | 54 |
digestive system | 4.32e-12 | 145 |
digestive tract | 4.32e-12 | 145 |
primitive gut | 4.32e-12 | 145 |
endoderm-derived structure | 9.12e-11 | 160 |
endoderm | 9.12e-11 | 160 |
presumptive endoderm | 9.12e-11 | 160 |
respiratory system | 1.74e-10 | 74 |
primordium | 3.07e-09 | 160 |
liver | 4.55e-09 | 19 |
digestive gland | 4.55e-09 | 19 |
liver bud | 4.55e-09 | 19 |
hepatic diverticulum | 7.44e-08 | 22 |
liver primordium | 7.44e-08 | 22 |
digestive tract diverticulum | 1.61e-07 | 23 |
organ system subdivision | 5.28e-07 | 223 |
epithelial sac | 6.25e-07 | 25 |
epithelium of foregut-midgut junction | 6.25e-07 | 25 |
anatomical boundary | 6.25e-07 | 25 |
hepatobiliary system | 6.25e-07 | 25 |
foregut-midgut junction | 6.25e-07 | 25 |
septum transversum | 6.25e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.70e-10 | 106 |
cell type cancer | 2.33e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.