FFCP PHASE1:Mm9::chr10:28563751..28563760,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=4|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:28563751..28563760,+|id=chr10:28563751..28563760,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!7.43e-49!23;UBERON:0000974!7.43e-49!23;UBERON:0004807!7.43e-49!23;UBERON:0005058!7.43e-49!23;UBERON:0003351!7.43e-49!23;UBERON:0009113!7.43e-49!23;UBERON:0003295!7.43e-49!23;UBERON:0009722!7.43e-49!23;UBERON:0005562!7.43e-49!23;UBERON:0007690!7.43e-49!23;UBERON:0006562!9.14e-47!24;UBERON:0003408!9.14e-47!24;UBERON:0001557!9.14e-47!24;UBERON:0001042!9.14e-47!24;UBERON:0008814!9.14e-47!24;UBERON:0009145!9.14e-47!24;UBERON:0000072!2.02e-41!27;UBERON:0004177!1.79e-38!29;UBERON:0000063!1.22e-31!35;UBERON:0000065!7.62e-31!41;UBERON:0001004!4.47e-30!42;UBERON:0002390!2.73e-24!45;UBERON:0003061!2.73e-24!45;UBERON:0002193!1.11e-22!48;UBERON:0005057!2.95e-21!51;UBERON:0003929!1.34e-19!55;UBERON:0002368!7.71e-18!60;UBERON:0005911!1.02e-17!69;UBERON:0002530!2.40e-16!65;UBERON:0000490!4.48e-16!66;UBERON:0002405!4.58e-15!70;UBERON:0000949!1.33e-14!72;UBERON:0001041!6.98e-13!92;UBERON:0000077!3.93e-12!97;UBERON:0007811!5.86e-12!86;UBERON:0003081!1.20e-11!88;UBERON:0000153!8.48e-11!94;UBERON:0000064!3.63e-10!99;UBERON:0004921!6.12e-09!126;UBERON:0004185!6.12e-09!126;UBERON:0001007!9.00e-09!128;UBERON:0001555!9.00e-09!128;UBERON:0007026!9.00e-09!128;UBERON:0004119!1.31e-08!130;UBERON:0000925!1.31e-08!130;UBERON:0006595!1.31e-08!130;UBERON:0003104!1.57e-08!131;UBERON:0009142!1.57e-08!131;UBERON:0001048!2.11e-07!147;UBERON:0000477!5.57e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.61e-19,23;UBERON:0000974,1.61e-19,23;UBERON:0004807,1.61e-19,23;UBERON:0005058,1.61e-19,23;UBERON:0003351,1.61e-19,23;UBERON:0009113,1.61e-19,23;UBERON:0003295,1.61e-19,23;UBERON:0009722,1.61e-19,23;UBERON:0005562,1.61e-19,23;UBERON:0007690,1.61e-19,23;UBERON:0006562,9.72e-19,24;UBERON:0003408,9.72e-19,24;UBERON:0001557,9.72e-19,24;UBERON:0001042,9.72e-19,24;UBERON:0008814,9.72e-19,24;UBERON:0009145,9.72e-19,24;UBERON:0000072,9.73e-17,27;UBERON:0004177,1.24e-15,29;UBERON:0005057,1.24e-15,29;UBERON:0000077,4.53e-13,35;UBERON:0007811,1.00e-12,36;UBERON:0000065,2.99e-11,41;UBERON:0001004,5.35e-11,42;UBERON:0000153,9.33e-11,43;UBERON:0002390,2.64e-10,45;UBERON:0003061,2.64e-10,45;UBERON:0002193,1.07e-09,48;UBERON:0002405,1.07e-09,48;UBERON:0003929,1.55e-08,55;UBERON:0002368,7.20e-08,60;UBERON:0002530,2.65e-07,65;UBERON:0000490,3.36e-07,66;UBERON:0005911,6.58e-07,69|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0.205421914329655,0.129920822977795,0.179026695667481,0.596044064343795,0.600977247599844,0.886137163047463,1.51449674922221,0.381034033274999,1.51239277705261,1.26695244961678,1.25075394132428,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:28563751..28563760,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:28563751..28563760,+ | |||
|id=chr10:28563751..28563760,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!7.43e-49!23;UBERON:0000974!7.43e-49!23;UBERON:0004807!7.43e-49!23;UBERON:0005058!7.43e-49!23;UBERON:0003351!7.43e-49!23;UBERON:0009113!7.43e-49!23;UBERON:0003295!7.43e-49!23;UBERON:0009722!7.43e-49!23;UBERON:0005562!7.43e-49!23;UBERON:0007690!7.43e-49!23;UBERON:0006562!9.14e-47!24;UBERON:0003408!9.14e-47!24;UBERON:0001557!9.14e-47!24;UBERON:0001042!9.14e-47!24;UBERON:0008814!9.14e-47!24;UBERON:0009145!9.14e-47!24;UBERON:0000072!2.02e-41!27;UBERON:0004177!1.79e-38!29;UBERON:0000063!1.22e-31!35;UBERON:0000065!7.62e-31!41;UBERON:0001004!4.47e-30!42;UBERON:0002390!2.73e-24!45;UBERON:0003061!2.73e-24!45;UBERON:0002193!1.11e-22!48;UBERON:0005057!2.95e-21!51;UBERON:0003929!1.34e-19!55;UBERON:0002368!7.71e-18!60;UBERON:0005911!1.02e-17!69;UBERON:0002530!2.40e-16!65;UBERON:0000490!4.48e-16!66;UBERON:0002405!4.58e-15!70;UBERON:0000949!1.33e-14!72;UBERON:0001041!6.98e-13!92;UBERON:0000077!3.93e-12!97;UBERON:0007811!5.86e-12!86;UBERON:0003081!1.20e-11!88;UBERON:0000153!8.48e-11!94;UBERON:0000064!3.63e-10!99;UBERON:0004921!6.12e-09!126;UBERON:0004185!6.12e-09!126;UBERON:0001007!9.00e-09!128;UBERON:0001555!9.00e-09!128;UBERON:0007026!9.00e-09!128;UBERON:0004119!1.31e-08!130;UBERON:0000925!1.31e-08!130;UBERON:0006595!1.31e-08!130;UBERON:0003104!1.57e-08!131;UBERON:0009142!1.57e-08!131;UBERON:0001048!2.11e-07!147;UBERON:0000477!5.57e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.61e-19,23;UBERON:0000974,1.61e-19,23;UBERON:0004807,1.61e-19,23;UBERON:0005058,1.61e-19,23;UBERON:0003351,1.61e-19,23;UBERON:0009113,1.61e-19,23;UBERON:0003295,1.61e-19,23;UBERON:0009722,1.61e-19,23;UBERON:0005562,1.61e-19,23;UBERON:0007690,1.61e-19,23;UBERON:0006562,9.72e-19,24;UBERON:0003408,9.72e-19,24;UBERON:0001557,9.72e-19,24;UBERON:0001042,9.72e-19,24;UBERON:0008814,9.72e-19,24;UBERON:0009145,9.72e-19,24;UBERON:0000072,9.73e-17,27;UBERON:0004177,1.24e-15,29;UBERON:0005057,1.24e-15,29;UBERON:0000077,4.53e-13,35;UBERON:0007811,1.00e-12,36;UBERON:0000065,2.99e-11,41;UBERON:0001004,5.35e-11,42;UBERON:0000153,9.33e-11,43;UBERON:0002390,2.64e-10,45;UBERON:0003061,2.64e-10,45;UBERON:0002193,1.07e-09,48;UBERON:0002405,1.07e-09,48;UBERON:0003929,1.55e-08,55;UBERON:0002368,7.20e-08,60;UBERON:0002530,2.65e-07,65;UBERON:0000490,3.36e-07,66;UBERON:0005911,6.58e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0.205421914329655,0.129920822977795,0.179026695667481,0.596044064343795,0.600977247599844,0.886137163047463,1.51449674922221,0.381034033274999,1.51239277705261,1.26695244961678,1.25075394132428,1.16876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:28563751..28563760,+ | |||
}} |
Revision as of 16:32, 12 September 2013
Short description: | p@chr10:28563751..28563760, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:28563751..28563760, + |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.61e-19 | 23 |
neck | 1.61e-19 | 23 |
respiratory system epithelium | 1.61e-19 | 23 |
hemolymphoid system gland | 1.61e-19 | 23 |
pharyngeal epithelium | 1.61e-19 | 23 |
thymic region | 1.61e-19 | 23 |
pharyngeal gland | 1.61e-19 | 23 |
entire pharyngeal arch endoderm | 1.61e-19 | 23 |
thymus primordium | 1.61e-19 | 23 |
early pharyngeal endoderm | 1.61e-19 | 23 |
pharynx | 9.72e-19 | 24 |
gland of gut | 9.72e-19 | 24 |
upper respiratory tract | 9.72e-19 | 24 |
chordate pharynx | 9.72e-19 | 24 |
pharyngeal arch system | 9.72e-19 | 24 |
pharyngeal region of foregut | 9.72e-19 | 24 |
segment of respiratory tract | 9.73e-17 | 27 |
hemopoietic organ | 1.24e-15 | 29 |
immune organ | 1.24e-15 | 29 |
mixed endoderm/mesoderm-derived structure | 4.53e-13 | 35 |
craniocervical region | 1.00e-12 | 36 |
respiratory tract | 2.99e-11 | 41 |
respiratory system | 5.35e-11 | 42 |
anterior region of body | 9.33e-11 | 43 |
hematopoietic system | 2.64e-10 | 45 |
blood island | 2.64e-10 | 45 |
hemolymphoid system | 1.07e-09 | 48 |
immune system | 1.07e-09 | 48 |
gut epithelium | 1.55e-08 | 55 |
endocrine gland | 7.20e-08 | 60 |
gland | 2.65e-07 | 65 |
unilaminar epithelium | 3.36e-07 | 66 |
endo-epithelium | 6.58e-07 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.