FFCP PHASE1:Hg19::chr2:233246828..233246839,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=250|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=439|TSSclassifier=W|UniProt=|association_with_transcript=356bp_to_AF217992_5end|coexpression_cluster_id=C106|description=CAGE_peak_4_at_ALPP_5end|id=chr2:233246828..233246839,+|ontology_enrichment_celltype=CL:0002541!1.41e-10!3;CL:0000066!1.69e-07!254|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0002541,9.64e-07,3|ontology_enrichment_development_v019=UBERON:0008947;1.35e-45;29!UBERON:0003124;1.44e-17;1!UBERON:0006595;1.70e-08;86|ontology_enrichment_disease=DOID:305!2.57e-14!106;DOID:0050687!3.04e-11!143;DOID:178!1.84e-08!1;DOID:326!1.84e-08!1;DOID:3978!1.84e-08!1;DOID:3394!1.84e-08!1;DOID:5844!1.84e-08!1;DOID:162!2.42e-07!235;DOID:14566!4.09e-07!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,4.85e-12,106;DOID:0050687,9.97e-09,143|ontology_enrichment_uberon=UBERON:0001737!1.14e-65!9;UBERON:0001557!2.97e-37!19;UBERON:0008947!1.68e-14!38;UBERON:0003258!1.68e-14!38;UBERON:0000072!2.10e-14!46;UBERON:0000065!2.81e-12!53;UBERON:0000476!1.41e-10!3;UBERON:0000920!1.41e-10!3;UBERON:0003124!7.28e-10!7;UBERON:0001004!1.36e-08!72;UBERON:0000997!3.79e-08!1;UBERON:0005056!3.79e-08!1;UBERON:0001041!3.70e-07!98;UBERON:0000077!4.34e-07!130;UBERON:0004921!4.53e-07!129;UBERON:0004185!4.53e-07!129;UBERON:0004119!9.51e-07!169;UBERON:0000925!9.51e-07!169;UBERON:0006595!9.51e-07!169|ontology_enrichment_uberon_v019=UBERON:0001737;1.31e-147;9!UBERON:0001557;1.31e-147;9!UBERON:0000072;4.36e-33;37!UBERON:0000065;6.32e-28;44!UBERON:0001004;1.27e-14;65|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.31e-147,9;UBERON:0001557,8.65e-70,19;UBERON:0008947,1.08e-34,38;UBERON:0003258,1.08e-34,38;UBERON:0000072,5.95e-28,47;UBERON:0000065,2.94e-24,54;UBERON:0001004,1.53e-17,74;UBERON:0001041,8.02e-15,87;UBERON:0004921,1.21e-10,118;UBERON:0003124,2.97e-10,7;UBERON:0004119,1.65e-09,160;UBERON:0000925,1.65e-09,160;UBERON:0006595,1.65e-09,160;UBERON:0001007,1.56e-08,145;UBERON:0001555,1.56e-08,145;UBERON:0007026,1.56e-08,145;UBERON:0001048,1.03e-07,160;UBERON:0000920,9.64e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.34623720314767,7.41772636343647,5.06123162755312,7.72057809126758,6.10062443458737,4.27087114399974,4.98875840192608,5.29797955838434,7.69494313892781,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1531308121143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p4@ALPP}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=250 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=439 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=356bp_to_AF217992_5end | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_4_at_ALPP_5end | |||
|id=chr2:233246828..233246839,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.41e-10!3;CL:0000066!1.69e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.35e-45;29!UBERON:0003124;1.44e-17;1!UBERON:0006595;1.70e-08;86 | |||
|ontology_enrichment_disease=DOID:305!2.57e-14!106;DOID:0050687!3.04e-11!143;DOID:178!1.84e-08!1;DOID:326!1.84e-08!1;DOID:3978!1.84e-08!1;DOID:3394!1.84e-08!1;DOID:5844!1.84e-08!1;DOID:162!2.42e-07!235;DOID:14566!4.09e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.85e-12,106;DOID:0050687,9.97e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.14e-65!9;UBERON:0001557!2.97e-37!19;UBERON:0008947!1.68e-14!38;UBERON:0003258!1.68e-14!38;UBERON:0000072!2.10e-14!46;UBERON:0000065!2.81e-12!53;UBERON:0000476!1.41e-10!3;UBERON:0000920!1.41e-10!3;UBERON:0003124!7.28e-10!7;UBERON:0001004!1.36e-08!72;UBERON:0000997!3.79e-08!1;UBERON:0005056!3.79e-08!1;UBERON:0001041!3.70e-07!98;UBERON:0000077!4.34e-07!130;UBERON:0004921!4.53e-07!129;UBERON:0004185!4.53e-07!129;UBERON:0004119!9.51e-07!169;UBERON:0000925!9.51e-07!169;UBERON:0006595!9.51e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.31e-147;9!UBERON:0001557;1.31e-147;9!UBERON:0000072;4.36e-33;37!UBERON:0000065;6.32e-28;44!UBERON:0001004;1.27e-14;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.31e-147,9;UBERON:0001557,8.65e-70,19;UBERON:0008947,1.08e-34,38;UBERON:0003258,1.08e-34,38;UBERON:0000072,5.95e-28,47;UBERON:0000065,2.94e-24,54;UBERON:0001004,1.53e-17,74;UBERON:0001041,8.02e-15,87;UBERON:0004921,1.21e-10,118;UBERON:0003124,2.97e-10,7;UBERON:0004119,1.65e-09,160;UBERON:0000925,1.65e-09,160;UBERON:0006595,1.65e-09,160;UBERON:0001007,1.56e-08,145;UBERON:0001555,1.56e-08,145;UBERON:0007026,1.56e-08,145;UBERON:0001048,1.03e-07,160;UBERON:0000920,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.34623720314767,7.41772636343647,5.06123162755312,7.72057809126758,6.10062443458737,4.27087114399974,4.98875840192608,5.29797955838434,7.69494313892781,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0.366390373607449,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0.489473409012935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1531308121143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p4@ALPP | |||
}} |
Revision as of 17:24, 12 September 2013
Short description: | p4@ALPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ALPP_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 356bp_to_AF217992_5end |
EntrezGene: | ALPP |
HGNC: | 439 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.31e-147 | 9 |
upper respiratory tract | 8.65e-70 | 19 |
respiratory primordium | 1.08e-34 | 38 |
endoderm of foregut | 1.08e-34 | 38 |
segment of respiratory tract | 5.95e-28 | 47 |
respiratory tract | 2.94e-24 | 54 |
respiratory system | 1.53e-17 | 74 |
foregut | 8.02e-15 | 87 |
subdivision of digestive tract | 1.21e-10 | 118 |
chorion | 2.97e-10 | 7 |
endoderm-derived structure | 1.65e-09 | 160 |
endoderm | 1.65e-09 | 160 |
presumptive endoderm | 1.65e-09 | 160 |
digestive system | 1.56e-08 | 145 |
digestive tract | 1.56e-08 | 145 |
primitive gut | 1.56e-08 | 145 |
primordium | 1.03e-07 | 160 |
egg chorion | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.85e-12 | 106 |
cell type cancer | 9.97e-09 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.