FFCP PHASE1:Hg19::chr2:30864461..30864472,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=253558|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=26756|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_AK023269_5end|coexpression_cluster_id=C102|description=CAGE_peak_11_at_LCLAT1_5end|id=chr2:30864461..30864472,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000346;5.96e-34;3!CL:1000428;5.96e-34;3!CL:0000333;4.21e-21;5!CL:0002559;5.15e-21;5!CL:0002321;5.55e-08;15|ontology_enrichment_celltype_v019_2=CL:0000346,5.96e-34,3;CL:1000428,5.96e-34,3;CL:0002559,5.15e-21,5;CL:0000333,1.77e-10,41;CL:0000133,9.44e-08,59|ontology_enrichment_development_v019=CL:0000221;1.59e-09;72!CL:0000133;7.96e-07;59|ontology_enrichment_disease=DOID:0050687!1.38e-16!143;DOID:14566!2.01e-15!239;DOID:162!1.01e-14!235;DOID:305!1.01e-11!106|ontology_enrichment_disease_v019=DOID:169;7.67e-18;6!DOID:171;2.73e-11;10|ontology_enrichment_disease_v019_2=DOID:169,7.67e-18,6;DOID:171,2.73e-11,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000412;5.96e-34;3!UBERON:0001992;5.96e-34;3!UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0002073;5.15e-21;5!UBERON:0000010;2.19e-12;8!UBERON:0002067;2.45e-12;9!UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0000412,5.96e-34,3;UBERON:0001992,5.96e-34,3;UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0002073,5.15e-21,5;UBERON:0005086,5.15e-21,5;UBERON:0000010,2.19e-12,8;UBERON:0002067,2.45e-12,9;UBERON:0004016,2.45e-12,9;UBERON:0010083,2.45e-12,9;UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0.675105328965065,0.194874010322397,0,0.0920498986422993,0,0,0,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,1.28648187638577,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0.251932747854276,0.20453736500431,0,0,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0.37950746544837,0,0,0.652931232636591,0.282706142867882,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0.518440956986236,0,0.330991955875499,0,0,0.284609546029793,0.416024019039416,0.173559738335131,0,0.0870592065804026,0,0.343972064943233,0.0967563312890851,0,0.0821154570532092,0,0,0,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=253558 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26756 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AK023269_5end | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_11_at_LCLAT1_5end | |||
|id=chr2:30864461..30864472,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000346;5.96e-34;3!CL:1000428;5.96e-34;3!CL:0000333;4.21e-21;5!CL:0002559;5.15e-21;5!CL:0002321;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,5.96e-34,3;CL:1000428,5.96e-34,3;CL:0002559,5.15e-21,5;CL:0000333,1.77e-10,41;CL:0000133,9.44e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000221;1.59e-09;72!CL:0000133;7.96e-07;59 | |||
|ontology_enrichment_disease=DOID:0050687!1.38e-16!143;DOID:14566!2.01e-15!239;DOID:162!1.01e-14!235;DOID:305!1.01e-11!106 | |||
|ontology_enrichment_disease_v019=DOID:169;7.67e-18;6!DOID:171;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.67e-18,6;DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;5.96e-34;3!UBERON:0001992;5.96e-34;3!UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0002073;5.15e-21;5!UBERON:0000010;2.19e-12;8!UBERON:0002067;2.45e-12;9!UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,5.96e-34,3;UBERON:0001992,5.96e-34,3;UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0002073,5.15e-21,5;UBERON:0005086,5.15e-21,5;UBERON:0000010,2.19e-12,8;UBERON:0002067,2.45e-12,9;UBERON:0004016,2.45e-12,9;UBERON:0010083,2.45e-12,9;UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0.675105328965065,0.194874010322397,0,0.0920498986422993,0,0,0,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,1.28648187638577,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.214840489736547,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0.251932747854276,0.20453736500431,0,0,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0.37950746544837,0,0,0.652931232636591,0.282706142867882,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0.518440956986236,0,0.330991955875499,0,0,0.284609546029793,0.416024019039416,0.173559738335131,0,0.0870592065804026,0,0.343972064943233,0.0967563312890851,0,0.0821154570532092,0,0,0,0.137041924646751,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0.213383459388282,0,0,0,0,0,0.127894371303652,5.60689019262745,0.314531883711793,0.436838552768056,0,0.212574920101683,0,0,0.318004350653419,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0.118193840883968,0.444925607568277,0,0,0,0,0.215927591218621,0.47775168788705,0,0.316027223465453,0,0.173858272302579,0,0,0,0,0,0,0.170426809518315,0,0,0.31020638566432,0,0.111855431797792,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0,0.150962843566674,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0.71421575442263,0,0.401206833445841,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.218531143927391,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@LCLAT1 | |||
}} |
Revision as of 18:18, 12 September 2013
Short description: | p11@LCLAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_LCLAT1_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | 0bp_to_AK023269_5end |
EntrezGene: | LCLAT1 |
HGNC: | 26756 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 5.96e-34 | 3 |
stem cell of epidermis | 5.96e-34 | 3 |
hair follicle cell | 5.15e-21 | 5 |
migratory neural crest cell | 1.77e-10 | 41 |
neurectodermal cell | 9.44e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 5.96e-34 | 3 |
papillary layer of dermis | 5.96e-34 | 3 |
sympathetic nervous system | 4.21e-21 | 5 |
autonomic nervous system | 4.21e-21 | 5 |
hair follicle | 5.15e-21 | 5 |
hair follicle placode | 5.15e-21 | 5 |
peripheral nervous system | 2.19e-12 | 8 |
dermis | 2.45e-12 | 9 |
dermatome | 2.45e-12 | 9 |
future dermis | 2.45e-12 | 9 |
skin epidermis | 5.93e-08 | 15 |
outer epithelium | 5.93e-08 | 15 |
enveloping layer of ectoderm | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.67e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |
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