FFCP PHASE1:Mm9::chr11:32542706..32542821,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=103583|HGNC=|UniProt=Q8CHD5,Q5SRY7|association_with_transcript=0bp_to_ENSMUST00000082313,ENSMUST00000109366,ENSMUST00000137898_5end|description=CAGE_peak_1_at_Fbxw11_5end|id=chr11:32542706..32542821,+|ontology_enrichment_celltype=CL:0002321!1.69e-14!70;CL:0000220!1.69e-14!70;CL:0000540!5.21e-14!33;CL:0000047!5.21e-14!33;CL:0000031!5.21e-14!33;CL:0000404!5.21e-14!33;CL:0000221!9.01e-14!44;CL:0000133!9.01e-14!44;CL:0002319!1.89e-13!43;CL:0000393!5.38e-13!39;CL:0000211!5.38e-13!39;CL:0000055!6.19e-13!50;CL:0000117!1.37e-12!23;CL:0000337!1.37e-12!23;CL:0000144!1.15e-09!121;CL:0000012!1.15e-09!121;CL:0002371!1.29e-08!118;CL:0000548!8.43e-08!115;CL:0000004!8.43e-08!115;CL:0000255!8.43e-08!115|ontology_enrichment_celltype_v019_2=CL:0002321,1.69e-14,70;CL:0000540,5.21e-14,33;CL:0000047,5.21e-14,33;CL:0000031,5.21e-14,33;CL:0000404,5.21e-14,33;CL:0000221,9.01e-14,44;CL:0000133,9.01e-14,44;CL:0002319,1.89e-13,43;CL:0000393,5.38e-13,39;CL:0000211,5.38e-13,39;CL:0000117,1.37e-12,23;CL:0000337,1.37e-12,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.13e-23!75;UBERON:0001016!1.13e-23!75;UBERON:0001017!1.66e-22!73;UBERON:0005743!1.66e-22!73;UBERON:0001049!1.33e-18!52;UBERON:0005068!1.33e-18!52;UBERON:0006241!1.33e-18!52;UBERON:0007135!1.33e-18!52;UBERON:0004121!1.56e-18!102;UBERON:0000924!1.56e-18!102;UBERON:0006601!1.56e-18!102;UBERON:0002346!4.69e-17!71;UBERON:0003075!4.69e-17!71;UBERON:0007284!4.69e-17!71;UBERON:0002616!8.99e-17!49;UBERON:0000955!1.11e-16!50;UBERON:0006238!1.11e-16!50;UBERON:0002020!1.18e-14!34;UBERON:0000033!4.42e-14!63;UBERON:0003080!5.59e-13!40;UBERON:0002780!1.21e-12!39;UBERON:0001890!1.21e-12!39;UBERON:0006240!1.21e-12!39;UBERON:0002791!6.59e-12!29;UBERON:0003528!6.59e-12!29;UBERON:0001893!6.59e-12!29;UBERON:0003056!6.21e-11!49;UBERON:0007811!1.48e-10!86;UBERON:0000153!1.74e-09!94;UBERON:0000956!2.32e-08!21;UBERON:0001869!2.32e-08!21;UBERON:0000203!2.32e-08!21;UBERON:0000064!4.91e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.13e-23,75;UBERON:0001017,1.66e-22,73;UBERON:0000073,1.19e-19,54;UBERON:0001049,1.33e-18,52;UBERON:0005068,1.33e-18,52;UBERON:0006241,1.33e-18,52;UBERON:0007135,1.33e-18,52;UBERON:0004121,5.06e-18,95;UBERON:0000924,5.06e-18,95;UBERON:0006601,5.06e-18,95;UBERON:0002346,6.98e-17,64;UBERON:0003075,6.98e-17,64;UBERON:0007284,6.98e-17,64;UBERON:0002616,3.42e-15,46;UBERON:0000955,4.17e-15,47;UBERON:0006238,4.17e-15,47;UBERON:0002020,1.18e-14,34;UBERON:0010371,2.46e-14,73;UBERON:0003080,5.59e-13,40;UBERON:0010314,9.73e-13,92;UBERON:0002780,1.21e-12,39;UBERON:0001890,1.21e-12,39;UBERON:0006240,1.21e-12,39;UBERON:0003528,6.59e-12,29;UBERON:0002791,6.59e-12,29;UBERON:0001893,6.59e-12,29;UBERON:0003056,6.21e-11,49;UBERON:0000956,2.32e-08,21;UBERON:0001869,2.32e-08,21;UBERON:0000203,2.32e-08,21|phase1_expression=46.2830168132855,129.120900826564,131.039780944186,69.8692328118777,75.1343594919521,59.7650208006328,59.103998070668,36.6710238574077,109.252048389693,99.0092946342032,46.0576334526608,45.8689914223184,26.5361131393369,24.9148146894143,24.9832321361747,20.6524772737622,11.8925519281785,29.0225192129579,33.7301506670117,30.1316652776601,35.7181818634493,25.3191925562258,32.9111734315059,40.6380753895253,45.6524469323668,115.994856751234,92.6138291742011,81.2326547225802,30.7837939519326,42.3410617996684,47.4503292802352,24.7661962649256,21.52726756546,47.5445043046316,23.9746844393558,27.5949511295097,32.6670970019791,61.5241497183254,41.4107732597614,57.064088093144,85.2935657644971,71.0367304356784,58.2612423637384,36.2582835769663,43.2879496307327,35.6080699193662,39.90195856175,38.1544023665781,55.8002904145558,42.1912880991195,33.0367955035856,28.7505128729943,49.66365139309,44.247090662692,33.2732861151039,42.7050663819672,28.6533439938757,40.2224231976405,71.417710683438,68.2398363260922,63.3831403506179,31.8513860144984,32.9039074561122,30.1466405289269,21.7550599764734,24.1563239081674,42.8428158041319,27.2794996778304,62.3174569973951,54.8124109626664,60.1529389464953,65.1284244440672,58.7510318931292,56.8357308357387,52.1399362339206,56.0723459832113,55.0579404996944,69.9726612706829,61.7498263690099,61.4590100822703,61.2052335700121,68.2396515429356,54.4406848052693,57.964548833263,55.4657639429821,67.4699460734699,59.6537342548241,67.8493982804094,58.0819902865522,64.840398571622,60.5816781386507,42.1607699720879,48.957936026958,29.6836755400799,21.4426217757731,27.3296401129375,24.0159958425296,22.4968025803036,17.4056623083922,20.4936953215997,49.8585706009449,57.746914836443,53.5091003383956,85.3280043783997,34.6385665617943,38.0039798212648,35.3867111510348,29.9161764863937,31.5904218049549,52.6969593680128,32.7887267587997,29.2286859179656,45.6618684566996,42.9559525574974,43.6254103473465,40.8416421821445,39.3039998697654,26.172483602504,26.5383165584962,36.3975412381671,29.5927634736927,27.1530141755724,11.1835056730873,92.5187318556489,127.553044449394,33.9757883427427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| ||
|EntrezGene=103583 | |||
|HGNC= | |||
|UniProt=Q8CHD5,Q5SRY7 | |||
|association_with_transcript=0bp_to_ENSMUST00000082313,ENSMUST00000109366,ENSMUST00000137898_5end | |||
|description=CAGE_peak_1_at_Fbxw11_5end | |||
|id=chr11:32542706..32542821,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.69e-14!70;CL:0000220!1.69e-14!70;CL:0000540!5.21e-14!33;CL:0000047!5.21e-14!33;CL:0000031!5.21e-14!33;CL:0000404!5.21e-14!33;CL:0000221!9.01e-14!44;CL:0000133!9.01e-14!44;CL:0002319!1.89e-13!43;CL:0000393!5.38e-13!39;CL:0000211!5.38e-13!39;CL:0000055!6.19e-13!50;CL:0000117!1.37e-12!23;CL:0000337!1.37e-12!23;CL:0000144!1.15e-09!121;CL:0000012!1.15e-09!121;CL:0002371!1.29e-08!118;CL:0000548!8.43e-08!115;CL:0000004!8.43e-08!115;CL:0000255!8.43e-08!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.69e-14,70;CL:0000540,5.21e-14,33;CL:0000047,5.21e-14,33;CL:0000031,5.21e-14,33;CL:0000404,5.21e-14,33;CL:0000221,9.01e-14,44;CL:0000133,9.01e-14,44;CL:0002319,1.89e-13,43;CL:0000393,5.38e-13,39;CL:0000211,5.38e-13,39;CL:0000117,1.37e-12,23;CL:0000337,1.37e-12,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.13e-23!75;UBERON:0001016!1.13e-23!75;UBERON:0001017!1.66e-22!73;UBERON:0005743!1.66e-22!73;UBERON:0001049!1.33e-18!52;UBERON:0005068!1.33e-18!52;UBERON:0006241!1.33e-18!52;UBERON:0007135!1.33e-18!52;UBERON:0004121!1.56e-18!102;UBERON:0000924!1.56e-18!102;UBERON:0006601!1.56e-18!102;UBERON:0002346!4.69e-17!71;UBERON:0003075!4.69e-17!71;UBERON:0007284!4.69e-17!71;UBERON:0002616!8.99e-17!49;UBERON:0000955!1.11e-16!50;UBERON:0006238!1.11e-16!50;UBERON:0002020!1.18e-14!34;UBERON:0000033!4.42e-14!63;UBERON:0003080!5.59e-13!40;UBERON:0002780!1.21e-12!39;UBERON:0001890!1.21e-12!39;UBERON:0006240!1.21e-12!39;UBERON:0002791!6.59e-12!29;UBERON:0003528!6.59e-12!29;UBERON:0001893!6.59e-12!29;UBERON:0003056!6.21e-11!49;UBERON:0007811!1.48e-10!86;UBERON:0000153!1.74e-09!94;UBERON:0000956!2.32e-08!21;UBERON:0001869!2.32e-08!21;UBERON:0000203!2.32e-08!21;UBERON:0000064!4.91e-07!99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.13e-23,75;UBERON:0001017,1.66e-22,73;UBERON:0000073,1.19e-19,54;UBERON:0001049,1.33e-18,52;UBERON:0005068,1.33e-18,52;UBERON:0006241,1.33e-18,52;UBERON:0007135,1.33e-18,52;UBERON:0004121,5.06e-18,95;UBERON:0000924,5.06e-18,95;UBERON:0006601,5.06e-18,95;UBERON:0002346,6.98e-17,64;UBERON:0003075,6.98e-17,64;UBERON:0007284,6.98e-17,64;UBERON:0002616,3.42e-15,46;UBERON:0000955,4.17e-15,47;UBERON:0006238,4.17e-15,47;UBERON:0002020,1.18e-14,34;UBERON:0010371,2.46e-14,73;UBERON:0003080,5.59e-13,40;UBERON:0010314,9.73e-13,92;UBERON:0002780,1.21e-12,39;UBERON:0001890,1.21e-12,39;UBERON:0006240,1.21e-12,39;UBERON:0003528,6.59e-12,29;UBERON:0002791,6.59e-12,29;UBERON:0001893,6.59e-12,29;UBERON:0003056,6.21e-11,49;UBERON:0000956,2.32e-08,21;UBERON:0001869,2.32e-08,21;UBERON:0000203,2.32e-08,21 | |||
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| |||
|short_description=p1@Fbxw11 | |||
}} |
Revision as of 19:30, 12 September 2013
Short description: | p1@Fbxw11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fbxw11_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000082313, ENSMUST00000109366, ENSMUST00000137898_5end |
EntrezGene: | Fbxw11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.69e-14 | 70 |
neuron | 5.21e-14 | 33 |
neuronal stem cell | 5.21e-14 | 33 |
neuroblast | 5.21e-14 | 33 |
electrically signaling cell | 5.21e-14 | 33 |
ectodermal cell | 9.01e-14 | 44 |
neurectodermal cell | 9.01e-14 | 44 |
neural cell | 1.89e-13 | 43 |
electrically responsive cell | 5.38e-13 | 39 |
electrically active cell | 5.38e-13 | 39 |
CNS neuron (sensu Vertebrata) | 1.37e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.37e-12 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.13e-23 | 75 |
central nervous system | 1.66e-22 | 73 |
regional part of nervous system | 1.19e-19 | 54 |
neural tube | 1.33e-18 | 52 |
neural rod | 1.33e-18 | 52 |
future spinal cord | 1.33e-18 | 52 |
neural keel | 1.33e-18 | 52 |
ectoderm-derived structure | 5.06e-18 | 95 |
ectoderm | 5.06e-18 | 95 |
presumptive ectoderm | 5.06e-18 | 95 |
neurectoderm | 6.98e-17 | 64 |
neural plate | 6.98e-17 | 64 |
presumptive neural plate | 6.98e-17 | 64 |
regional part of brain | 3.42e-15 | 46 |
brain | 4.17e-15 | 47 |
future brain | 4.17e-15 | 47 |
gray matter | 1.18e-14 | 34 |
ecto-epithelium | 2.46e-14 | 73 |
anterior neural tube | 5.59e-13 | 40 |
structure with developmental contribution from neural crest | 9.73e-13 | 92 |
regional part of forebrain | 1.21e-12 | 39 |
forebrain | 1.21e-12 | 39 |
future forebrain | 1.21e-12 | 39 |
brain grey matter | 6.59e-12 | 29 |
regional part of telencephalon | 6.59e-12 | 29 |
telencephalon | 6.59e-12 | 29 |
pre-chordal neural plate | 6.21e-11 | 49 |
cerebral cortex | 2.32e-08 | 21 |
cerebral hemisphere | 2.32e-08 | 21 |
pallium | 2.32e-08 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.