FFCP PHASE1:Mm9::chr11:72363732..72363746,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=77577|HGNC=|MCL_coexpression_id=115|UniProt=Q9D232|association_with_transcript=1bp_to_NM_029932,uc007jzb.1,uc011xyk.1_5end|description=CAGE_peak_1_at_Spns3_5end|id=chr11:72363732..72363746,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,2.81e-09,19;CL:0000988,9.68e-08,32;CL:0002032,9.68e-08,32;CL:0000037,9.68e-08,32;CL:0000837,9.68e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!3.56e-15!70;UBERON:0002193!3.41e-13!48;UBERON:0002390!9.26e-12!45;UBERON:0003061!9.26e-12!45;UBERON:0005057!2.23e-10!51;UBERON:0004177!9.18e-09!29;UBERON:0001041!3.11e-08!92;UBERON:0000077!1.52e-07!97;UBERON:0003081!9.02e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.35e-21,45;UBERON:0003061,2.35e-21,45;UBERON:0002193,3.71e-21,48;UBERON:0002405,3.71e-21,48;UBERON:0004177,3.85e-15,29;UBERON:0005057,3.85e-15,29;UBERON:0000077,1.13e-11,35;UBERON:0003081,3.95e-11,87;UBERON:0002370,2.99e-10,23;UBERON:0000974,2.99e-10,23;UBERON:0004807,2.99e-10,23;UBERON:0005058,2.99e-10,23;UBERON:0003351,2.99e-10,23;UBERON:0009113,2.99e-10,23;UBERON:0003295,2.99e-10,23;UBERON:0009722,2.99e-10,23;UBERON:0005562,2.99e-10,23;UBERON:0007690,2.99e-10,23;UBERON:0006562,1.11e-09,24;UBERON:0003408,1.11e-09,24;UBERON:0001557,1.11e-09,24;UBERON:0001042,1.11e-09,24;UBERON:0008814,1.11e-09,24;UBERON:0009145,1.11e-09,24;UBERON:0001474,1.30e-08,22;UBERON:0004765,1.30e-08,22;UBERON:0001434,1.30e-08,22;UBERON:0000490,1.33e-08,66;UBERON:0003929,2.42e-08,55;UBERON:0002204,2.73e-08,32;UBERON:0000072,3.15e-08,27;UBERON:0000926,7.41e-08,120;UBERON:0004120,7.41e-08,120;UBERON:0006603,7.41e-08,120;UBERON:0001041,1.37e-07,80;UBERON:0002368,3.36e-07,60;UBERON:0002371,5.24e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,2.99798785634096,1.21485160433896,0.699561878128147,6.62470547252299,6.7186072466812,8.91218268775863,0.17008658030214,15.7872612409408,22.7243816550874,0.47997726838022,0.91763712426868,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,5.85944283031671,2.3440060335714,6.28228492768558,3.52938892818609,2.04913645487534,2.91306211818692,0,0,0,0,0,0,0,0,0,4.36234775750115,0,0.336093799142464,0,0,0,0,0,0,0,0,0,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.84831672011889,0,0.520455980298408,0,0,0,0,0,0,0,7.96149496754887,0.970601099684455,5.07935492458905,6.30337829075789,0,0,0,0,36.7832432233175,23.9961092397363,37.8669276677733,0,0,0,0,0,0,0,0,6.46916247172484,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,16.1509033082044,23.9333553616685,38.0779089190094,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,1.16791574001266,0.786235980452812,1.12431056192427,1.62288097110802,1.4470629585145,1.52775511068852,3.16465751195892,1.29708181420028,1.92192989231657,0,0.744281895337007,1.87222603868736,0.505157755894224,0,0,0.554259570499814,0.37898282354097,0,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0.491589944147214,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,3.93003025835061,0.82554747185289,2.59272338317596,6.40452753815949,6.01454601972511,5.94823250336959,33.1457938488018,34.5680087239435,26.6725949442538,0.954670618015114,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0.404593039154462,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,4.74016680942267,7.09538253515575,6.16265742988964,4.41730798124503,3.93858730468459,2.38417625737518,3.24527713703916,2.65841148914239,2.82706059854813,3.88654713940499,2.21817607301049,3.8983152295901,4.13710919053417,7.01261413089414,0,0,0,0,0,0,0.73260649706906,0.428736758158132,0,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0,0.294397840268795,0.685738504770831,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0.382576664137687,1.76473135295612,1.15933917810211|short_description=p1@Spns3}} | ||
|EntrezGene=77577 | |||
|HGNC= | |||
|MCL_coexpression_id=115 | |||
|UniProt=Q9D232 | |||
|association_with_transcript=1bp_to_NM_029932,uc007jzb.1,uc011xyk.1_5end | |||
|description=CAGE_peak_1_at_Spns3_5end | |||
|id=chr11:72363732..72363746,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,2.81e-09,19;CL:0000988,9.68e-08,32;CL:0002032,9.68e-08,32;CL:0000037,9.68e-08,32;CL:0000837,9.68e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.56e-15!70;UBERON:0002193!3.41e-13!48;UBERON:0002390!9.26e-12!45;UBERON:0003061!9.26e-12!45;UBERON:0005057!2.23e-10!51;UBERON:0004177!9.18e-09!29;UBERON:0001041!3.11e-08!92;UBERON:0000077!1.52e-07!97;UBERON:0003081!9.02e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.35e-21,45;UBERON:0003061,2.35e-21,45;UBERON:0002193,3.71e-21,48;UBERON:0002405,3.71e-21,48;UBERON:0004177,3.85e-15,29;UBERON:0005057,3.85e-15,29;UBERON:0000077,1.13e-11,35;UBERON:0003081,3.95e-11,87;UBERON:0002370,2.99e-10,23;UBERON:0000974,2.99e-10,23;UBERON:0004807,2.99e-10,23;UBERON:0005058,2.99e-10,23;UBERON:0003351,2.99e-10,23;UBERON:0009113,2.99e-10,23;UBERON:0003295,2.99e-10,23;UBERON:0009722,2.99e-10,23;UBERON:0005562,2.99e-10,23;UBERON:0007690,2.99e-10,23;UBERON:0006562,1.11e-09,24;UBERON:0003408,1.11e-09,24;UBERON:0001557,1.11e-09,24;UBERON:0001042,1.11e-09,24;UBERON:0008814,1.11e-09,24;UBERON:0009145,1.11e-09,24;UBERON:0001474,1.30e-08,22;UBERON:0004765,1.30e-08,22;UBERON:0001434,1.30e-08,22;UBERON:0000490,1.33e-08,66;UBERON:0003929,2.42e-08,55;UBERON:0002204,2.73e-08,32;UBERON:0000072,3.15e-08,27;UBERON:0000926,7.41e-08,120;UBERON:0004120,7.41e-08,120;UBERON:0006603,7.41e-08,120;UBERON:0001041,1.37e-07,80;UBERON:0002368,3.36e-07,60;UBERON:0002371,5.24e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,2.99798785634096,1.21485160433896,0.699561878128147,6.62470547252299,6.7186072466812,8.91218268775863,0.17008658030214,15.7872612409408,22.7243816550874,0.47997726838022,0.91763712426868,0,0,0,0,0.504060259519861,0,0,0,0,0,0,0,5.85944283031671,2.3440060335714,6.28228492768558,3.52938892818609,2.04913645487534,2.91306211818692,0,0,0,0,0,0,0,0,0,4.36234775750115,0,0.336093799142464,0,0,0,0,0,0,0,0,0,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.34255163915718,2.84831672011889,0,0.520455980298408,0,0,0,0,0,0,0,7.96149496754887,0.970601099684455,5.07935492458905,6.30337829075789,0,0,0,0,36.7832432233175,23.9961092397363,37.8669276677733,0,0,0,0,0,0,0,0,6.46916247172484,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,16.1509033082044,23.9333553616685,38.0779089190094,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0.432276099749388,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,1.16791574001266,0.786235980452812,1.12431056192427,1.62288097110802,1.4470629585145,1.52775511068852,3.16465751195892,1.29708181420028,1.92192989231657,0,0.744281895337007,1.87222603868736,0.505157755894224,0,0,0.554259570499814,0.37898282354097,0,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0.491589944147214,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,0,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,3.93003025835061,0.82554747185289,2.59272338317596,6.40452753815949,6.01454601972511,5.94823250336959,33.1457938488018,34.5680087239435,26.6725949442538,0.954670618015114,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0.404593039154462,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,4.74016680942267,7.09538253515575,6.16265742988964,4.41730798124503,3.93858730468459,2.38417625737518,3.24527713703916,2.65841148914239,2.82706059854813,3.88654713940499,2.21817607301049,3.8983152295901,4.13710919053417,7.01261413089414,0,0,0,0,0,0,0.73260649706906,0.428736758158132,0,0,0,0,0.343706364687375,0,0,0,0,0.453142408984205,0,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0,0,0.294397840268795,0.685738504770831,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0.382576664137687,1.76473135295612,1.15933917810211 | |||
|short_description=p1@Spns3 | |||
}} |
Revision as of 20:49, 12 September 2013
Short description: | p1@Spns3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Spns3_5end |
Coexpression cluster: | MCL_coexpression_mm9:115 |
Association with transcript: | 1bp_to_NM_029932, uc007jzb.1, uc011xyk.1_5end |
EntrezGene: | Spns3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 2.81e-09 | 19 |
hematopoietic cell | 9.68e-08 | 32 |
hematopoietic oligopotent progenitor cell | 9.68e-08 | 32 |
hematopoietic stem cell | 9.68e-08 | 32 |
hematopoietic multipotent progenitor cell | 9.68e-08 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.