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FFCP PHASE1:Mm9::chr11:74537834..74537895,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=18472|HGNC=|MCL_coexpression_id=1585|UniProt=P63005,Q5SW18,Q3UHM0|association_with_transcript=0bp_to_ENSMUST00000126341,NM_013625,uc007kcd.2,uc011xyy.1_5end|description=CAGE_peak_1_at_Pafah1b1_5end|id=chr11:74537834..74537895,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!8.98e-09!34;UBERON:0000073!2.73e-08!75;UBERON:0001016!2.73e-08!75;UBERON:0001049!5.36e-08!52;UBERON:0005068!5.36e-08!52;UBERON:0006241!5.36e-08!52;UBERON:0007135!5.36e-08!52;UBERON:0000955!9.96e-08!50;UBERON:0006238!9.96e-08!50;UBERON:0001017!1.05e-07!73;UBERON:0005743!1.05e-07!73;UBERON:0002616!2.35e-07!49;UBERON:0002021!3.59e-07!10;UBERON:0000411!3.59e-07!10;UBERON:0001950!3.59e-07!10;UBERON:0007811!3.99e-07!86;UBERON:0002791!5.17e-07!29;UBERON:0003528!5.17e-07!29;UBERON:0001893!5.17e-07!29;UBERON:0000483!5.62e-07!181;UBERON:0004121!7.71e-07!102;UBERON:0000924!7.71e-07!102;UBERON:0006601!7.71e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.22e-09,54;UBERON:0010314,5.52e-09,92;UBERON:0002020,8.98e-09,34;UBERON:0001016,2.73e-08,75;UBERON:0001049,5.36e-08,52;UBERON:0005068,5.36e-08,52;UBERON:0006241,5.36e-08,52;UBERON:0007135,5.36e-08,52;UBERON:0001017,1.05e-07,73;UBERON:0004121,2.26e-07,95;UBERON:0000924,2.26e-07,95;UBERON:0006601,2.26e-07,95;UBERON:0000483,2.97e-07,174;UBERON:0002021,3.59e-07,10;UBERON:0000411,3.59e-07,10;UBERON:0001950,3.59e-07,10;UBERON:0010371,5.00e-07,73;UBERON:0003528,5.17e-07,29;UBERON:0002791,5.17e-07,29;UBERON:0001893,5.17e-07,29;UBERON:0002346,6.14e-07,64;UBERON:0003075,6.14e-07,64;UBERON:0007284,6.14e-07,64|phase1_expression=88.2420147547415,168.904097297451,175.174707164971,154.861676189097,185.832315810095,76.5529479918218,68.2148910538935,73.9876643320232,104.74680928084,117.968521266285,45.7151975162098,47.5442067612205,72.4179087609,82.6997006883715,65.6226230776856,66.4118877038629,84.6469872535057,75.0799953552606,76.2356250847908,76.8145269754435,76.2838312655096,56.0000964772993,49.3667601472588,65.7568857680901,66.2992822284121,130.924887818225,116.736500959109,98.0394108720795,75.8193443630932,99.0478409956528,67.4060752392126,22.8611042445467,15.9916844771988,0,45.9274075404527,36.2391526881513,45.1214277339836,173.690626755817,142.984368047855,168.051121815589,195.292854026297,190.569690303406,187.406996270025,61.3117503541061,65.1853667741479,64.0578165044269,26.6013057078333,40.1166287740022,31.8544964964984,54.8292315389479,40.4560758497298,25.8754615856949,102.682954907335,93.5717163194634,91.0814195676077,73.8334581423168,81.6620303825457,97.4620254404366,75.2617234397704,65.5948814297321,47.5373552629634,37.6117430596737,27.5681386794453,34.6461391153339,33.6214563272771,34.8135256323589,20.3728075152515,30.7374644257244,83.9885859698669,60.8876781875925,68.1452874778478,97.406985681697,85.6969938892261,79.86400108815,74.6636219232061,40.4456266108409,176.185409599022,216.046976040138,213.513081226178,73.3287759779878,88.1026007891205,90.1180131063195,145.454342479719,149.694854268427,168.994862041152,132.58286346315,150.629238285451,109.975673036927,107.531194533121,95.9003097755108,106.380267353516,68.8339101585109,80.9165887112223,63.1452734216246,49.3830077260229,47.0428231452202,62.9191002190248,44.6527445154511,46.5016948239135,42.4007489412408,78.449784815611,102.661181931454,109.566253073858,163.545341725266,36.1540038488728,31.9233430498624,28.3093689208279,73.8769701782318,47.1266948237853,79.5649865387461,63.3221442696396,54.4993206178733,58.1151053085267,74.3062617924429,74.3160629097654,78.6672861723768,100.855546835625,58.1289414818045,62.8073491884411,67.7803101279644,72.2151765365487,60.1245313887675,39.1422698558057,103.937182939099,170.280172639339,74.5934601209087,69.3729570889278,65.9893004092748,62.5185517199478,158.178915211493,147.315194107598,132.690995831185,160.787496177856,182.069405619195,159.373430177183,164.512640750706,74.5464143384315,68.4238338355512,54.5881158216737,65.6578590365799,54.910826930261,65.0622955546728,63.7419939510936,68.8721017509218,76.0648060511845,78.6618242548978,71.0259072162744,69.0737999873172,51.7363183038821,60.1357334933665,59.4714799674147,58.3060648257349,62.2825838265339,66.864415972256,70.1717085151087,60.9044856464589,71.6257451059499,52.2416251442872,55.127718882745,66.9016245289671,56.9898325754064,72.0248245844059,70.5499312043926,76.3445219179927,85.0011792009454,86.7351613919021,73.238638582096,103.337327994945,108.28038124307,93.5754545250843,98.0121907409396,111.550590405529,91.113297845786,105.888864401933,142.997165023607,108.564366060145,106.394848120783,74.3106092324559,51.1891801284562,61.7749547148766,55.9284782137885,64.9420949287163,54.4826207419932,56.4970109554301,64.0614233085091,77.0791108108371,69.8711880464749,67.6452004939913,75.2561376279804,61.1197197884871,73.9192130571454,76.6693902029314,28.4501851429623,57.1242563048644,50.7184810528862,57.22602312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|EntrezGene=18472
|HGNC=
|MCL_coexpression_id=1585
|UniProt=P63005,Q5SW18,Q3UHM0
|association_with_transcript=0bp_to_ENSMUST00000126341,NM_013625,uc007kcd.2,uc011xyy.1_5end
|description=CAGE_peak_1_at_Pafah1b1_5end
|id=chr11:74537834..74537895,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!8.98e-09!34;UBERON:0000073!2.73e-08!75;UBERON:0001016!2.73e-08!75;UBERON:0001049!5.36e-08!52;UBERON:0005068!5.36e-08!52;UBERON:0006241!5.36e-08!52;UBERON:0007135!5.36e-08!52;UBERON:0000955!9.96e-08!50;UBERON:0006238!9.96e-08!50;UBERON:0001017!1.05e-07!73;UBERON:0005743!1.05e-07!73;UBERON:0002616!2.35e-07!49;UBERON:0002021!3.59e-07!10;UBERON:0000411!3.59e-07!10;UBERON:0001950!3.59e-07!10;UBERON:0007811!3.99e-07!86;UBERON:0002791!5.17e-07!29;UBERON:0003528!5.17e-07!29;UBERON:0001893!5.17e-07!29;UBERON:0000483!5.62e-07!181;UBERON:0004121!7.71e-07!102;UBERON:0000924!7.71e-07!102;UBERON:0006601!7.71e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.22e-09,54;UBERON:0010314,5.52e-09,92;UBERON:0002020,8.98e-09,34;UBERON:0001016,2.73e-08,75;UBERON:0001049,5.36e-08,52;UBERON:0005068,5.36e-08,52;UBERON:0006241,5.36e-08,52;UBERON:0007135,5.36e-08,52;UBERON:0001017,1.05e-07,73;UBERON:0004121,2.26e-07,95;UBERON:0000924,2.26e-07,95;UBERON:0006601,2.26e-07,95;UBERON:0000483,2.97e-07,174;UBERON:0002021,3.59e-07,10;UBERON:0000411,3.59e-07,10;UBERON:0001950,3.59e-07,10;UBERON:0010371,5.00e-07,73;UBERON:0003528,5.17e-07,29;UBERON:0002791,5.17e-07,29;UBERON:0001893,5.17e-07,29;UBERON:0002346,6.14e-07,64;UBERON:0003075,6.14e-07,64;UBERON:0007284,6.14e-07,64
|phase1_expression=88.2420147547415,168.904097297451,175.174707164971,154.861676189097,185.832315810095,76.5529479918218,68.2148910538935,73.9876643320232,104.74680928084,117.968521266285,45.7151975162098,47.5442067612205,72.4179087609,82.6997006883715,65.6226230776856,66.4118877038629,84.6469872535057,75.0799953552606,76.2356250847908,76.8145269754435,76.2838312655096,56.0000964772993,49.3667601472588,65.7568857680901,66.2992822284121,130.924887818225,116.736500959109,98.0394108720795,75.8193443630932,99.0478409956528,67.4060752392126,22.8611042445467,15.9916844771988,0,45.9274075404527,36.2391526881513,45.1214277339836,173.690626755817,142.984368047855,168.051121815589,195.292854026297,190.569690303406,187.406996270025,61.3117503541061,65.1853667741479,64.0578165044269,26.6013057078333,40.1166287740022,31.8544964964984,54.8292315389479,40.4560758497298,25.8754615856949,102.682954907335,93.5717163194634,91.0814195676077,73.8334581423168,81.6620303825457,97.4620254404366,75.2617234397704,65.5948814297321,47.5373552629634,37.6117430596737,27.5681386794453,34.6461391153339,33.6214563272771,34.8135256323589,20.3728075152515,30.7374644257244,83.9885859698669,60.8876781875925,68.1452874778478,97.406985681697,85.6969938892261,79.86400108815,74.6636219232061,40.4456266108409,176.185409599022,216.046976040138,213.513081226178,73.3287759779878,88.1026007891205,90.1180131063195,145.454342479719,149.694854268427,168.994862041152,132.58286346315,150.629238285451,109.975673036927,107.531194533121,95.9003097755108,106.380267353516,68.8339101585109,80.9165887112223,63.1452734216246,49.3830077260229,47.0428231452202,62.9191002190248,44.6527445154511,46.5016948239135,42.4007489412408,78.449784815611,102.661181931454,109.566253073858,163.545341725266,36.1540038488728,31.9233430498624,28.3093689208279,73.8769701782318,47.1266948237853,79.5649865387461,63.3221442696396,54.4993206178733,58.1151053085267,74.3062617924429,74.3160629097654,78.6672861723768,100.855546835625,58.1289414818045,62.8073491884411,67.7803101279644,72.2151765365487,60.1245313887675,39.1422698558057,103.937182939099,170.280172639339,74.5934601209087,69.3729570889278,65.9893004092748,62.5185517199478,158.178915211493,147.315194107598,132.690995831185,160.787496177856,182.069405619195,159.373430177183,164.512640750706,74.5464143384315,68.4238338355512,54.5881158216737,65.6578590365799,54.910826930261,65.0622955546728,63.7419939510936,68.8721017509218,76.0648060511845,78.6618242548978,71.0259072162744,69.0737999873172,51.7363183038821,60.1357334933665,59.4714799674147,58.3060648257349,62.2825838265339,66.864415972256,70.1717085151087,60.9044856464589,71.6257451059499,52.2416251442872,55.127718882745,66.9016245289671,56.9898325754064,72.0248245844059,70.5499312043926,76.3445219179927,85.0011792009454,86.7351613919021,73.238638582096,103.337327994945,108.28038124307,93.5754545250843,98.0121907409396,111.550590405529,91.113297845786,105.888864401933,142.997165023607,108.564366060145,106.394848120783,74.3106092324559,51.1891801284562,61.7749547148766,55.9284782137885,64.9420949287163,54.4826207419932,56.4970109554301,64.0614233085091,77.0791108108371,69.8711880464749,67.6452004939913,75.2561376279804,61.1197197884871,73.9192130571454,76.6693902029314,28.4501851429623,57.1242563048644,50.7184810528862,57.2260231245333,55.8583163042762,64.5950901189834,62.920354438636,66.424566590821,67.3524542439498,68.6088231405211,53.6579255027739,55.8931104148915,51.6950157147724,56.2155280962134,64.7123787229324,54.2648609442938,64.6749663524806,54.9499622531048,65.5026316171143,49.1464929606666,287.536413054709,52.8440145689275,44.3093495822676,60.1137729514126,57.9453645675776,63.6825448199645,82.7694291946389,61.3952174136371,58.9933214720134,57.3738389920136,65.4785792724921,68.8450718085863,71.8891795475761,100.688962294624,74.8766934504407,78.8414295149639,91.3675824407401,81.931657357869,98.0850696998287,95.3237296052161,60.3165135757089,23.3879444042045,60.4870055813415,58.4985902166033,174.839592496705,179.099457112886,72.1313759657372,98.7161325369098,84.871711022973,69.107657740505,87.2464760817836,79.8155785161524,75.5287505139316,98.7937092453025,78.5332761249295,71.6026851882714,79.4528433672512,128.207205252301,63.3052780028878,59.295846021196,78.8372883271308,64.0084077133438,57.080409486184,46.6138821417564,47.1624748865012,41.6817226260535,43.4093782534736,60.8721592928976,63.5733601193824,63.254868929086,57.0395805415554,51.8300283014738,49.5467460302494,56.7245487865028,68.0879211507576,66.2624826035222,40.1011919726539,63.2294253343197,66.3252473822103,72.5961087640427,70.4269808177078,41.7116980287001,67.1161085062212,105.068707148455,80.0518084939512,96.1286854648829,83.800037455175,73.0389520879967,69.8328212418348,78.1310682786492,62.6683798754179,185.981577916541,54.1660692129193,54.4861331422907,50.0025223898222,48.4106934502056,46.7494258805906,66.116892056685,109.806065776031,100.62509422071,114.153178362454,47.7335309007557,58.8384948060912,62.8257153421962,56.1627772273367,60.8446941402104,55.6824537552753,61.7678706442479,66.0401111245434,73.2916637555283,69.9920855775681,59.0272347432579,38.3311198305249,66.8338960816585,61.2196414691261,62.2243802700953,62.5133545632219,64.0343715610049,66.5415543121425,72.9144555126121,75.1841499532347,51.2158336151133,48.6770710575793,82.4789024839545,54.9385333436345,54.9503620831826,59.7635785697857,64.4496104402933,78.8764978481622,73.319224207181,83.4445828536361,76.4316026107478,80.0171469877498,73.3006365944831,74.9451102888696,83.223243018885,89.5277070710818,82.3031292523217,72.5894067533192,76.4362058312733,87.9715389747771,65.8776515649769,64.7504540306578,63.0041587479392,58.3081991095059,76.2389598133752,181.285341480078,183.669769366364,169.004176464622,91.5977461891855,174.696042541514,163.165081836175,194.40648006676,193.187796183191,183.975818047587,195.195637530436,74.7268902606072,62.2478802505608,66.7568398498665,68.7992009303272,74.8318990581897,86.2226054630566,74.2304070857395,79.7355671514521,87.9318634281574,75.0510718938478,80.0994587653158,81.2979531373988,75.4750550207252,80.6076668777304,88.2783157847776,69.5388789273288,90.621542888877,94.5255180272155,81.5930083590547,90.9689326430575,75.7741047771768,80.3965401901799,79.6376874424052,69.7662799835177,83.9455673304749,75.0531571999171,76.4638926608189,73.659519202596,79.7170148275209,67.3370725989286,87.3153733393922,87.2749713847492,73.2523567273744,76.8486732282391,66.3598741775126,66.4496137314936,75.0920463109761,70.2628346737935,71.9244128578851,79.4129108830256,66.3142009874405
|short_description=p1@Pafah1b1
}}

Revision as of 20:51, 12 September 2013

Short description:p1@Pafah1b1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pafah1b1_5end
Coexpression cluster:MCL_coexpression_mm9:1585
Association with transcript: 0bp_to_ENSMUST00000126341, NM_013625, uc007kcd.2, uc011xyy.1_5end
EntrezGene:Pafah1b1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pafah1b1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G788.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5168.90
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6175.17
CD326+ enterocyte, pool1.CNhs13542.11848-124I3154.86
CD326+ enterocyte, pool2.CNhs13197.11849-124I4185.83
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I776.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I868.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E973.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7104.75
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2117.97
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E645.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F147.54
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E472.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E882.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A165.62
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A366.41
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A584.65
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A275.08
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A476.24
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A676.81
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A376.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H256.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I949.37
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D165.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D266.30
GP2+ M cell, pool1.CNhs13228.11845-124H9130.92
GP2+ M cell, pool2.CNhs13231.11846-124I1116.74
GP2+ M cell, pool3.CNhs13240.11847-124I298.04
Ileum epithelium, pool1.CNhs13199.10252-104B975.82
Ileum epithelium, pool2.CNhs13232.10253-104C199.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C867.41
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I322.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F545.93
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F636.24
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F745.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8173.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1142.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3168.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9195.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2190.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4187.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D861.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D965.19
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B364.06
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B726.60
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C240.12
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B831.85
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C354.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C440.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C425.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2102.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I993.57
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A191.08
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C173.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E181.66
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C597.46
Mouse Granule cells, donor1.CNhs12131.11713-123C375.26
Mouse Granule cells, donor2.CNhs12357.11731-123E365.59
Mouse Granule cells, donor3.CNhs12108.11636-122C747.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C637.61
Mouse Meningeal cells, donor3.CNhs12109.11639-122D127.57
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C734.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E733.62
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D234.81
Mouse Microglia, donor1.CNhs12629.11718-123C820.37
Mouse Microglia, donor2.CNhs12634.11736-123E830.74
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D583.99
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F560.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D968.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F197.41
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D585.70
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D279.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F274.66
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D640.45
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3176.19
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3216.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7213.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D473.33
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F488.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D890.12
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4145.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5149.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6168.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6132.58
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6150.63
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1109.98
Mouse Schwann, donor1.CNhs12507.11728-123D9107.53
Mouse Schwann, donor2.CNhs12573.11746-123F995.90
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3106.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F768.83
Mouse hepatocyte, donor1.CNhs13078.11714-123C480.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C863.15
Mouse hepatocyte, donor6.CNhs13090.11822-124F449.38
Mouse hepatocyte, donor8.CNhs13091.11824-124F647.04
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A762.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I744.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E346.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I842.40
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G678.45
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1102.66
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8109.57
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6163.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G136.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G231.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G328.31
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B673.88
accessory axillary lymph node, adult.CNhs10475.1063-29H947.13
adrenal gland, adult.CNhs10508.49-24D779.56
adrenal gland, embryo E14.CNhs11038.406-44C563.32
adrenal gland, embryo E16.CNhs11004.1254-43D654.50
adrenal gland, embryo E17.CNhs11043.1263-45I158.12
adrenal gland, embryo E18.CNhs11026.1262-18F574.31
adrenal gland, neonate N00.CNhs11191.1311-23C174.32
adrenal gland, neonate N25.CNhs11223.1377-27I378.67
amnion, adult pregnant day17.5.CNhs10488.583-22A8100.86
aorta, adult.CNhs10498.46-23H158.13
bone (os femoris), adult.CNhs10483.56-12G262.81
bone (os femoris), neonate N02.CNhs11227.1985-43F567.78
bone (os femoris), neonate N16.CNhs11225.1525-43A672.22
bone (os femoris), neonate N20.CNhs11195.1350-25C360.12
cecum, adult.CNhs10467.37-13H439.14
cerebellum, adult.CNhs10494.15-8B2103.94
cerebellum, neonate N30.CNhs11135.1395-42I2170.28
colon, adult.CNhs10468.36-18H774.59
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C769.37
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D165.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D462.52
corpora quadrigemina, adult.CNhs10501.16-22A4158.18
corpus striatum, adult.CNhs10487.19-21D8147.32
corpus striatum, neonate N00.CNhs11226.630-43F1132.69
cortex, adult.CNhs10473.12-14D5160.79
cortex, neonate N30.CNhs11107.1392-42F2182.07
diencephalon, adult.CNhs10482.20-12F2159.37
diencephalon, neonate N30.CNhs11201.1388-42B2164.51
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B174.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A268.42
epididymis, adult.CNhs10490.58-23B254.59
eyeball, adult.CNhs10484.31-12G465.66
eyeball, embryo E12.CNhs11016.345-16C654.91
eyeball, embryo E14.CNhs10521.399-16E265.06
eyeball, embryo E15.CNhs10593.426-16C963.74
eyeball, embryo E17.CNhs11023.1261-18D468.87
eyeball, neonate N00.CNhs11207.633-15C676.06
eyeball, neonate N01.CNhs11140.1532-43E778.66
eyeball, neonate N02.CNhs11205.1551-44G871.03
eyeball, neonate N16.CNhs11188.777-19A269.07
forelimb, embryo E11.CNhs10596.335-25E251.74
forelimb, embryo E12.CNhs10600.359-14H260.14
forelimb, embryo E13.CNhs10589.384-1E259.47
forelimb, embryo E14.CNhs10577.413-26A858.31
forelimb, embryo E15.CNhs11007.437-20E762.28
forelimb, embryo E17.CNhs10598.1517-43C466.86
forelimb, embryo E18.CNhs11008.1520-43B570.17
gonad, embryo E13.CNhs11044.1564-45I660.90
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C871.63
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D252.24
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D555.13
heart, embryo E11.CNhs10586.331-24E966.90
heart, embryo E12.CNhs11015.353-12F556.99
heart, embryo E13.CNhs11013.376-3I972.02
heart, embryo E14.CNhs10597.403-26D470.55
heart, embryo E15.CNhs11017.431-16C876.34
heart, embryo E16.CNhs11021.457-17C685.00
heart, embryo E17.CNhs11025.479-18E586.74
heart, embryo E18.CNhs11030.1283-20G373.24
heart, neonate N00.CNhs11213.639-21E3103.34
heart, neonate N03.CNhs11221.1349-25I2108.28
heart, neonate N10.CNhs11118.749-24G193.58
heart, neonate N16.CNhs11209.782-15G198.01
heart, neonate N20.CNhs11127.821-26I6111.55
heart, neonate N25.CNhs11196.1351-25D391.11
heart, neonate N30.CNhs11202.1390-42D2105.89
hippocampus, adult.CNhs10478.13-16E8143.00
hippocampus, neonate N00.CNhs11228.627-43G1108.56
intestinal mucosa, adult.CNhs10506.860-29I3106.39
intestine, adult.CNhs10496.178-9A374.31
intestine, embryo E12.CNhs11019.1251-16I551.19
intestine, embryo E13.CNhs11010.381-16D561.77
intestine, embryo E15.CNhs10602.976-16D855.93
intestine, embryo E16.CNhs10585.463-22H464.94
intestine, embryo E17.CNhs10582.482-18D354.48
intestine, embryo E18.CNhs10526.1289-20F756.50
intestine, neonate N00.CNhs11126.644-26D164.06
intestine, neonate N01.CNhs11192.1322-23E977.08
intestine, neonate N06.CNhs11102.688-20B869.87
intestine, neonate N07.CNhs11095.720-20F267.65
intestine, neonate N10.CNhs11098.755-23A575.26
intestine, neonate N20.CNhs11187.827-18D161.12
intestine, neonate N25.CNhs11121.1352-25E373.92
intestine, neonate N30.CNhs11131.1384-42G176.67
kidney, embryo E14.CNhs10606.411-4I928.45
kidney, embryo E15.CNhs10997.434-16F857.12
kidney, embryo E16.CNhs10584.464-22A550.72
kidney, embryo E17.CNhs11028.483-18I257.23
kidney, embryo E18.CNhs11001.1288-20C755.86
kidney, neonate N00.CNhs11214.646-21G764.60
kidney, neonate N10.CNhs11206.758-6D562.92
kidney, neonate N20.CNhs11113.832-19I166.42
kidney, neonate N25.CNhs11122.1353-25F367.35
kidney, neonate N30.CNhs11203.1385-42H168.61
liver, adult pregnant day01.CNhs10466.508-5B253.66
liver, embryo E12.CNhs10601.355-15F855.89
liver, embryo E13.CNhs10524.378-3H651.70
liver, embryo E14.CNhs10594.409-16E156.22
liver, embryo E15.CNhs10520.433-16D764.71
liver, embryo E16.CNhs10523.462-17F554.26
liver, embryo E17.CNhs10510.481-18A364.67
liver, embryo E18.CNhs10579.499-43G454.95
liver, neonate N00.CNhs11117.641-24F465.50
liver, neonate N03.CNhs11123.1345-25G249.15
liver, neonate N06.CNhs11101.684-20A8287.54
liver, neonate N07.CNhs11103.716-20H252.84
liver, neonate N10.CNhs11115.751-24B944.31
liver, neonate N20.CNhs11220.823-25A360.11
liver, neonate N25.CNhs11198.1368-26H157.95
liver, neonate N30.CNhs11106.1382-42D163.68
lung, adult.CNhs10474.28-22B182.77
lung, embryo E12.CNhs10522.354-16G261.40
lung, embryo E14.CNhs10604.404-26F858.99
lung, embryo E15.CNhs11020.432-17C557.37
lung, embryo E16.CNhs10998.458-17B665.48
lung, embryo E17.CNhs10605.480-44A668.85
lung, embryo E18.CNhs10583.1287-20I671.89
lung, neonate N00.CNhs11224.640-42C6100.69
lung, neonate N06.CNhs11212.683-20E574.88
lung, neonate N07.CNhs11111.715-19A378.84
lung, neonate N10.CNhs11219.750-23E691.37
lung, neonate N20.CNhs11109.822-18A481.93
lung, neonate N25.CNhs11119.1359-25C798.09
lung, neonate N30.CNhs11133.1394-42H295.32
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A160.32
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.39
mammary gland, adult lactating day02.CNhs10480.595-22B660.49
mammary gland, adult pregnant day19.CNhs10476.588-5H258.50
medulla oblongata, adult.CNhs10477.17-12C2174.84
medulla oblongata, neonate N30.CNhs11200.1396-42A3179.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C772.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C298.72
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E184.87
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E269.11
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E387.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D779.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D875.53
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D998.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D478.53
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D571.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D679.45
olfactory brain, adult.CNhs10489.18-22I9128.21
ovary, adult.CNhs10507.91-2I763.31
ovary, embryo E18.CNhs11040.505-44H759.30
ovary, neonate N00.CNhs11217.1299-22I478.84
oviduct, adult pregnant day01.CNhs10500.988-6G664.01
pancreas, adult.CNhs10486.34-16E457.08
pancreas, embryo E14.CNhs11012.405-44F446.61
pancreas, embryo E15.CNhs11042.1556-45F247.16
pancreas, embryo E16.CNhs11003.460-26E541.68
pancreas, embryo E17.CNhs10599.1558-45G343.41
pancreas, embryo E18.CNhs10580.1535-43I760.87
pancreas, neonate N00.CNhs11105.645-26G963.57
pancreas, neonate N01.CNhs11138.1531-43D763.25
pancreas, neonate N02.CNhs11139.1539-43D857.04
pancreas, neonate N16.CNhs11136.787-43B651.83
pancreas, neonate N25.CNhs11094.1555-45E249.55
pancreas, neonate N30.CNhs11182.1548-44H556.72
pituitary gland, adult.CNhs10493.21-1G868.09
pituitary gland, embryo E12.CNhs11018.346-16E666.26
pituitary gland, embryo E13.CNhs11009.370-44C740.10
pituitary gland, embryo E14.CNhs11037.398-44A563.23
pituitary gland, embryo E15.CNhs10592.427-16B966.33
pituitary gland, embryo E16.CNhs11036.449-43F672.60
pituitary gland, embryo E17.CNhs11039.1265-44F570.43
pituitary gland, neonate N00.CNhs11190.1308-22E941.71
placenta, adult pregnant day10.CNhs10472.539-13I767.12
placenta, adult pregnant day17.CNhs10464.577-18G3105.07
prostate, adult.CNhs10470.859-1F880.05
skin, adult.CNhs10492.30-1C396.13
skin, neonate N00.CNhs11124.650-25G483.80
skin, neonate N03.CNhs11215.662-22H373.04
skin, neonate N06.CNhs11097.693-20I569.83
skin, neonate N10.CNhs11108.762-6C478.13
small intestine, neonate N16.CNhs11114.790-21I162.67
spinal cord, adult.CNhs10505.24-13C9185.98
spleen, adult.CNhs10465.25-2G254.17
spleen, embryo E16.CNhs11035.461-43C154.49
spleen, embryo E18.CNhs11011.1271-21F250.00
spleen, neonate N10.CNhs11116.752-24D148.41
spleen, neonate N20.CNhs11112.824-19H146.75
spleen, neonate N25.CNhs11099.1354-25G366.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6109.81
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9100.63
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3114.15
stomach, adult.CNhs10503.33-1H647.73
stomach, embryo E12.CNhs10588.356-43E358.84
stomach, embryo E15.CNhs10603.1252-16G862.83
stomach, embryo E16.CNhs11022.459-17D456.16
stomach, embryo E17.CNhs11006.1035-18D560.84
stomach, embryo E18.CNhs10999.1286-20C655.68
stomach, neonate N03.CNhs11193.1340-24B861.77
stomach, neonate N07.CNhs11210.718-18A966.04
stomach, neonate N25.CNhs11104.1355-25E473.29
stomach, neonate N30.CNhs11134.1386-42I169.99
submandibular gland, adult.CNhs10469.59-29C159.03
testis, adult.CNhs10504.57-7G538.33
testis, embryo E13.CNhs11031.389-23F566.83
testis, embryo E15.CNhs11034.443-27C561.22
testis, embryo E16.CNhs11033.470-26G562.22
testis, embryo E17.CNhs11029.486-18I562.51
testis, embryo E18.CNhs11027.503-18G564.03
testis, neonate N00.CNhs11189.1300-22B766.54
testis, neonate N07.CNhs11222.726-26I472.91
testis, neonate N10.CNhs11204.763-44D975.18
testis, neonate N20.CNhs11110.839-18H351.22
testis, neonate N30.CNhs11130.1391-42E248.68
thymus, adult.CNhs10471.38-12B582.48
thymus, embryo E14.CNhs11041.402-44I454.94
thymus, embryo E15.CNhs11005.430-45I254.95
thymus, embryo E16.CNhs11002.456-26C559.76
thymus, embryo E17.CNhs10581.478-18C164.45
thymus, embryo E18.CNhs10595.1273-19G478.88
thymus, neonate N02.CNhs11181.1541-43F873.32
thymus, neonate N03.CNhs11137.2104-43C783.44
thymus, neonate N06.CNhs11197.681-26C476.43
thymus, neonate N07.CNhs11211.713-19D380.02
thymus, neonate N10.CNhs11194.748-24E473.30
thymus, neonate N20.CNhs11186.820-7A274.95
thymus, neonate N25.CNhs11125.1362-25G783.22
thymus, neonate N30.CNhs11132.1393-42G289.53
tongue, adult.CNhs10499.32-1B482.30
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H372.59
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F776.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G587.97
urinary bladder, adult.CNhs10481.879-12E465.88
uterus, adult pregnant day19.CNhs10497.590-15F564.75
uterus, adult.CNhs10509.92-27E563.00
vagina, adult.CNhs10502.89-27D558.31
vesicular gland, adult.CNhs10491.51-27F876.24
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1181.29
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2183.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3169.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D791.60
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4174.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5163.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6194.41
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7193.19
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8183.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9195.20
whole body, embryo E11.CNhs11014.324-5I874.73
whole body, embryo E12.CNhs10587.857-27C962.25
whole body, embryo E13.CNhs10512.372-23H266.76
whole body, embryo E14.5.CNhs10578.420-27D268.80
whole body, embryo E14.CNhs10519.395-14B174.83
whole body, embryo E16.CNhs10514.453-14F286.22
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G574.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G579.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G587.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G575.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G580.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G581.30
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G575.48
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G580.61
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G588.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G569.54
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G590.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G594.53
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G581.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G590.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G575.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G580.40
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G579.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G569.77
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G583.95
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G575.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G576.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G573.66
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G579.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G567.34
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G587.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G587.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G573.25
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G576.85
whole body, embryo E17.5.CNhs10513.490-9F966.36
whole body, embryo E17.CNhs10517.475-3I566.45
whole body, embryo E18.CNhs10516.493-3B375.09
whole body, neonate N00.CNhs10525.657-19C270.26
whole body, neonate N01.CNhs10576.659-23C671.92
whole body, neonate N06.CNhs10515.692-21D179.41
whole body, neonate N10.CNhs10518.761-6B466.31





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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