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FFCP PHASE1:Mm9::chr11:75281542..75281598,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=380712|HGNC=|MCL_coexpression_id=606|UniProt=Q8VC26|association_with_transcript=0bp_to_ENSMUST00000043598,ENSMUST00000108435,NM_027249,uc007kdw.1,uc011xzl.1_5end|description=CAGE_peak_1_at_Tlcd2_5end|id=chr11:75281542..75281598,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!7.52e-13!22;UBERON:0007499!7.52e-13!22;UBERON:0006925!7.52e-13!22;UBERON:0009497!7.52e-13!22;UBERON:0000015!7.52e-13!22;UBERON:0002423!7.52e-13!22;UBERON:0006235!7.52e-13!22;UBERON:0008835!7.52e-13!22;UBERON:0003894!7.52e-13!22;UBERON:0004161!7.52e-13!22;UBERON:0008836!7.52e-13!22;UBERON:0009854!2.11e-11!23;UBERON:0009856!2.11e-11!23;UBERON:0002365!9.06e-11!25;UBERON:0002330!9.06e-11!25;UBERON:0003914!3.19e-10!47;UBERON:0001007!3.03e-09!128;UBERON:0001555!3.03e-09!128;UBERON:0007026!3.03e-09!128;UBERON:0005256!5.51e-09!47;UBERON:0004119!1.08e-08!130;UBERON:0000925!1.08e-08!130;UBERON:0006595!1.08e-08!130;UBERON:0005172!1.54e-08!49;UBERON:0005173!1.54e-08!49;UBERON:0002417!1.54e-08!49;UBERON:0000916!1.54e-08!49;UBERON:0004921!1.95e-08!126;UBERON:0004185!1.95e-08!126;UBERON:0000466!9.37e-08!79;UBERON:0005409!9.62e-08!59;UBERON:0000160!4.52e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.20e-13,22;UBERON:0007499,5.20e-13,22;UBERON:0006925,5.20e-13,22;UBERON:0009497,5.20e-13,22;UBERON:0000015,5.20e-13,22;UBERON:0002423,5.20e-13,22;UBERON:0006235,5.20e-13,22;UBERON:0008835,5.20e-13,22;UBERON:0003894,5.20e-13,22;UBERON:0004161,5.20e-13,22;UBERON:0008836,5.20e-13,22;UBERON:0009854,1.07e-11,23;UBERON:0009856,1.07e-11,23;UBERON:0002365,7.39e-11,25;UBERON:0002330,7.39e-11,25;UBERON:0003914,3.61e-10,47;UBERON:0005256,2.33e-09,45;UBERON:0001007,2.58e-09,116;UBERON:0001555,2.58e-09,116;UBERON:0007026,2.58e-09,116;UBERON:0005172,1.23e-08,49;UBERON:0005173,1.23e-08,49;UBERON:0002417,1.23e-08,49;UBERON:0000916,1.23e-08,49;UBERON:0004119,1.65e-08,118;UBERON:0000925,1.65e-08,118;UBERON:0006595,1.65e-08,118;UBERON:0004921,1.73e-08,114;UBERON:0005409,2.94e-08,47;UBERON:0000160,5.57e-08,31;UBERON:0003104,8.03e-08,61;UBERON:0009142,8.03e-08,61|phase1_expression=3.20297694209588,98.7600403619392,85.9948562446223,53.2337011900021,51.5922601844738,7.55456723603504,8.1764424208434,3.48632973292256,0,0.234064526321993,0.171217968225505,0.239316476986009,0,1.31130603628496,2.33176833270964,3.03712901084739,2.09868563438444,1.10411757875383,0.685572168028694,2.97072756258621,1.10556277196391,0,0,54.8774010181385,50.2406325537102,51.1066448062368,40.9223896351121,33.8289835316846,26.2232318849796,25.455043105753,23.0599731081517,0.635030673459631,1.84519436275371,0,0.288851619751275,2.1610503896604,1.22501613757421,0,1.5626706890476,0,0,0.683045484958446,0,4.40638862914521,3.34543873024398,4.9557623083654,3.12956537739216,3.2703773457067,3.95435128922049,0.777719596297134,6.29938897314131,4.31257693094915,0.838913030288682,0,0,7.20326420900652,14.6132054368766,12.8918023069361,0.606949382578793,0.528990979272033,0.633831403506179,2.71075625655306,1.77858959222228,1.7997994345628,1.97773272513395,2.1314403448383,1.49800055259202,0.384218305321555,0,0.270011876663381,0.210324961351382,0.285650984403804,0.662605622854841,0.122490799214954,0.0958454710182364,0,1.10115880999389,0.127687338085188,0,0,0.457438218012048,0,0.558365998002762,0.56276261003168,0,0.589257170947335,0.996601765593721,0.372798891650601,0.227178579999552,3.47629176491213,10.7249860819621,122.180190531357,38.078394687634,153.815409616778,124.757072149952,105.734345354971,31.7404389497759,1.53387290320252,1.29893002301434,0.35333957451034,3.09855523508697,0,0,0,3.030874574157,3.29367825117628,1.51657333504435,31.7431185618987,0.517875767294343,4.89859058913922,5.03107447621794,3.95805121805784,2.30615497256059,3.3158980921577,2.82212897125692,11.3099932196708,1.73036477414062,4.77177877835708,0.884610551949874,2.91180329905337,5.96272099843063,4.84875253135222,0,0,0.209446706813455,18.6483650302272,4.43315960671905,3.59941638596045,3.81210681219194,0.449371918214468,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,4.3790926455636,2.11491850037158,1.76905930903572,424.250781467132,2.73252930221678,2.98872735763515,3.78130472591233,3.0140963567143,2.04109497453984,1.66547836370305,1.12442069471675,99.600797734521,1.29340795759705,1.51284864134255,3.87092473160687,3.5071317188412,4.17070873838397,6.268538997399,4.11564272815887,2.9855140022774,4.91549231119264,4.37491442095016,3.6941254921427,3.10688658803253,1.40715635988658,2.52086886045421,2.3674473558521,1.18058539048442,0.925602677324269,1.16266972375204,1.60964040839772,1.86824547787471,2.30383789878873,3.94001913789829,5.75588547775576,5.4093995347373,8.12335426576887,5.09984391289413,0,0,48.2411423156345,81.4507745323716,2.34617075588757,1.62565670302307,3.8660238396628,2.8235693447268,2.89091456998331,5.89699440948933,30.3698599388487,14.3288090609889,19.1014758688205,22.28312486860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|EntrezGene=380712
|HGNC=
|MCL_coexpression_id=606
|UniProt=Q8VC26
|association_with_transcript=0bp_to_ENSMUST00000043598,ENSMUST00000108435,NM_027249,uc007kdw.1,uc011xzl.1_5end
|description=CAGE_peak_1_at_Tlcd2_5end
|id=chr11:75281542..75281598,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!7.52e-13!22;UBERON:0007499!7.52e-13!22;UBERON:0006925!7.52e-13!22;UBERON:0009497!7.52e-13!22;UBERON:0000015!7.52e-13!22;UBERON:0002423!7.52e-13!22;UBERON:0006235!7.52e-13!22;UBERON:0008835!7.52e-13!22;UBERON:0003894!7.52e-13!22;UBERON:0004161!7.52e-13!22;UBERON:0008836!7.52e-13!22;UBERON:0009854!2.11e-11!23;UBERON:0009856!2.11e-11!23;UBERON:0002365!9.06e-11!25;UBERON:0002330!9.06e-11!25;UBERON:0003914!3.19e-10!47;UBERON:0001007!3.03e-09!128;UBERON:0001555!3.03e-09!128;UBERON:0007026!3.03e-09!128;UBERON:0005256!5.51e-09!47;UBERON:0004119!1.08e-08!130;UBERON:0000925!1.08e-08!130;UBERON:0006595!1.08e-08!130;UBERON:0005172!1.54e-08!49;UBERON:0005173!1.54e-08!49;UBERON:0002417!1.54e-08!49;UBERON:0000916!1.54e-08!49;UBERON:0004921!1.95e-08!126;UBERON:0004185!1.95e-08!126;UBERON:0000466!9.37e-08!79;UBERON:0005409!9.62e-08!59;UBERON:0000160!4.52e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.20e-13,22;UBERON:0007499,5.20e-13,22;UBERON:0006925,5.20e-13,22;UBERON:0009497,5.20e-13,22;UBERON:0000015,5.20e-13,22;UBERON:0002423,5.20e-13,22;UBERON:0006235,5.20e-13,22;UBERON:0008835,5.20e-13,22;UBERON:0003894,5.20e-13,22;UBERON:0004161,5.20e-13,22;UBERON:0008836,5.20e-13,22;UBERON:0009854,1.07e-11,23;UBERON:0009856,1.07e-11,23;UBERON:0002365,7.39e-11,25;UBERON:0002330,7.39e-11,25;UBERON:0003914,3.61e-10,47;UBERON:0005256,2.33e-09,45;UBERON:0001007,2.58e-09,116;UBERON:0001555,2.58e-09,116;UBERON:0007026,2.58e-09,116;UBERON:0005172,1.23e-08,49;UBERON:0005173,1.23e-08,49;UBERON:0002417,1.23e-08,49;UBERON:0000916,1.23e-08,49;UBERON:0004119,1.65e-08,118;UBERON:0000925,1.65e-08,118;UBERON:0006595,1.65e-08,118;UBERON:0004921,1.73e-08,114;UBERON:0005409,2.94e-08,47;UBERON:0000160,5.57e-08,31;UBERON:0003104,8.03e-08,61;UBERON:0009142,8.03e-08,61
|phase1_expression=3.20297694209588,98.7600403619392,85.9948562446223,53.2337011900021,51.5922601844738,7.55456723603504,8.1764424208434,3.48632973292256,0,0.234064526321993,0.171217968225505,0.239316476986009,0,1.31130603628496,2.33176833270964,3.03712901084739,2.09868563438444,1.10411757875383,0.685572168028694,2.97072756258621,1.10556277196391,0,0,54.8774010181385,50.2406325537102,51.1066448062368,40.9223896351121,33.8289835316846,26.2232318849796,25.455043105753,23.0599731081517,0.635030673459631,1.84519436275371,0,0.288851619751275,2.1610503896604,1.22501613757421,0,1.5626706890476,0,0,0.683045484958446,0,4.40638862914521,3.34543873024398,4.9557623083654,3.12956537739216,3.2703773457067,3.95435128922049,0.777719596297134,6.29938897314131,4.31257693094915,0.838913030288682,0,0,7.20326420900652,14.6132054368766,12.8918023069361,0.606949382578793,0.528990979272033,0.633831403506179,2.71075625655306,1.77858959222228,1.7997994345628,1.97773272513395,2.1314403448383,1.49800055259202,0.384218305321555,0,0.270011876663381,0.210324961351382,0.285650984403804,0.662605622854841,0.122490799214954,0.0958454710182364,0,1.10115880999389,0.127687338085188,0,0,0.457438218012048,0,0.558365998002762,0.56276261003168,0,0.589257170947335,0.996601765593721,0.372798891650601,0.227178579999552,3.47629176491213,10.7249860819621,122.180190531357,38.078394687634,153.815409616778,124.757072149952,105.734345354971,31.7404389497759,1.53387290320252,1.29893002301434,0.35333957451034,3.09855523508697,0,0,0,3.030874574157,3.29367825117628,1.51657333504435,31.7431185618987,0.517875767294343,4.89859058913922,5.03107447621794,3.95805121805784,2.30615497256059,3.3158980921577,2.82212897125692,11.3099932196708,1.73036477414062,4.77177877835708,0.884610551949874,2.91180329905337,5.96272099843063,4.84875253135222,0,0,0.209446706813455,18.6483650302272,4.43315960671905,3.59941638596045,3.81210681219194,0.449371918214468,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,4.3790926455636,2.11491850037158,1.76905930903572,424.250781467132,2.73252930221678,2.98872735763515,3.78130472591233,3.0140963567143,2.04109497453984,1.66547836370305,1.12442069471675,99.600797734521,1.29340795759705,1.51284864134255,3.87092473160687,3.5071317188412,4.17070873838397,6.268538997399,4.11564272815887,2.9855140022774,4.91549231119264,4.37491442095016,3.6941254921427,3.10688658803253,1.40715635988658,2.52086886045421,2.3674473558521,1.18058539048442,0.925602677324269,1.16266972375204,1.60964040839772,1.86824547787471,2.30383789878873,3.94001913789829,5.75588547775576,5.4093995347373,8.12335426576887,5.09984391289413,0,0,48.2411423156345,81.4507745323716,2.34617075588757,1.62565670302307,3.8660238396628,2.8235693447268,2.89091456998331,5.89699440948933,30.3698599388487,14.3288090609889,19.1014758688205,22.2831248686089,18.1316601020782,32.357498711552,29.3947747829584,14.1390304010601,3.22435431620239,3.65595240351132,2.25415471346161,2.44381593414377,2.32742984601151,2.17421041659988,2.02356918797623,1.91893192373483,3.45397201251025,1.97435462274881,58.9940727903426,5.17219827719892,8.25547779475453,7.19558759631532,8.31726497692862,11.576503668116,10.6942857748196,16.686375972147,7.62035565842666,21.1412288154823,31.629005436018,24.9334434937897,63.0316099691412,142.707066040118,192.31402729549,67.5420929908714,1.66277871149944,3.97931964718018,4.4000543639347,1.35796068620151,2.11221223459652,1.34005005953453,2.38043640886014,0.390267295715598,2.20689201748667,2.6575762757853,1.91345722388985,2.62181303545181,4.83517949224508,1.44649058581512,3.01582567878545,1.63171705145613,1.96705709207614,0.275936746304732,0.321101179975584,0.234423373184406,0,5.80683132570058,0,0,0,0.716906393857656,0.668396022247182,0,0.404810701674894,0.292255857911312,0,0,5.39372323791421,8.369083372361,3.90928702448583,3.13443233647817,2.65490276679926,3.39892890616974,3.02323556964751,1.88605079755898,2.95301892880773,3.68922177532713,5.16856586336442,2.90826983582004,1.78248689192361,3.79244109522979,4.21674434299995,2.06271086496374,1.02131881726136,2.70091641046965,2.8458910432206,2.57204442037911,8.6896714484714,5.35106452806212,4.27827453565514,3.04464949114599,0.938686832254841,0.847328283455281,2.20528398054962,10.3878339353132,7.26589920131575,7.84068024066026,7.40108532819446,6.56563598980245,22.7355052571284,0.556275906031529,2.22132145037209,3.30218988741156,2.77791791054568,3.76736914009382,4.23752105935178,2.97411625168479,4.07948231985253,6.85762116385924,4.00779924032829,5.72802370809068,4.11236791655476,5.28630614529807,3.24016022465404,2.71814784818809,4.36725127492355,1.88810084938749,4.95920734352016,1.57053565190418,5.18459893167171,3.10669656543463,0.56369293868419,3.58839710505549,5.29467169462712,4.66682852025714,5.68303223302017,6.42033276864957,4.22486059124714,4.03633593016245,2.72634295506848,2.89900944991207,1.44015003128933,2.21207784439725,5.27085559754427,5.13554785824136,4.02754551231165,3.40150721768215,3.17890167650024,1.44234539423963,1.77227432609493,2.82706059854813,1.67654974641,0.705783295957884,1.26695244961678,2.5977197242889,1.05189211963412,1.58711268530648,0,0,0,1.73870634628971,2.25218970541418,2.93042598827624,1.2862102744744,1.00314420807073,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,0,0.906284817968409,0.51776031175182,0.518936737920883,4.38927360741134,3.41467211508268,3.40349403895612,1.88651846365184,2.5738091183002,3.55594764482584,2.47242068686673,1.60459604795908,5.05394423527595,4.81610669791456,3.77252682772152,3.7456602987953,2.88113185821912,2.41228969613576,3.33405583898152,3.1288768005111,2.50781986602817,2.88460130562315,2.50238164228475,3.42869252385415,1.77475806159337,2.86123427936785,2.76158191601424,4.42314087952054,3.80765735512544,3.29270351170991,1.57841826862706,2.58027816307137,2.80571135828869,3.2031454893527,3.54616136552028,3.27384834535751,3.25367366490529,2.89359916471712,1.74867404556562,4.67863216890817,4.72716318906256,2.10417165275728,3.52946270591225,4.40548887678801
|short_description=p1@Tlcd2
}}

Revision as of 20:53, 12 September 2013

Short description:p1@Tlcd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tlcd2_5end
Coexpression cluster:MCL_coexpression_mm9:606
Association with transcript: 0bp_to_ENSMUST00000043598, ENSMUST00000108435, NM_027249, uc007kdw.1, uc011xzl.1_5end
EntrezGene:Tlcd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tlcd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I598.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I685.99
CD326+ enterocyte, pool1.CNhs13542.11848-124I353.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I451.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.18
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.97
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D154.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D250.24
GP2+ M cell, pool1.CNhs13228.11845-124H951.11
GP2+ M cell, pool2.CNhs13231.11846-124I140.92
GP2+ M cell, pool3.CNhs13240.11847-124I233.83
Ileum epithelium, pool1.CNhs13199.10252-104B926.22
Ileum epithelium, pool2.CNhs13232.10253-104C125.46
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C823.06
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.27
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.95
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.30
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.20
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.89
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F93.48
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.72
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7122.18
Mouse hepatocyte, donor1.CNhs13078.11714-123C438.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C8153.82
Mouse hepatocyte, donor6.CNhs13090.11822-124F4124.76
Mouse hepatocyte, donor8.CNhs13091.11824-124F6105.73
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A731.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B631.74
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C12.82
adrenal gland, neonate N25.CNhs11223.1377-27I311.31
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H14.77
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A65.96
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H718.65
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.43
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.81
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.38
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G4424.25
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A299.60
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A83.51
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.37
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G13.94
heart, neonate N16.CNhs11209.782-15G15.76
heart, neonate N20.CNhs11127.821-26I65.41
heart, neonate N25.CNhs11196.1351-25D38.12
heart, neonate N30.CNhs11202.1390-42D25.10
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I348.24
intestine, adult.CNhs10496.178-9A381.45
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D83.87
intestine, embryo E16.CNhs10585.463-22H42.82
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F75.90
intestine, neonate N00.CNhs11126.644-26D130.37
intestine, neonate N01.CNhs11192.1322-23E914.33
intestine, neonate N06.CNhs11102.688-20B819.10
intestine, neonate N07.CNhs11095.720-20F222.28
intestine, neonate N10.CNhs11098.755-23A518.13
intestine, neonate N20.CNhs11187.827-18D132.36
intestine, neonate N25.CNhs11121.1352-25E329.39
intestine, neonate N30.CNhs11131.1384-42G114.14
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F83.66
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B258.99
liver, embryo E12.CNhs10601.355-15F85.17
liver, embryo E13.CNhs10524.378-3H68.26
liver, embryo E14.CNhs10594.409-16E17.20
liver, embryo E15.CNhs10520.433-16D78.32
liver, embryo E16.CNhs10523.462-17F511.58
liver, embryo E17.CNhs10510.481-18A310.69
liver, embryo E18.CNhs10579.499-43G416.69
liver, neonate N00.CNhs11117.641-24F47.62
liver, neonate N03.CNhs11123.1345-25G221.14
liver, neonate N06.CNhs11101.684-20A831.63
liver, neonate N07.CNhs11103.716-20H224.93
liver, neonate N10.CNhs11115.751-24B963.03
liver, neonate N20.CNhs11220.823-25A3142.71
liver, neonate N25.CNhs11198.1368-26H1192.31
liver, neonate N30.CNhs11106.1382-42D167.54
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C74.84
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I75.39
ovary, embryo E18.CNhs11040.505-44H78.37
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E51.89
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B98.69
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C310.39
skin, neonate N00.CNhs11124.650-25G47.27
skin, neonate N03.CNhs11215.662-22H37.84
skin, neonate N06.CNhs11097.693-20I57.40
skin, neonate N10.CNhs11108.762-6C46.57
small intestine, neonate N16.CNhs11114.790-21I122.74
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C13.30
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H14.24
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.01
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A94.96
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I15.18
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.59
testis, embryo E15.CNhs11034.443-27C55.29
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I55.68
testis, embryo E18.CNhs11027.503-18G56.42
testis, neonate N00.CNhs11189.1300-22B74.22
testis, neonate N07.CNhs11222.726-26I44.04
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I45.27
thymus, embryo E15.CNhs11005.430-45I25.14
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C13.40
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C42.83
thymus, neonate N07.CNhs11211.713-19D31.68
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G72.60
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.41
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver5.20e-1322
epithelial sac5.20e-1322
digestive gland5.20e-1322
epithelium of foregut-midgut junction5.20e-1322
anatomical boundary5.20e-1322
hepatobiliary system5.20e-1322
foregut-midgut junction5.20e-1322
hepatic diverticulum5.20e-1322
liver primordium5.20e-1322
septum transversum5.20e-1322
liver bud5.20e-1322
digestive tract diverticulum1.07e-1123
sac1.07e-1123
exocrine gland7.39e-1125
exocrine system7.39e-1125
epithelial tube3.61e-1047
trunk mesenchyme2.33e-0945
digestive system2.58e-09116
digestive tract2.58e-09116
primitive gut2.58e-09116
abdomen element1.23e-0849
abdominal segment element1.23e-0849
abdominal segment of trunk1.23e-0849
abdomen1.23e-0849
endoderm-derived structure1.65e-08118
endoderm1.65e-08118
presumptive endoderm1.65e-08118
subdivision of digestive tract1.73e-08114
gastrointestinal system2.94e-0847
intestine5.57e-0831
mesenchyme8.03e-0861
entire embryonic mesenchyme8.03e-0861







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