FFCP PHASE1:Mm9::chr11:95703597..95703621,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14710|HGNC=|MCL_coexpression_id=1599|UniProt=Q61017,A2A614|association_with_transcript=0bp_to_ENSMUST00000107714,NM_023121,uc007lau.1_5end|description=CAGE_peak_1_at_Gngt2_5end|id=chr11:95703597..95703621,+|ontology_enrichment_celltype=CL:0000988!1.72e-07!32;CL:0002032!1.72e-07!32;CL:0000037!1.72e-07!32;CL:0000566!1.72e-07!32;CL:0000837!1.72e-07!32;CL:0002031!2.20e-07!25;CL:0002320!9.40e-07!46;CL:0000134!9.40e-07!46|ontology_enrichment_celltype_v019_2=CL:0002031,3.37e-10,25;CL:0002320,6.61e-10,46;CL:0000134,6.61e-10,46;CL:0000988,2.51e-09,32;CL:0002032,2.51e-09,32;CL:0000037,2.51e-09,32;CL:0000837,2.51e-09,32;CL:0000738,6.90e-08,17;CL:0002087,6.90e-08,17;CL:0000219,2.45e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.62e-17!48;UBERON:0002405!1.59e-16!70;UBERON:0002390!1.48e-15!45;UBERON:0003061!1.48e-15!45;UBERON:0003081!3.39e-11!88;UBERON:0004177!1.54e-08!29;UBERON:0005057!2.72e-08!51;UBERON:0000926!2.98e-08!193;UBERON:0004120!2.98e-08!193;UBERON:0006603!2.98e-08!193;UBERON:0002371!3.59e-08!16;UBERON:0001474!7.79e-07!22;UBERON:0004765!7.79e-07!22;UBERON:0001434!7.79e-07!22;UBERON:0001041!8.14e-07!92;UBERON:0002384!9.40e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.61e-22,48;UBERON:0002405,7.61e-22,48;UBERON:0002390,1.24e-19,45;UBERON:0003061,1.24e-19,45;UBERON:0003081,1.31e-12,87;UBERON:0004177,1.17e-11,29;UBERON:0005057,1.17e-11,29;UBERON:0000077,1.89e-10,35;UBERON:0002384,6.61e-10,46;UBERON:0003408,4.78e-09,24;UBERON:0002371,8.64e-09,16;UBERON:0002370,1.10e-08,23;UBERON:0000974,1.10e-08,23;UBERON:0004807,1.10e-08,23;UBERON:0005058,1.10e-08,23;UBERON:0003351,1.10e-08,23;UBERON:0009113,1.10e-08,23;UBERON:0003295,1.10e-08,23;UBERON:0009722,1.10e-08,23;UBERON:0005562,1.10e-08,23;UBERON:0007690,1.10e-08,23;UBERON:0006562,5.22e-08,24;UBERON:0001557,5.22e-08,24;UBERON:0001042,5.22e-08,24;UBERON:0008814,5.22e-08,24;UBERON:0009145,5.22e-08,24;UBERON:0001474,1.34e-07,22;UBERON:0004765,1.34e-07,22;UBERON:0001434,1.34e-07,22;UBERON:0001041,2.23e-07,80;UBERON:0001004,4.45e-07,42;UBERON:0000926,6.51e-07,120;UBERON:0004120,6.51e-07,120;UBERON:0006603,6.51e-07,120;UBERON:0000065,9.26e-07,41|phase1_expression=0,0.348975407639361,0,0,0,0,0,9.42600261123507,3.37892933164,3.27690336850791,0.34243593645101,0.239316476986009,8.38883576662908,5.76974655965383,7.32841475994458,5.87178275430495,3.49780939064073,25.5524353940173,25.5032846506674,31.8292238848523,1.44573593256819,14.0000241193248,15.9331871374751,11.3594620183319,7.34109699414944,0,0,0,0.760093677825496,3.02436155711917,1.33038306393183,0,0,0,0,0,0,3.76678467663217,8.5946887897618,0.523523743973798,4.70585190424811,4.09827290975067,1.45653105909346,0.125896817975577,0,0,0,0,0.219686182734472,0.194429899074283,2.51975558925653,0,32.2142603630854,8.70434570413613,9.41062637598899,0,0.85960031981627,0,0.202316460859598,0,0.633831403506179,2.71075625655306,1.77858959222228,41.8453368535851,54.3876499411836,50.4440881611731,17.6764065205859,13.4476406862544,0.311068836925433,0,0,0.285650984403804,0.220868540951614,0,0.191690942036473,0,0,1.27687338085188,0.921639199537461,0,0.0914876436024097,1.04182674111352,3.07101298901519,0,1.83357897332172,0.589257170947335,0.427115042397309,0.186399445825301,0,0.151143120213571,4.63783181922684,7.74381489283248,0,0,1.29955283489534,0,2.24711072210803,0,0,0.35333957451034,0,0,0,0,0,0,0,2.39786147410026,9.83963957859253,2.07818994690755,0.693941307064543,1.21786191324856,0.922461989024234,0.904335843315735,0.823120949949934,0.879666139307728,0.494389935468748,6.94076913215576,1.76922110389975,0.970601099684455,3.09178125844551,5.33362778448744,0,0.292780797011547,0.41889341362691,3.32094171771169,3.23500836165985,3.59941638596045,1.65191295194984,0.898743836428936,0.457500602818626,0,0.347648640384553,1.53429274398198,1.66230435647648,0.162241263067758,0.509196819251581,2.11491850037158,1.0108910337347,1.05220927943237,0.260240885925407,0.459804208866946,0.180062129805349,0.150704817835715,0.272145996605311,0.12811372028485,0.187403449119458,0.776110112217047,0,0.567318240503458,0,0.876782929710299,0.834141747676794,0.348252166522167,0.823128545631774,0.59710280045548,0.702213187313235,1.28673953557358,0.852490498186778,0.828503090142008,0.469052119962192,0.540186184383045,1.42046841351126,1.37734962223183,1.23413690309903,1.86027155800326,1.60964040839772,1.28441876603886,0.658239399653922,2.95501435342371,2.02672023864639,3.50879969820798,1.97595103761946,2.28150911892632,0.841159794256509,0.205809224758569,1.65209391491899,0.528901133327089,0.426576501070468,0,0.38660238396628,0.201683524623343,0.889512175379481,1.33157938278791,3.32170343081158,1.15289268306808,1.75934646160189,1.79060824837036,0.974820435595601,0.898819408654221,2.37751854862164,0.995706366271836,0.569003702859245,0.114248512609729,0,0.814605311381257,0.775809948670503,0.210407459670956,1.01178459398812,0.885660887877613,0.627994911365499,1.72756029490521,1.185810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| ||
|EntrezGene=14710 | |||
|HGNC= | |||
|MCL_coexpression_id=1599 | |||
|UniProt=Q61017,A2A614 | |||
|association_with_transcript=0bp_to_ENSMUST00000107714,NM_023121,uc007lau.1_5end | |||
|description=CAGE_peak_1_at_Gngt2_5end | |||
|id=chr11:95703597..95703621,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.72e-07!32;CL:0002032!1.72e-07!32;CL:0000037!1.72e-07!32;CL:0000566!1.72e-07!32;CL:0000837!1.72e-07!32;CL:0002031!2.20e-07!25;CL:0002320!9.40e-07!46;CL:0000134!9.40e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,3.37e-10,25;CL:0002320,6.61e-10,46;CL:0000134,6.61e-10,46;CL:0000988,2.51e-09,32;CL:0002032,2.51e-09,32;CL:0000037,2.51e-09,32;CL:0000837,2.51e-09,32;CL:0000738,6.90e-08,17;CL:0002087,6.90e-08,17;CL:0000219,2.45e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.62e-17!48;UBERON:0002405!1.59e-16!70;UBERON:0002390!1.48e-15!45;UBERON:0003061!1.48e-15!45;UBERON:0003081!3.39e-11!88;UBERON:0004177!1.54e-08!29;UBERON:0005057!2.72e-08!51;UBERON:0000926!2.98e-08!193;UBERON:0004120!2.98e-08!193;UBERON:0006603!2.98e-08!193;UBERON:0002371!3.59e-08!16;UBERON:0001474!7.79e-07!22;UBERON:0004765!7.79e-07!22;UBERON:0001434!7.79e-07!22;UBERON:0001041!8.14e-07!92;UBERON:0002384!9.40e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.61e-22,48;UBERON:0002405,7.61e-22,48;UBERON:0002390,1.24e-19,45;UBERON:0003061,1.24e-19,45;UBERON:0003081,1.31e-12,87;UBERON:0004177,1.17e-11,29;UBERON:0005057,1.17e-11,29;UBERON:0000077,1.89e-10,35;UBERON:0002384,6.61e-10,46;UBERON:0003408,4.78e-09,24;UBERON:0002371,8.64e-09,16;UBERON:0002370,1.10e-08,23;UBERON:0000974,1.10e-08,23;UBERON:0004807,1.10e-08,23;UBERON:0005058,1.10e-08,23;UBERON:0003351,1.10e-08,23;UBERON:0009113,1.10e-08,23;UBERON:0003295,1.10e-08,23;UBERON:0009722,1.10e-08,23;UBERON:0005562,1.10e-08,23;UBERON:0007690,1.10e-08,23;UBERON:0006562,5.22e-08,24;UBERON:0001557,5.22e-08,24;UBERON:0001042,5.22e-08,24;UBERON:0008814,5.22e-08,24;UBERON:0009145,5.22e-08,24;UBERON:0001474,1.34e-07,22;UBERON:0004765,1.34e-07,22;UBERON:0001434,1.34e-07,22;UBERON:0001041,2.23e-07,80;UBERON:0001004,4.45e-07,42;UBERON:0000926,6.51e-07,120;UBERON:0004120,6.51e-07,120;UBERON:0006603,6.51e-07,120;UBERON:0000065,9.26e-07,41 | |||
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| |||
|short_description=p1@Gngt2 | |||
}} | |||
Revision as of 21:37, 12 September 2013
| Short description: | p1@Gngt2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Gngt2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1599 |
| Association with transcript: | 0bp_to_ENSMUST00000107714, NM_023121, uc007lau.1_5end |
| EntrezGene: | Gngt2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic lineage restricted progenitor cell | 3.37e-10 | 25 |
| connective tissue cell | 6.61e-10 | 46 |
| mesenchymal cell | 6.61e-10 | 46 |
| hematopoietic cell | 2.51e-09 | 32 |
| hematopoietic oligopotent progenitor cell | 2.51e-09 | 32 |
| hematopoietic stem cell | 2.51e-09 | 32 |
| hematopoietic multipotent progenitor cell | 2.51e-09 | 32 |
| leukocyte | 6.90e-08 | 17 |
| nongranular leukocyte | 6.90e-08 | 17 |
| motile cell | 2.45e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
