FFCP PHASE1:Mm9::chr11:96805100..96805111,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=103711|HGNC=|MCL_coexpression_id=1604|UniProt=|association_with_transcript=-7bp_to_ENSMUST00000153896_5end|description=CAGE_peak_4_at_Pnpo_5end|id=chr11:96805100..96805111,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!5.01e-13!22;UBERON:0007499!5.01e-13!22;UBERON:0006925!5.01e-13!22;UBERON:0009497!5.01e-13!22;UBERON:0000015!5.01e-13!22;UBERON:0002423!5.01e-13!22;UBERON:0006235!5.01e-13!22;UBERON:0008835!5.01e-13!22;UBERON:0003894!5.01e-13!22;UBERON:0004161!5.01e-13!22;UBERON:0008836!5.01e-13!22;UBERON:0009854!9.12e-12!23;UBERON:0009856!9.12e-12!23;UBERON:0002365!3.26e-10!25;UBERON:0002330!3.26e-10!25;UBERON:0005409!1.08e-09!59;UBERON:0004119!2.38e-08!130;UBERON:0000925!2.38e-08!130;UBERON:0006595!2.38e-08!130;UBERON:0001007!3.41e-08!128;UBERON:0001555!3.41e-08!128;UBERON:0007026!3.41e-08!128;UBERON:0004923!8.64e-08!24;UBERON:0004921!9.56e-08!126;UBERON:0004185!9.56e-08!126;UBERON:0005172!1.04e-07!49;UBERON:0005173!1.04e-07!49;UBERON:0002417!1.04e-07!49;UBERON:0000916!1.04e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.36e-17,22;UBERON:0007499,2.36e-17,22;UBERON:0006925,2.36e-17,22;UBERON:0009497,2.36e-17,22;UBERON:0000015,2.36e-17,22;UBERON:0002423,2.36e-17,22;UBERON:0006235,2.36e-17,22;UBERON:0008835,2.36e-17,22;UBERON:0003894,2.36e-17,22;UBERON:0004161,2.36e-17,22;UBERON:0008836,2.36e-17,22;UBERON:0009854,3.33e-16,23;UBERON:0009856,3.33e-16,23;UBERON:0002365,3.38e-14,25;UBERON:0002330,3.38e-14,25;UBERON:0005409,3.43e-12,47;UBERON:0004119,5.83e-12,118;UBERON:0000925,5.83e-12,118;UBERON:0006595,5.83e-12,118;UBERON:0001007,7.00e-12,116;UBERON:0001555,7.00e-12,116;UBERON:0007026,7.00e-12,116;UBERON:0004921,3.19e-11,114;UBERON:0005172,5.71e-09,49;UBERON:0005173,5.71e-09,49;UBERON:0002417,5.71e-09,49;UBERON:0000916,5.71e-09,49;UBERON:0000160,2.06e-08,31;UBERON:0004923,5.12e-08,24;UBERON:0003929,6.20e-07,55|phase1_expression=0.160148847104794,2.44282785347553,0.454999239389536,4.53696316960245,8.5152274090879,1.00727563147134,2.33612640595526,0,3.37892933164,2.57470978954193,0.171217968225505,0.239316476986009,0.171200729931206,0.34968160967599,1.66554880907831,3.03712901084739,8.39474253753776,0,0.137114433605739,0,0.595303031057488,0.0992909512008853,0,1.75991665072747,1.37645568640302,1.72269589234506,2.15380998079537,1.29282739611533,7.41091335879858,4.28451220591882,1.77384408524244,0,0,0,1.1554064790051,0.664938581433969,0.816677425049476,0.837063261473815,0,0,0.588231488031014,0.683045484958446,0,0,0.101376931219515,0,0,0,0,0,0,0,0.838913030288682,2.17608642603403,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,0.883474163806454,0,0.0958454710182364,0,3.30347642998166,3.70293280447044,1.84327839907492,0.263772575460388,0.182975287204819,0.52091337055676,1.11673199600552,3.37657566019008,0.916789486660861,0.294628585473668,0.569486723196412,0.186399445825301,0,0,0.289864488701678,3.44169550792555,7.47968467078526,5.39703191637817,1.94932925234301,4.92829575807069,2.94933282276679,0,0,0,0,0,0,0,0.216491041011214,0,0,2.51204535381932,0,0.445326417194474,0.867426633830679,0.304465478312141,0.922461989024234,0.301445281105245,1.29347577849275,0.125666591329675,0.494389935468748,0.144599356919912,1.76922110389975,1.13236794963186,1.54589062922275,0.969750506270444,0,1.17112318804619,1.8850203613211,3.83185582812887,0.11981512450592,0,0,0.898743836428936,0,0.125654352112864,0.869121600961382,0.255715457330331,2.0778804455956,1.29793010454206,0,1.7416975885413,0.505445516867349,0.631325567659422,0.130120442962704,0.229902104433473,0.180062129805349,0.753524089178575,0.0680364991513279,0,0,0.776110112217047,0.215567992932842,0,0,0,0.278047249225598,0,0,0.59710280045548,0,0.51469581422943,0,0.828503090142008,0.234526059981096,0.540186184383045,0.473489471170421,0.393528463494808,0.617068451549513,0.465067889500816,0,0,0,0.32833492815819,0.162137619091711,0.438599962275997,0.658650345873152,0.134206418760372,0.210289948564127,0,6.27795687669216,0.793351699990633,0.213288250535234,0,0.902072229254653,1.61346819698674,3.11329261382818,3.42406127002606,2.84717436926707,2.30578536613615,3.51869292320377,4.17808591286417,2.33956904542944,0,3.02593269824572,3.38540164532424,0,0.456994050438915,0,0,0,0.140271639780637,0.126473074248515,0.442830443938806,0.470996183524124,0.123397163921801,9.78293669387591,9.84386123724955,10.8107447312262,12.8171404059367,13.5916281330297,18.0882869814313,15.5321769586666,6.61701116136864,11.5116011010275,3.0201755450689,2.87536413054709,2.60498663367952,2.80833905803104,2.77836765741823,3.22915344339442,10.1313139486307,0.739012760666419,0.37898282354097,0,0.169745085775188,0.234690248288502,0.167506257441816,0,1.36593553500459,0,0.44292937929755,0.318909537314974,0.81931657357869,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,1.76605648986571,1.87538698547525,0,0,0,0,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| ||
|EntrezGene=103711 | |||
|HGNC= | |||
|MCL_coexpression_id=1604 | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_ENSMUST00000153896_5end | |||
|description=CAGE_peak_4_at_Pnpo_5end | |||
|id=chr11:96805100..96805111,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.01e-13!22;UBERON:0007499!5.01e-13!22;UBERON:0006925!5.01e-13!22;UBERON:0009497!5.01e-13!22;UBERON:0000015!5.01e-13!22;UBERON:0002423!5.01e-13!22;UBERON:0006235!5.01e-13!22;UBERON:0008835!5.01e-13!22;UBERON:0003894!5.01e-13!22;UBERON:0004161!5.01e-13!22;UBERON:0008836!5.01e-13!22;UBERON:0009854!9.12e-12!23;UBERON:0009856!9.12e-12!23;UBERON:0002365!3.26e-10!25;UBERON:0002330!3.26e-10!25;UBERON:0005409!1.08e-09!59;UBERON:0004119!2.38e-08!130;UBERON:0000925!2.38e-08!130;UBERON:0006595!2.38e-08!130;UBERON:0001007!3.41e-08!128;UBERON:0001555!3.41e-08!128;UBERON:0007026!3.41e-08!128;UBERON:0004923!8.64e-08!24;UBERON:0004921!9.56e-08!126;UBERON:0004185!9.56e-08!126;UBERON:0005172!1.04e-07!49;UBERON:0005173!1.04e-07!49;UBERON:0002417!1.04e-07!49;UBERON:0000916!1.04e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.36e-17,22;UBERON:0007499,2.36e-17,22;UBERON:0006925,2.36e-17,22;UBERON:0009497,2.36e-17,22;UBERON:0000015,2.36e-17,22;UBERON:0002423,2.36e-17,22;UBERON:0006235,2.36e-17,22;UBERON:0008835,2.36e-17,22;UBERON:0003894,2.36e-17,22;UBERON:0004161,2.36e-17,22;UBERON:0008836,2.36e-17,22;UBERON:0009854,3.33e-16,23;UBERON:0009856,3.33e-16,23;UBERON:0002365,3.38e-14,25;UBERON:0002330,3.38e-14,25;UBERON:0005409,3.43e-12,47;UBERON:0004119,5.83e-12,118;UBERON:0000925,5.83e-12,118;UBERON:0006595,5.83e-12,118;UBERON:0001007,7.00e-12,116;UBERON:0001555,7.00e-12,116;UBERON:0007026,7.00e-12,116;UBERON:0004921,3.19e-11,114;UBERON:0005172,5.71e-09,49;UBERON:0005173,5.71e-09,49;UBERON:0002417,5.71e-09,49;UBERON:0000916,5.71e-09,49;UBERON:0000160,2.06e-08,31;UBERON:0004923,5.12e-08,24;UBERON:0003929,6.20e-07,55 | |||
|phase1_expression=0.160148847104794,2.44282785347553,0.454999239389536,4.53696316960245,8.5152274090879,1.00727563147134,2.33612640595526,0,3.37892933164,2.57470978954193,0.171217968225505,0.239316476986009,0.171200729931206,0.34968160967599,1.66554880907831,3.03712901084739,8.39474253753776,0,0.137114433605739,0,0.595303031057488,0.0992909512008853,0,1.75991665072747,1.37645568640302,1.72269589234506,2.15380998079537,1.29282739611533,7.41091335879858,4.28451220591882,1.77384408524244,0,0,0,1.1554064790051,0.664938581433969,0.816677425049476,0.837063261473815,0,0,0.588231488031014,0.683045484958446,0,0,0.101376931219515,0,0,0,0,0,0,0,0.838913030288682,2.17608642603403,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,0.883474163806454,0,0.0958454710182364,0,3.30347642998166,3.70293280447044,1.84327839907492,0.263772575460388,0.182975287204819,0.52091337055676,1.11673199600552,3.37657566019008,0.916789486660861,0.294628585473668,0.569486723196412,0.186399445825301,0,0,0.289864488701678,3.44169550792555,7.47968467078526,5.39703191637817,1.94932925234301,4.92829575807069,2.94933282276679,0,0,0,0,0,0,0,0.216491041011214,0,0,2.51204535381932,0,0.445326417194474,0.867426633830679,0.304465478312141,0.922461989024234,0.301445281105245,1.29347577849275,0.125666591329675,0.494389935468748,0.144599356919912,1.76922110389975,1.13236794963186,1.54589062922275,0.969750506270444,0,1.17112318804619,1.8850203613211,3.83185582812887,0.11981512450592,0,0,0.898743836428936,0,0.125654352112864,0.869121600961382,0.255715457330331,2.0778804455956,1.29793010454206,0,1.7416975885413,0.505445516867349,0.631325567659422,0.130120442962704,0.229902104433473,0.180062129805349,0.753524089178575,0.0680364991513279,0,0,0.776110112217047,0.215567992932842,0,0,0,0.278047249225598,0,0,0.59710280045548,0,0.51469581422943,0,0.828503090142008,0.234526059981096,0.540186184383045,0.473489471170421,0.393528463494808,0.617068451549513,0.465067889500816,0,0,0,0.32833492815819,0.162137619091711,0.438599962275997,0.658650345873152,0.134206418760372,0.210289948564127,0,6.27795687669216,0.793351699990633,0.213288250535234,0,0.902072229254653,1.61346819698674,3.11329261382818,3.42406127002606,2.84717436926707,2.30578536613615,3.51869292320377,4.17808591286417,2.33956904542944,0,3.02593269824572,3.38540164532424,0,0.456994050438915,0,0,0,0.140271639780637,0.126473074248515,0.442830443938806,0.470996183524124,0.123397163921801,9.78293669387591,9.84386123724955,10.8107447312262,12.8171404059367,13.5916281330297,18.0882869814313,15.5321769586666,6.61701116136864,11.5116011010275,3.0201755450689,2.87536413054709,2.60498663367952,2.80833905803104,2.77836765741823,3.22915344339442,10.1313139486307,0.739012760666419,0.37898282354097,0,0.169745085775188,0.234690248288502,0.167506257441816,0,1.36593553500459,0,0.44292937929755,0.318909537314974,0.81931657357869,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,1.76605648986571,1.87538698547525,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0.302323556964751,0.377210159511796,0.885905678642318,0.614870295887855,2.32585463851399,0.727067458955011,0.712994756769443,0,0,2.06271086496374,1.02131881726136,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0,0.23467170806371,1.69465656691056,0.220528398054962,0.32977250588296,0.161464426695906,0.180938774784468,0.119372344003136,0.164140899745061,4.08073171281791,0.927126510052548,2.39219233116994,1.03193433981611,4.44466865687308,4.1441060541032,4.23752105935178,3.20289442489132,0.509935289981566,1.11961161858926,0.552799895217695,2.86401185404534,0.632671987162271,0.203319467126849,0.216010681643603,0.418176592028937,1.52853794622324,1.61837215661785,1.73572257023205,1.04702376793612,7.77689839750757,0,0,0.149516546043979,0.330916980914195,0,0,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0.316011120628178,0,0.616265742988964,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.665957860122194,0.179427713218951,0.167884616364078,0,0,0.549454872801795,0,0,0.564751842617067,1.38097570952153,1.71868654031819,1.03111909406213,0.685082519770642,1.5107877947794,0.675022500231806,0.45032120322422,1.35942722695261,0.51776031175182,0.103787347584177,0.399024873401031,2.90247129782028,2.67417388775123,3.14419743941973,1.65459157605013,1.33348036680969,1.44224540067226,2.24643446714271,1.26348605881899,0.25347929989024,2.07488975524684,1.40462261204824,1.28050304809739,0.976402972245426,0.952587382566147,1.27472758539341,1.35036454324594,2.47251540481984,1.17759136107518,0.685738504770831,1.24233064311536,1.43061713968393,1.74415699958794,1.2234219453993,1.35383372626682,2.37806364734604,2.36762740294059,1.62964936615034,0,0.949080144993393,1.87158516513571,3.27384834535751,1.54936841185966,1.15743966588685,0.749431733813838,0.467863216890817,1.50409737833809,0.57386499620653,1.10295709559758,0.231867835620421 | |||
|short_description=p4@Pnpo | |||
}} |
Revision as of 21:42, 12 September 2013
Short description: | p4@Pnpo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pnpo_5end |
Coexpression cluster: | MCL_coexpression_mm9:1604 |
Association with transcript: | -7bp_to_ENSMUST00000153896_5end |
EntrezGene: | Pnpo |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 2.36e-17 | 22 |
epithelial sac | 2.36e-17 | 22 |
digestive gland | 2.36e-17 | 22 |
epithelium of foregut-midgut junction | 2.36e-17 | 22 |
anatomical boundary | 2.36e-17 | 22 |
hepatobiliary system | 2.36e-17 | 22 |
foregut-midgut junction | 2.36e-17 | 22 |
hepatic diverticulum | 2.36e-17 | 22 |
liver primordium | 2.36e-17 | 22 |
septum transversum | 2.36e-17 | 22 |
liver bud | 2.36e-17 | 22 |
digestive tract diverticulum | 3.33e-16 | 23 |
sac | 3.33e-16 | 23 |
exocrine gland | 3.38e-14 | 25 |
exocrine system | 3.38e-14 | 25 |
gastrointestinal system | 3.43e-12 | 47 |
endoderm-derived structure | 5.83e-12 | 118 |
endoderm | 5.83e-12 | 118 |
presumptive endoderm | 5.83e-12 | 118 |
digestive system | 7.00e-12 | 116 |
digestive tract | 7.00e-12 | 116 |
primitive gut | 7.00e-12 | 116 |
subdivision of digestive tract | 3.19e-11 | 114 |
abdomen element | 5.71e-09 | 49 |
abdominal segment element | 5.71e-09 | 49 |
abdominal segment of trunk | 5.71e-09 | 49 |
abdomen | 5.71e-09 | 49 |
intestine | 2.06e-08 | 31 |
organ component layer | 5.12e-08 | 24 |
gut epithelium | 6.20e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.