FFCP PHASE1:Mm9::chr12:114665618..114665633,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=320|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114665618..114665633,-|id=chr12:114665618..114665633,-|ontology_enrichment_celltype=CL:0000988!1.34e-13!32;CL:0002032!1.34e-13!32;CL:0000037!1.34e-13!32;CL:0000566!1.34e-13!32;CL:0000837!1.34e-13!32;CL:0000838!7.59e-13!12;CL:0000084!1.24e-11!11;CL:0000827!1.24e-11!11;CL:0000542!1.49e-11!13;CL:0000051!1.49e-11!13;CL:0002031!1.72e-10!25;CL:0000791!2.46e-09!9;CL:0000789!2.46e-09!9;CL:0002420!2.46e-09!9;CL:0002419!2.46e-09!9;CL:0000790!2.46e-09!9;CL:0000624!3.39e-08!8;CL:0002320!4.84e-08!46;CL:0000134!4.84e-08!46;CL:0000738!6.05e-08!17;CL:0002087!6.05e-08!17|ontology_enrichment_celltype_v019_2=CL:0000988,3.04e-21,32;CL:0002032,3.04e-21,32;CL:0000037,3.04e-21,32;CL:0000837,3.04e-21,32;CL:0000838,1.34e-18,12;CL:0000542,5.23e-17,13;CL:0000051,5.23e-17,13;CL:0002031,1.53e-16,25;CL:0000084,3.04e-16,11;CL:0000827,3.04e-16,11;CL:0002320,1.97e-13,46;CL:0000134,1.97e-13,46;CL:0000738,1.63e-12,17;CL:0002087,1.63e-12,17;CL:0000791,7.80e-12,9;CL:0000789,7.80e-12,9;CL:0002420,7.80e-12,9;CL:0002419,7.80e-12,9;CL:0000790,7.80e-12,9;CL:0000219,8.44e-11,54;CL:0000624,1.05e-09,8;CL:0000049,2.26e-07,19;CL:0000553,3.27e-07,6;CL:0000556,3.27e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.79e-18!48;UBERON:0002390!1.05e-15!45;UBERON:0003061!1.05e-15!45;UBERON:0004177!2.59e-15!29;UBERON:0002370!1.16e-13!23;UBERON:0000974!1.16e-13!23;UBERON:0004807!1.16e-13!23;UBERON:0005058!1.16e-13!23;UBERON:0003351!1.16e-13!23;UBERON:0009113!1.16e-13!23;UBERON:0003295!1.16e-13!23;UBERON:0009722!1.16e-13!23;UBERON:0005562!1.16e-13!23;UBERON:0007690!1.16e-13!23;UBERON:0002405!4.31e-13!70;UBERON:0006562!7.92e-13!24;UBERON:0003408!7.92e-13!24;UBERON:0001557!7.92e-13!24;UBERON:0001042!7.92e-13!24;UBERON:0008814!7.92e-13!24;UBERON:0009145!7.92e-13!24;UBERON:0000072!1.03e-10!27;UBERON:0000065!2.85e-10!41;UBERON:0001004!7.61e-10!42;UBERON:0005057!1.75e-09!51;UBERON:0003081!1.29e-08!88;UBERON:0002384!4.84e-08!46;UBERON:0000063!5.95e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.20e-22,48;UBERON:0002405,2.20e-22,48;UBERON:0002390,7.36e-22,45;UBERON:0003061,7.36e-22,45;UBERON:0004177,8.28e-21,29;UBERON:0005057,8.28e-21,29;UBERON:0002370,9.92e-19,23;UBERON:0000974,9.92e-19,23;UBERON:0004807,9.92e-19,23;UBERON:0005058,9.92e-19,23;UBERON:0003351,9.92e-19,23;UBERON:0009113,9.92e-19,23;UBERON:0003295,9.92e-19,23;UBERON:0009722,9.92e-19,23;UBERON:0005562,9.92e-19,23;UBERON:0007690,9.92e-19,23;UBERON:0006562,8.30e-18,24;UBERON:0003408,8.30e-18,24;UBERON:0001557,8.30e-18,24;UBERON:0001042,8.30e-18,24;UBERON:0008814,8.30e-18,24;UBERON:0009145,8.30e-18,24;UBERON:0000077,1.58e-16,35;UBERON:0000072,1.88e-15,27;UBERON:0002384,1.97e-13,46;UBERON:0007811,9.37e-11,36;UBERON:0000065,2.29e-10,41;UBERON:0001004,4.90e-10,42;UBERON:0003081,1.03e-09,87;UBERON:0000153,1.78e-08,43|phase1_expression=0,0,0,0,0,0,0,3.74457637980571,2.111830832275,1.40438715793196,0.34243593645101,0.159544317990673,4.45121897821135,1.31130603628496,0.999329285446988,2.42970320867791,0,12.7762176970086,14.9454732630255,10.1853516431527,0.340173160604279,10.9220046320974,8.61959304158487,0.319984845586813,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,27.348564787411,2.17608642603403,9.41062637598899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68510327831436,7.76813650941515,0,0,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0,0,0,9.10594946244994,3.59941638596045,6.86179226194549,0.149790639404823,0,0,0,0,0,0,0,1.24406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,2.55747149456033,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482354319504834,0.50925170356284,0.287696137450811,0.486405680325106,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0.234690248288502,0,0,0,0,0.221464689648775,0,0.491589944147214,0.518054945597687,1.01254341007058,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,1.02522528478712,0,0,0.565105371014073,2.05041341581538,1.83022538565218,4.07948231985253,6.43776680688827,6.49539876880792,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0.314578033277133,0,0,0.632022241256357,0.202725215290164,0,1.03936658382236,2.32734704367726,1.98681354781265,2.64429988943931,3.10148007066612,2.22126189885925,3.81034033274999,1.20991422164209,1.8516997340553,2.02044867444692,5.37633750035217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421|short_description=p@chr12:114665618..114665633,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=320 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:114665618..114665633,- | |||
|id=chr12:114665618..114665633,- | |||
|ontology_enrichment_celltype=CL:0000988!1.34e-13!32;CL:0002032!1.34e-13!32;CL:0000037!1.34e-13!32;CL:0000566!1.34e-13!32;CL:0000837!1.34e-13!32;CL:0000838!7.59e-13!12;CL:0000084!1.24e-11!11;CL:0000827!1.24e-11!11;CL:0000542!1.49e-11!13;CL:0000051!1.49e-11!13;CL:0002031!1.72e-10!25;CL:0000791!2.46e-09!9;CL:0000789!2.46e-09!9;CL:0002420!2.46e-09!9;CL:0002419!2.46e-09!9;CL:0000790!2.46e-09!9;CL:0000624!3.39e-08!8;CL:0002320!4.84e-08!46;CL:0000134!4.84e-08!46;CL:0000738!6.05e-08!17;CL:0002087!6.05e-08!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.04e-21,32;CL:0002032,3.04e-21,32;CL:0000037,3.04e-21,32;CL:0000837,3.04e-21,32;CL:0000838,1.34e-18,12;CL:0000542,5.23e-17,13;CL:0000051,5.23e-17,13;CL:0002031,1.53e-16,25;CL:0000084,3.04e-16,11;CL:0000827,3.04e-16,11;CL:0002320,1.97e-13,46;CL:0000134,1.97e-13,46;CL:0000738,1.63e-12,17;CL:0002087,1.63e-12,17;CL:0000791,7.80e-12,9;CL:0000789,7.80e-12,9;CL:0002420,7.80e-12,9;CL:0002419,7.80e-12,9;CL:0000790,7.80e-12,9;CL:0000219,8.44e-11,54;CL:0000624,1.05e-09,8;CL:0000049,2.26e-07,19;CL:0000553,3.27e-07,6;CL:0000556,3.27e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.79e-18!48;UBERON:0002390!1.05e-15!45;UBERON:0003061!1.05e-15!45;UBERON:0004177!2.59e-15!29;UBERON:0002370!1.16e-13!23;UBERON:0000974!1.16e-13!23;UBERON:0004807!1.16e-13!23;UBERON:0005058!1.16e-13!23;UBERON:0003351!1.16e-13!23;UBERON:0009113!1.16e-13!23;UBERON:0003295!1.16e-13!23;UBERON:0009722!1.16e-13!23;UBERON:0005562!1.16e-13!23;UBERON:0007690!1.16e-13!23;UBERON:0002405!4.31e-13!70;UBERON:0006562!7.92e-13!24;UBERON:0003408!7.92e-13!24;UBERON:0001557!7.92e-13!24;UBERON:0001042!7.92e-13!24;UBERON:0008814!7.92e-13!24;UBERON:0009145!7.92e-13!24;UBERON:0000072!1.03e-10!27;UBERON:0000065!2.85e-10!41;UBERON:0001004!7.61e-10!42;UBERON:0005057!1.75e-09!51;UBERON:0003081!1.29e-08!88;UBERON:0002384!4.84e-08!46;UBERON:0000063!5.95e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.20e-22,48;UBERON:0002405,2.20e-22,48;UBERON:0002390,7.36e-22,45;UBERON:0003061,7.36e-22,45;UBERON:0004177,8.28e-21,29;UBERON:0005057,8.28e-21,29;UBERON:0002370,9.92e-19,23;UBERON:0000974,9.92e-19,23;UBERON:0004807,9.92e-19,23;UBERON:0005058,9.92e-19,23;UBERON:0003351,9.92e-19,23;UBERON:0009113,9.92e-19,23;UBERON:0003295,9.92e-19,23;UBERON:0009722,9.92e-19,23;UBERON:0005562,9.92e-19,23;UBERON:0007690,9.92e-19,23;UBERON:0006562,8.30e-18,24;UBERON:0003408,8.30e-18,24;UBERON:0001557,8.30e-18,24;UBERON:0001042,8.30e-18,24;UBERON:0008814,8.30e-18,24;UBERON:0009145,8.30e-18,24;UBERON:0000077,1.58e-16,35;UBERON:0000072,1.88e-15,27;UBERON:0002384,1.97e-13,46;UBERON:0007811,9.37e-11,36;UBERON:0000065,2.29e-10,41;UBERON:0001004,4.90e-10,42;UBERON:0003081,1.03e-09,87;UBERON:0000153,1.78e-08,43 | |||
|phase1_expression=0,0,0,0,0,0,0,3.74457637980571,2.111830832275,1.40438715793196,0.34243593645101,0.159544317990673,4.45121897821135,1.31130603628496,0.999329285446988,2.42970320867791,0,12.7762176970086,14.9454732630255,10.1853516431527,0.340173160604279,10.9220046320974,8.61959304158487,0.319984845586813,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,27.348564787411,2.17608642603403,9.41062637598899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68510327831436,7.76813650941515,0,0,0,0,0.150722640552623,0,0,0,0,0.884610551949874,0,0.220841518460394,0.969750506270444,0,0,0,0,9.10594946244994,3.59941638596045,6.86179226194549,0.149790639404823,0,0,0,0,0,0,0,1.24406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,2.55747149456033,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482354319504834,0.50925170356284,0.287696137450811,0.486405680325106,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0.234690248288502,0,0,0,0,0.221464689648775,0,0.491589944147214,0.518054945597687,1.01254341007058,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,1.02522528478712,0,0,0.565105371014073,2.05041341581538,1.83022538565218,4.07948231985253,6.43776680688827,6.49539876880792,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0.314578033277133,0,0,0.632022241256357,0.202725215290164,0,1.03936658382236,2.32734704367726,1.98681354781265,2.64429988943931,3.10148007066612,2.22126189885925,3.81034033274999,1.20991422164209,1.8516997340553,2.02044867444692,5.37633750035217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr12:114665618..114665633,- | |||
}} |
Revision as of 22:27, 12 September 2013
Short description: | p@chr12:114665618..114665633, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114665618..114665633, - |
Coexpression cluster: | MCL_coexpression_mm9:320 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.04e-21 | 32 |
hematopoietic oligopotent progenitor cell | 3.04e-21 | 32 |
hematopoietic stem cell | 3.04e-21 | 32 |
hematopoietic multipotent progenitor cell | 3.04e-21 | 32 |
lymphoid lineage restricted progenitor cell | 1.34e-18 | 12 |
lymphocyte | 5.23e-17 | 13 |
common lymphoid progenitor | 5.23e-17 | 13 |
hematopoietic lineage restricted progenitor cell | 1.53e-16 | 25 |
T cell | 3.04e-16 | 11 |
pro-T cell | 3.04e-16 | 11 |
connective tissue cell | 1.97e-13 | 46 |
mesenchymal cell | 1.97e-13 | 46 |
leukocyte | 1.63e-12 | 17 |
nongranular leukocyte | 1.63e-12 | 17 |
mature alpha-beta T cell | 7.80e-12 | 9 |
alpha-beta T cell | 7.80e-12 | 9 |
immature T cell | 7.80e-12 | 9 |
mature T cell | 7.80e-12 | 9 |
immature alpha-beta T cell | 7.80e-12 | 9 |
motile cell | 8.44e-11 | 54 |
CD4-positive, alpha-beta T cell | 1.05e-09 | 8 |
common myeloid progenitor | 2.26e-07 | 19 |
megakaryocyte progenitor cell | 3.27e-07 | 6 |
megakaryocyte | 3.27e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.20e-22 | 48 |
immune system | 2.20e-22 | 48 |
hematopoietic system | 7.36e-22 | 45 |
blood island | 7.36e-22 | 45 |
hemopoietic organ | 8.28e-21 | 29 |
immune organ | 8.28e-21 | 29 |
thymus | 9.92e-19 | 23 |
neck | 9.92e-19 | 23 |
respiratory system epithelium | 9.92e-19 | 23 |
hemolymphoid system gland | 9.92e-19 | 23 |
pharyngeal epithelium | 9.92e-19 | 23 |
thymic region | 9.92e-19 | 23 |
pharyngeal gland | 9.92e-19 | 23 |
entire pharyngeal arch endoderm | 9.92e-19 | 23 |
thymus primordium | 9.92e-19 | 23 |
early pharyngeal endoderm | 9.92e-19 | 23 |
pharynx | 8.30e-18 | 24 |
gland of gut | 8.30e-18 | 24 |
upper respiratory tract | 8.30e-18 | 24 |
chordate pharynx | 8.30e-18 | 24 |
pharyngeal arch system | 8.30e-18 | 24 |
pharyngeal region of foregut | 8.30e-18 | 24 |
mixed endoderm/mesoderm-derived structure | 1.58e-16 | 35 |
segment of respiratory tract | 1.88e-15 | 27 |
connective tissue | 1.97e-13 | 46 |
craniocervical region | 9.37e-11 | 36 |
respiratory tract | 2.29e-10 | 41 |
respiratory system | 4.90e-10 | 42 |
lateral plate mesoderm | 1.03e-09 | 87 |
anterior region of body | 1.78e-08 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.