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FFCP PHASE1:Mm9::chr12:119539902..119539931,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20688|HGNC=|MCL_coexpression_id=2774|UniProt=Q62445,Q6DFV2|association_with_transcript=0bp_to_ENSMUST00000026367,NM_001166385,NM_009239,uc007pif.2,uc011yvt.1_5end|description=CAGE_peak_2_at_Sp4_5end|id=chr12:119539902..119539931,-|ontology_enrichment_celltype=CL:0000117!1.98e-09!23;CL:0000337!1.98e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.77e-09,23;CL:0000337,1.77e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.66e-16!94;UBERON:0007811!2.29e-16!86;UBERON:0001049!2.76e-12!52;UBERON:0005068!2.76e-12!52;UBERON:0006241!2.76e-12!52;UBERON:0007135!2.76e-12!52;UBERON:0003056!4.09e-12!49;UBERON:0000033!7.75e-12!63;UBERON:0000955!1.11e-11!50;UBERON:0006238!1.11e-11!50;UBERON:0002020!1.68e-11!34;UBERON:0002616!4.03e-11!49;UBERON:0001017!1.15e-10!73;UBERON:0005743!1.15e-10!73;UBERON:0002346!2.01e-10!71;UBERON:0003075!2.01e-10!71;UBERON:0007284!2.01e-10!71;UBERON:0003080!3.06e-10!40;UBERON:0000073!4.86e-10!75;UBERON:0001016!4.86e-10!75;UBERON:0002780!5.37e-10!39;UBERON:0001890!5.37e-10!39;UBERON:0006240!5.37e-10!39;UBERON:0002791!9.00e-10!29;UBERON:0003528!9.00e-10!29;UBERON:0001893!9.00e-10!29;UBERON:0000477!7.30e-07!154;UBERON:0000475!8.68e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.14e-13,64;UBERON:0003075,1.14e-13,64;UBERON:0007284,1.14e-13,64;UBERON:0000073,5.96e-13,54;UBERON:0001049,2.37e-12,52;UBERON:0005068,2.37e-12,52;UBERON:0006241,2.37e-12,52;UBERON:0007135,2.37e-12,52;UBERON:0003056,3.52e-12,49;UBERON:0002020,1.45e-11,34;UBERON:0000955,3.82e-11,47;UBERON:0006238,3.82e-11,47;UBERON:0001017,1.23e-10,73;UBERON:0002616,1.38e-10,46;UBERON:0003080,2.70e-10,40;UBERON:0010371,2.93e-10,73;UBERON:0002780,4.76e-10,39;UBERON:0001890,4.76e-10,39;UBERON:0006240,4.76e-10,39;UBERON:0001016,5.22e-10,75;UBERON:0003528,8.01e-10,29;UBERON:0002791,8.01e-10,29;UBERON:0001893,8.01e-10,29;UBERON:0004121,4.98e-08,95;UBERON:0000924,4.98e-08,95;UBERON:0006601,4.98e-08,95|phase1_expression=2.40223270657191,0.348975407639361,0,0.90739263392049,0.500895729946347,1.17515490338323,0.467225281191051,11.7502224331834,8.30653460694834,7.49006484230379,3.76679530096111,3.11111420081812,9.75844160607873,12.7633787531736,3.99731714178795,4.85940641735582,12.5921138063066,6.30924330716475,7.95263714913285,2.54633791078818,3.82694805679814,1.88652807281682,2.08959831311148,0.639969691173627,0.22940928106717,1.72269589234506,0.430761996159075,0.215471232685889,0.190023419456374,1.00812051903972,0.221730510655305,1.27006134691926,0,0,0.866554859253824,0.498703936075477,1.22501613757421,7.11503772252743,1.5626706890476,5.75876118371178,7.64700934440319,5.46436387966757,8.73918635456076,0.881277725829041,0.506884656097573,0.550640256485045,3.12956537739216,1.30815093828268,1.75748946187577,1.74986909166855,1.53985063787899,2.87505128729943,7.71799987865587,11.6057942721815,17.1407837562657,0.514518872071894,2.57880095944881,1.03134418455488,7.28339259094552,4.7609188134483,3.80298842103708,1.0165335962074,0.889294796111139,0.899899717281399,0,1.4209602298922,0.299600110518405,1.53687322128622,8.39885859698669,6.07526722492608,5.25812403378455,4.57041575046086,3.3130281142742,9.0643191419066,6.51749202924007,6.43453150627015,3.30347642998166,5.36286819957788,3.68655679814984,4.61602007055678,7.50198677539759,7.8137005583514,3.90856198601933,3.93933827022176,5.04234217663473,5.30331453852602,5.69486723196412,7.82877672466262,1.59025005999687,1.96486056277642,3.18850937571846,0,0,0.539703191637817,1.94932925234301,0.896053774194671,2.52799956237153,0.340860645156116,0.259786004602869,0.35333957451034,2.67602497575693,0,0,0,0,0.760079596425296,0,2.16949371466214,9.83963957859253,2.82040064223167,0.867426633830679,1.21786191324856,0.922461989024234,1.3565037649736,1.17588707135705,1.13099932196708,0.988779870937496,2.16899035379867,6.19227386364912,2.42650274921114,3.75430581382669,2.42437626567611,1.86391761218122,7.90508151931177,7.74952815209784,1.02182822083437,2.15667224110656,2.39961092397363,1.77898317902291,4.19413790333504,6.8625090422794,14.9528679014309,4.34560800480691,3.83573185995496,3.74018480207208,5.19172041816825,3.7680564624617,2.73695335342205,2.0217820674694,5.05060454127538,3.3831315170303,2.29902104433473,3.96136685571768,2.71268672104287,6.87168641428411,5.12454881139399,5.05989312622536,5.17406741478031,6.46703978798527,3.21480336285293,2.46331573829528,3.06874025398605,2.50242524303038,2.089512999133,1.23469281844766,2.7864797354589,1.40442637462647,0.772043721344145,1.13665399758237,3.10688658803253,2.11073453982987,2.34080679899319,3.07768156260773,2.36117078096885,2.31400669331067,1.86027155800326,1.87791380979733,3.50296027101508,2.46839774870221,1.80584210487005,2.02672023864639,1.90059983652932,1.09775057645525,2.28150911892632,4.41608891984667,6.68879980465349,1.65209391491899,0.264450566663544,2.13288250535234,3.71578674976702,3.35055399437443,1.61346819698674,2.2237804384487,1.33157938278791,0.94905812308902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|EntrezGene=20688
|HGNC=
|MCL_coexpression_id=2774
|UniProt=Q62445,Q6DFV2
|association_with_transcript=0bp_to_ENSMUST00000026367,NM_001166385,NM_009239,uc007pif.2,uc011yvt.1_5end
|description=CAGE_peak_2_at_Sp4_5end
|id=chr12:119539902..119539931,-
|ontology_enrichment_celltype=CL:0000117!1.98e-09!23;CL:0000337!1.98e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.77e-09,23;CL:0000337,1.77e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.66e-16!94;UBERON:0007811!2.29e-16!86;UBERON:0001049!2.76e-12!52;UBERON:0005068!2.76e-12!52;UBERON:0006241!2.76e-12!52;UBERON:0007135!2.76e-12!52;UBERON:0003056!4.09e-12!49;UBERON:0000033!7.75e-12!63;UBERON:0000955!1.11e-11!50;UBERON:0006238!1.11e-11!50;UBERON:0002020!1.68e-11!34;UBERON:0002616!4.03e-11!49;UBERON:0001017!1.15e-10!73;UBERON:0005743!1.15e-10!73;UBERON:0002346!2.01e-10!71;UBERON:0003075!2.01e-10!71;UBERON:0007284!2.01e-10!71;UBERON:0003080!3.06e-10!40;UBERON:0000073!4.86e-10!75;UBERON:0001016!4.86e-10!75;UBERON:0002780!5.37e-10!39;UBERON:0001890!5.37e-10!39;UBERON:0006240!5.37e-10!39;UBERON:0002791!9.00e-10!29;UBERON:0003528!9.00e-10!29;UBERON:0001893!9.00e-10!29;UBERON:0000477!7.30e-07!154;UBERON:0000475!8.68e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.14e-13,64;UBERON:0003075,1.14e-13,64;UBERON:0007284,1.14e-13,64;UBERON:0000073,5.96e-13,54;UBERON:0001049,2.37e-12,52;UBERON:0005068,2.37e-12,52;UBERON:0006241,2.37e-12,52;UBERON:0007135,2.37e-12,52;UBERON:0003056,3.52e-12,49;UBERON:0002020,1.45e-11,34;UBERON:0000955,3.82e-11,47;UBERON:0006238,3.82e-11,47;UBERON:0001017,1.23e-10,73;UBERON:0002616,1.38e-10,46;UBERON:0003080,2.70e-10,40;UBERON:0010371,2.93e-10,73;UBERON:0002780,4.76e-10,39;UBERON:0001890,4.76e-10,39;UBERON:0006240,4.76e-10,39;UBERON:0001016,5.22e-10,75;UBERON:0003528,8.01e-10,29;UBERON:0002791,8.01e-10,29;UBERON:0001893,8.01e-10,29;UBERON:0004121,4.98e-08,95;UBERON:0000924,4.98e-08,95;UBERON:0006601,4.98e-08,95
|phase1_expression=2.40223270657191,0.348975407639361,0,0.90739263392049,0.500895729946347,1.17515490338323,0.467225281191051,11.7502224331834,8.30653460694834,7.49006484230379,3.76679530096111,3.11111420081812,9.75844160607873,12.7633787531736,3.99731714178795,4.85940641735582,12.5921138063066,6.30924330716475,7.95263714913285,2.54633791078818,3.82694805679814,1.88652807281682,2.08959831311148,0.639969691173627,0.22940928106717,1.72269589234506,0.430761996159075,0.215471232685889,0.190023419456374,1.00812051903972,0.221730510655305,1.27006134691926,0,0,0.866554859253824,0.498703936075477,1.22501613757421,7.11503772252743,1.5626706890476,5.75876118371178,7.64700934440319,5.46436387966757,8.73918635456076,0.881277725829041,0.506884656097573,0.550640256485045,3.12956537739216,1.30815093828268,1.75748946187577,1.74986909166855,1.53985063787899,2.87505128729943,7.71799987865587,11.6057942721815,17.1407837562657,0.514518872071894,2.57880095944881,1.03134418455488,7.28339259094552,4.7609188134483,3.80298842103708,1.0165335962074,0.889294796111139,0.899899717281399,0,1.4209602298922,0.299600110518405,1.53687322128622,8.39885859698669,6.07526722492608,5.25812403378455,4.57041575046086,3.3130281142742,9.0643191419066,6.51749202924007,6.43453150627015,3.30347642998166,5.36286819957788,3.68655679814984,4.61602007055678,7.50198677539759,7.8137005583514,3.90856198601933,3.93933827022176,5.04234217663473,5.30331453852602,5.69486723196412,7.82877672466262,1.59025005999687,1.96486056277642,3.18850937571846,0,0,0.539703191637817,1.94932925234301,0.896053774194671,2.52799956237153,0.340860645156116,0.259786004602869,0.35333957451034,2.67602497575693,0,0,0,0,0.760079596425296,0,2.16949371466214,9.83963957859253,2.82040064223167,0.867426633830679,1.21786191324856,0.922461989024234,1.3565037649736,1.17588707135705,1.13099932196708,0.988779870937496,2.16899035379867,6.19227386364912,2.42650274921114,3.75430581382669,2.42437626567611,1.86391761218122,7.90508151931177,7.74952815209784,1.02182822083437,2.15667224110656,2.39961092397363,1.77898317902291,4.19413790333504,6.8625090422794,14.9528679014309,4.34560800480691,3.83573185995496,3.74018480207208,5.19172041816825,3.7680564624617,2.73695335342205,2.0217820674694,5.05060454127538,3.3831315170303,2.29902104433473,3.96136685571768,2.71268672104287,6.87168641428411,5.12454881139399,5.05989312622536,5.17406741478031,6.46703978798527,3.21480336285293,2.46331573829528,3.06874025398605,2.50242524303038,2.089512999133,1.23469281844766,2.7864797354589,1.40442637462647,0.772043721344145,1.13665399758237,3.10688658803253,2.11073453982987,2.34080679899319,3.07768156260773,2.36117078096885,2.31400669331067,1.86027155800326,1.87791380979733,3.50296027101508,2.46839774870221,1.80584210487005,2.02672023864639,1.90059983652932,1.09775057645525,2.28150911892632,4.41608891984667,6.68879980465349,1.65209391491899,0.264450566663544,2.13288250535234,3.71578674976702,3.35055399437443,1.61346819698674,2.2237804384487,1.33157938278791,0.949058123089023,1.15289268306808,1.50801125280162,2.98434708061726,1.36474860983384,0,0.864552199498777,1.39398891278057,1.89667900953082,2.28497025219458,2.25415471346161,3.05476991767971,3.68509725618489,4.41855665309007,2.59269802209455,3.24742325555125,0.941992367048249,2.09775178667061,0.592905254174298,2.00214126859313,2.35870794135844,2.47348323623339,4.26006254915856,4.10001171579109,2.29163266603278,3.45235364940973,3.56697498905078,1.37280706594041,4.31304619582064,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,4.43407656399851,2.4633883530163,1.95557971730431,2.54617628662782,2.58159273117352,3.01511263395268,3.57065461329021,4.68320754858717,0.945810864637146,3.32197034473162,3.02964060449226,3.4411296090305,3.10832967358612,3.18227928879325,0,3.80733978673097,0.491764273019036,0.551873492609465,2.40825884981688,3.28192722458169,0.655739781506702,2.27223834483936,3.78609863299508,0.780877488593277,2.80050417052639,1.67278158566786,2.45078541490634,3.11384183867716,0.809621403349789,2.04579100537918,3.16230222357219,8.35435422696698,2.83880170416537,1.6025904330053,4.0721739838394,3.62934270539578,0,2.6705869977048,1.81394134178851,1.50884063804718,0.295301892880773,0.922305443831782,1.55056975900933,2.18120237686503,3.20847640546249,1.58018378967908,1.05418608574999,2.06271086496374,6.12791290356818,5.58189391497062,2.19909762430683,2.14337035031592,2.83744373827638,3.38900753443934,3.45552943264454,2.13125464380219,0.23467170806371,1.48282449604674,2.42581237860458,3.13283880588812,2.26050197374268,2.11095237248546,0.596861720015682,0.820704498725306,1.45740418314925,3.15223013417866,5.63873906632914,2.68302928352189,3.1483069652851,5.27431679613135,6.83471138605126,5.49067615695654,3.90950388985867,5.59805809294632,5.38979897837253,0.954670618015114,4.11236791655476,3.04979200690273,1.62008011232702,1.25452977608681,0.655087691238533,1.07891477107857,2.39695021603474,1.04702376793612,1.29614973291793,0,0.56369293868419,2.8408143748356,2.31641886639937,4.4723773319131,2.97067593998782,2.70329800785245,3.87278887530988,4.6873578543822,4.92838918800841,1.69108884578204,1.44015003128933,4.74016680942267,4.05450430580328,2.46506297195585,2.98817892848929,3.22248052201467,4.56967115996909,4.32703618271888,7.23678683155428,6.25991989678515,5.02964923922999,6.65452821903147,8.08900410139945,5.96513418170043,7.94762934834669,0.906921534460845,3.99574716073316,4.48569283047379,2.18250001273302,1.73870634628971,0.750729901804728,1.64836461840539,0.643105137237198,4.01257683228291,4.51801474093653,3.22227665555024,4.01026859407578,4.1244763762485,3.42541259885321,4.5323633843382,4.72515750162264,4.95353323546643,5.89085131679466,6.73088405277366,4.15149390336707,4.38927360741134,4.26834014385335,2.18796045361465,2.72497111416377,2.5738091183002,2.22246727801615,1.64828045791115,1.28367683836726,2.52697211763797,1.77435509923168,3.39527414494937,2.1537546718073,3.58540853467268,3.61843454420364,4.76293691283074,3.82418275618023,2.89363830695558,4.53294490883637,2.50238164228475,2.74295401908332,3.19456451086807,3.09967046931517,2.0348498328526,2.1645157495526,2.03075058940024,2.74391959309159,2.63069711437843,3.39510284614654,1.12228454331548,3.55905054372522,3.94017929502254,0,4.02835787083512,2.50778594275484,2.49810577937946,2.57324769289949,2.57845264857958,2.29545998482612,1.98532277207564,2.08681052058379
|short_description=p2@Sp4
}}

Revision as of 22:31, 12 September 2013

Short description:p2@Sp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Sp4_5end
Coexpression cluster:MCL_coexpression_mm9:2774
Association with transcript: 0bp_to_ENSMUST00000026367, NM_001166385, NM_009239, uc007pif.2, uc011yvt.1_5end
EntrezGene:Sp4
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Sp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.75
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.31
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.76
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.76
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.86
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A512.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.95
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.12
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H25.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.72
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A117.14
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C37.28
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.40
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.52
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.36
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.50
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D91.59
Mouse Schwann, donor2.CNhs12573.11746-123F91.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H99.84
adrenal gland, adult.CNhs10508.49-24D72.82
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I27.75
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F114.95
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F23.74
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.74
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C93.96
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C66.87
eyeball, neonate N01.CNhs11140.1532-43E75.12
eyeball, neonate N02.CNhs11205.1551-44G85.06
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E26.47
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E33.50
heart, neonate N03.CNhs11221.1349-25I22.47
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D22.28
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G16.69
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D83.35
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G74.42
kidney, neonate N10.CNhs11206.758-6D52.59
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C52.55
lung, embryo E16.CNhs10998.458-17B62.58
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E63.03
lung, neonate N20.CNhs11109.822-18A43.44
lung, neonate N25.CNhs11119.1359-25C73.11
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C22.41
medulla oblongata, neonate N30.CNhs11200.1396-42A33.28
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E65.58
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F53.46
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H32.11
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G25.64
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D15.27
spleen, neonate N20.CNhs11112.824-19H16.83
spleen, neonate N25.CNhs11099.1354-25G35.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.39
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G83.05
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A92.40
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.30
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G54.47
testis, embryo E17.CNhs11029.486-18I52.97
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I44.69
testis, neonate N10.CNhs11204.763-44D94.93
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I22.47
thymus, embryo E16.CNhs11002.456-26C52.99
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G44.57
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C77.24
thymus, neonate N06.CNhs11197.681-26C46.26
thymus, neonate N07.CNhs11211.713-19D35.03
thymus, neonate N10.CNhs11194.748-24E46.65
thymus, neonate N20.CNhs11186.820-7A28.09
thymus, neonate N25.CNhs11125.1362-25G75.97
thymus, neonate N30.CNhs11132.1393-42G27.95
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.49
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I84.15
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H24.27
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.77e-0923
neuroblast (sensu Vertebrata)1.77e-0923

Uber anatomy
Ontology termp-valuen
neurectoderm1.14e-1364
neural plate1.14e-1364
presumptive neural plate1.14e-1364
regional part of nervous system5.96e-1354
neural tube2.37e-1252
neural rod2.37e-1252
future spinal cord2.37e-1252
neural keel2.37e-1252
pre-chordal neural plate3.52e-1249
gray matter1.45e-1134
brain3.82e-1147
future brain3.82e-1147
central nervous system1.23e-1073
regional part of brain1.38e-1046
anterior neural tube2.70e-1040
ecto-epithelium2.93e-1073
regional part of forebrain4.76e-1039
forebrain4.76e-1039
future forebrain4.76e-1039
nervous system5.22e-1075
brain grey matter8.01e-1029
regional part of telencephalon8.01e-1029
telencephalon8.01e-1029
ectoderm-derived structure4.98e-0895
ectoderm4.98e-0895
presumptive ectoderm4.98e-0895







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