FFCP PHASE1:Hg19::chr3:196731228..196731239,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4241|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7037|TSSclassifier=W|UniProt=|association_with_transcript=-178bp_to_ENST00000469783_5end|coexpression_cluster_id=C3|description=CAGE_peak_10_at_MFI2_5end|id=chr3:196731228..196731239,-|ontology_enrichment_celltype=CL:0002535!2.23e-11!2|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:4362!5.23e-10!5|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001950!1.53e-55!20;UBERON:0002619!2.00e-50!22;UBERON:0001869!2.20e-44!32;UBERON:0000956!3.16e-44!25;UBERON:0000203!3.16e-44!25;UBERON:0001893!1.25e-41!34;UBERON:0002791!7.33e-38!33;UBERON:0002020!1.12e-36!34;UBERON:0003528!1.12e-36!34;UBERON:0001049!1.27e-36!57;UBERON:0005068!1.27e-36!57;UBERON:0006241!1.27e-36!57;UBERON:0007135!1.27e-36!57;UBERON:0002616!3.03e-35!59;UBERON:0002780!4.72e-34!41;UBERON:0001890!4.72e-34!41;UBERON:0006240!4.72e-34!41;UBERON:0003080!3.59e-33!42;UBERON:0000200!2.68e-32!6;UBERON:0000955!4.45e-32!69;UBERON:0006238!4.45e-32!69;UBERON:0001017!8.53e-32!82;UBERON:0003075!1.79e-30!86;UBERON:0007284!1.79e-30!86;UBERON:0005743!4.14e-30!86;UBERON:0002346!6.69e-29!90;UBERON:0000073!7.97e-27!94;UBERON:0001016!7.97e-27!94;UBERON:0007023!6.25e-24!115;UBERON:0003056!7.84e-22!61;UBERON:0002021!4.78e-18!5;UBERON:0001871!1.43e-16!7;UBERON:0002771!1.45e-16!3;UBERON:0000033!4.21e-16!123;UBERON:0000153!3.85e-15!129;UBERON:0007811!3.85e-15!129;UBERON:0004121!3.82e-14!169;UBERON:0000924!1.06e-13!173;UBERON:0006601!1.06e-13!173;UBERON:0001870!1.73e-12!2;UBERON:0000064!4.94e-12!219;UBERON:0002360!2.01e-11!2;UBERON:0000094!2.01e-11!2;UBERON:0007645!2.01e-11!2;UBERON:0006955!2.23e-11!2;UBERON:0004801!2.23e-11!2;UBERON:0001872!1.62e-10!5;UBERON:0000025!1.35e-09!194;UBERON:0000002!2.04e-08!6;UBERON:0001560!2.04e-08!6;UBERON:0001896!1.02e-07!3;UBERON:0005290!1.02e-07!3;UBERON:0010096!1.02e-07!3;UBERON:0000483!1.19e-07!309;UBERON:0000119!1.60e-07!312;UBERON:0004733!4.46e-07!12;UBERON:0002028!4.46e-07!12;UBERON:0007277!4.46e-07!12;UBERON:0002702!4.58e-07!1;UBERON:0002902!4.85e-07!1;UBERON:0009899!4.85e-07!1;UBERON:0001882!5.13e-07!1;UBERON:0005403!5.13e-07!1;UBERON:0002022!5.75e-07!1;UBERON:0002581!6.08e-07!1;UBERON:0007190!6.80e-07!1;UBERON:0004111!8.63e-07!241|ontology_enrichment_uberon_v019=UBERON:0001870;5.04e-34;3!UBERON:0002021;4.66e-21;5!UBERON:0001950;4.86e-20;20!UBERON:0002619;2.02e-18;22!UBERON:0000956;1.86e-16;25!UBERON:0000203;1.86e-16;25!UBERON:0002791;1.84e-13;32!UBERON:0001869;1.84e-13;32!UBERON:0001893;1.84e-13;34!UBERON:0003528;1.77e-12;34!UBERON:0002020;1.77e-12;34!UBERON:0002780;1.64e-10;41!UBERON:0001890;1.64e-10;41|ontology_enrichment_uberon_v019_2=UBERON:0001870,5.96e-34,3;UBERON:0002021,4.21e-21,5;UBERON:0001950,4.86e-20,20;UBERON:0002619,2.02e-18,22;UBERON:0000956,1.86e-16,25;UBERON:0000203,1.86e-16,25;UBERON:0002791,2.96e-13,32;UBERON:0001869,2.96e-13,32;UBERON:0003528,1.42e-12,34;UBERON:0002020,1.42e-12,34;UBERON:0001893,1.42e-12,34;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,1.13959432720582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6682451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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4241 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7037 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-178bp_to_ENST00000469783_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_10_at_MFI2_5end | |||
|id=chr3:196731228..196731239,- | |||
|ontology_enrichment_celltype=CL:0002535!2.23e-11!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4362!5.23e-10!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!1.53e-55!20;UBERON:0002619!2.00e-50!22;UBERON:0001869!2.20e-44!32;UBERON:0000956!3.16e-44!25;UBERON:0000203!3.16e-44!25;UBERON:0001893!1.25e-41!34;UBERON:0002791!7.33e-38!33;UBERON:0002020!1.12e-36!34;UBERON:0003528!1.12e-36!34;UBERON:0001049!1.27e-36!57;UBERON:0005068!1.27e-36!57;UBERON:0006241!1.27e-36!57;UBERON:0007135!1.27e-36!57;UBERON:0002616!3.03e-35!59;UBERON:0002780!4.72e-34!41;UBERON:0001890!4.72e-34!41;UBERON:0006240!4.72e-34!41;UBERON:0003080!3.59e-33!42;UBERON:0000200!2.68e-32!6;UBERON:0000955!4.45e-32!69;UBERON:0006238!4.45e-32!69;UBERON:0001017!8.53e-32!82;UBERON:0003075!1.79e-30!86;UBERON:0007284!1.79e-30!86;UBERON:0005743!4.14e-30!86;UBERON:0002346!6.69e-29!90;UBERON:0000073!7.97e-27!94;UBERON:0001016!7.97e-27!94;UBERON:0007023!6.25e-24!115;UBERON:0003056!7.84e-22!61;UBERON:0002021!4.78e-18!5;UBERON:0001871!1.43e-16!7;UBERON:0002771!1.45e-16!3;UBERON:0000033!4.21e-16!123;UBERON:0000153!3.85e-15!129;UBERON:0007811!3.85e-15!129;UBERON:0004121!3.82e-14!169;UBERON:0000924!1.06e-13!173;UBERON:0006601!1.06e-13!173;UBERON:0001870!1.73e-12!2;UBERON:0000064!4.94e-12!219;UBERON:0002360!2.01e-11!2;UBERON:0000094!2.01e-11!2;UBERON:0007645!2.01e-11!2;UBERON:0006955!2.23e-11!2;UBERON:0004801!2.23e-11!2;UBERON:0001872!1.62e-10!5;UBERON:0000025!1.35e-09!194;UBERON:0000002!2.04e-08!6;UBERON:0001560!2.04e-08!6;UBERON:0001896!1.02e-07!3;UBERON:0005290!1.02e-07!3;UBERON:0010096!1.02e-07!3;UBERON:0000483!1.19e-07!309;UBERON:0000119!1.60e-07!312;UBERON:0004733!4.46e-07!12;UBERON:0002028!4.46e-07!12;UBERON:0007277!4.46e-07!12;UBERON:0002702!4.58e-07!1;UBERON:0002902!4.85e-07!1;UBERON:0009899!4.85e-07!1;UBERON:0001882!5.13e-07!1;UBERON:0005403!5.13e-07!1;UBERON:0002022!5.75e-07!1;UBERON:0002581!6.08e-07!1;UBERON:0007190!6.80e-07!1;UBERON:0004111!8.63e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001870;5.04e-34;3!UBERON:0002021;4.66e-21;5!UBERON:0001950;4.86e-20;20!UBERON:0002619;2.02e-18;22!UBERON:0000956;1.86e-16;25!UBERON:0000203;1.86e-16;25!UBERON:0002791;1.84e-13;32!UBERON:0001869;1.84e-13;32!UBERON:0001893;1.84e-13;34!UBERON:0003528;1.77e-12;34!UBERON:0002020;1.77e-12;34!UBERON:0002780;1.64e-10;41!UBERON:0001890;1.64e-10;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001870,5.96e-34,3;UBERON:0002021,4.21e-21,5;UBERON:0001950,4.86e-20,20;UBERON:0002619,2.02e-18,22;UBERON:0000956,1.86e-16,25;UBERON:0000203,1.86e-16,25;UBERON:0002791,2.96e-13,32;UBERON:0001869,2.96e-13,32;UBERON:0003528,1.42e-12,34;UBERON:0002020,1.42e-12,34;UBERON:0001893,1.42e-12,34;UBERON:0002780,1.07e-10,41;UBERON:0001890,1.07e-10,41;UBERON:0003080,1.07e-10,41;UBERON:0006240,1.07e-10,41;UBERON:0000073,1.34e-08,53;UBERON:0002616,1.34e-08,53;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56;UBERON:0003056,1.20e-07,61;UBERON:0000955,6.59e-07,68;UBERON:0006238,6.59e-07,68 | |||
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|short_description=p10@MFI2 | |||
}} |
Revision as of 23:35, 12 September 2013
Short description: | p10@MFI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_MFI2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -178bp_to_ENST00000469783_5end |
EntrezGene: | MFI2 |
HGNC: | 7037 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
frontal cortex | 5.96e-34 | 3 |
occipital lobe | 4.21e-21 | 5 |
neocortex | 4.86e-20 | 20 |
regional part of cerebral cortex | 2.02e-18 | 22 |
cerebral cortex | 1.86e-16 | 25 |
pallium | 1.86e-16 | 25 |
regional part of telencephalon | 2.96e-13 | 32 |
cerebral hemisphere | 2.96e-13 | 32 |
brain grey matter | 1.42e-12 | 34 |
gray matter | 1.42e-12 | 34 |
telencephalon | 1.42e-12 | 34 |
regional part of forebrain | 1.07e-10 | 41 |
forebrain | 1.07e-10 | 41 |
anterior neural tube | 1.07e-10 | 41 |
future forebrain | 1.07e-10 | 41 |
regional part of nervous system | 1.34e-08 | 53 |
regional part of brain | 1.34e-08 | 53 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |
pre-chordal neural plate | 1.20e-07 | 61 |
brain | 6.59e-07 | 68 |
future brain | 6.59e-07 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.