FFCP PHASE1:Mm9::chr13:43880537..43880572,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=12522|HGNC=|MCL_coexpression_id=48|UniProt=Q3T9H6|association_with_transcript=0bp_to_ENSMUST00000168861,uc007qgj.1_5end|description=CAGE_peak_1_at_Cd83_5end|id=chr13:43880537..43880572,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.13e-15!48;UBERON:0002390!4.70e-14!45;UBERON:0003061!4.70e-14!45;UBERON:0002405!6.04e-09!70;UBERON:0004177!2.52e-08!29;UBERON:0001474!5.68e-07!22;UBERON:0004765!5.68e-07!22;UBERON:0001434!5.68e-07!22;UBERON:0002371!8.42e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.09e-16,48;UBERON:0002405,6.09e-16,48;UBERON:0002390,2.59e-14,45;UBERON:0003061,2.59e-14,45;UBERON:0004177,1.52e-08,29;UBERON:0005057,1.52e-08,29;UBERON:0000077,4.11e-08,35;UBERON:0001474,5.50e-07,22;UBERON:0004765,5.50e-07,22;UBERON:0001434,5.50e-07,22;UBERON:0003408,7.52e-07,24;UBERON:0002371,8.14e-07,16|phase1_expression=5.76535849577258,1.04692622291808,0.454999239389536,5.74682001482977,5.50985302940982,3.18970616632591,4.20502753071946,62.1083185753982,102.775767170717,80.0500680021218,37.8391709778366,32.7065851880879,2.05440875917447,1.57356724354195,42.3049397505892,38.8752513388466,16.0899231969474,259.152168841792,225.827472148652,294.102028696035,6.37824676133023,0.397163804803541,0.522399578277871,35.8383027057231,29.8232065387321,0,3.87685796543167,1.939241094173,2.47030445293286,1.76421090831952,0.221730510655305,0,0,15.8481681015439,6.35473563452804,2.49351968037739,2.6542016314108,0,1.5626706890476,0,2.35292595212406,0.683045484958446,1.45653105909346,0,0.202753862439029,0,1.56478268869608,0,0,0.194429899074283,0.139986421625363,0,624.151294534779,44.9724528047034,13.1076581665561,0.514518872071894,1.71920063963254,1.03134418455488,1.82084814773638,3.1739458756322,2.53532561402472,0,0,47.2447351572734,49.4433181283487,48.3126478163348,23.0692085099172,8.83702102239575,1.03689612308478,0.810035629990144,1.26194976810829,12.8542942981712,13.9147180799517,0.61245399607477,0.766763768145891,0,30.8324466798288,20.42997409363,22.2729473221553,1.84640802822271,2.28719109006024,0.52091337055676,25.4056529091257,27.5753678915523,16.3494125121187,8.54422897873636,10.8202477407318,3.91438836233131,0.757261933331841,0.0755715601067855,8.40607017234866,9.46466264679525,0,0,0.649776417447669,1.34408066129201,7.5839986871146,0,0,0,4.22530259330042,0,0,0,0.432982082022428,0,0,10.9616524530298,141.89796023865,9.79718117827843,1.90833859442749,2.74018930480927,1.84492397804847,3.46662073271032,2.70454026412121,4.39833069653864,3.46072954828123,6.94076913215576,14.153768831198,3.558870698843,4.85851340612866,7.75800405016355,13.0474232852686,5.85561594023094,5.23616767033638,5.62005521458901,56.1932933932766,13.197860081855,22.6185004190055,31.1564529962031,6.40500843946077,1.50785222535437,5.9100268865374,4.09144731728529,19.9476522777178,11.356888414743,7.43427356107309,7.58882520721567,2.0217820674694,4.41927897361595,2.86264974517948,2.06911893990126,1.44049703844279,1.9591626318643,1.7009124787832,1.5373646434182,1.12442069471675,2.06962696591213,1.5089759505299,1.70195472151037,4.75068035242662,2.6303487891309,3.61461423993277,1.74126083261083,2.67516777330327,5.7719937377363,4.21327912387941,2.31613116403244,3.40996199274711,0.828503090142008,1.17263029990548,1.62055855314913,1.42046841351126,1.77087808572663,2.00547246753592,1.62773761325285,1.60964040839772,1.98501082024188,1.48103864922132,5.25335885053105,6.32336714457675,6.14039947186396,8.78200461164202,7.38135303182045,3.36463917702604,1.13195073617213,2.64335026387038,3.17340679996253,2.13288250535234,2.78684006232526,2.06187938115349,2.8235693447268,3.33567065767305,3.61428689613862,3.79623249235609,3.78807595865225,5.02670417600539,4.97391180102877,4.874102177978,8.08937467788799,9.07779809473716,7.16908583715722,11.569741958138,9.36837803399776,10.1436962105772,7.53509913027663,11.0552917685547,11.3620028222316,11.4458132194906,2.95220295959204,3.61097074035162,3.20832626196681,3.26097889795864,0.166845105716094,0.786235980452812,0.674586337154561,0.202860121388503,1.4470629585145,2.29163266603278,4.89083433666378,1.78348749452539,3.56929837144506,5.75072826109418,6.32639611036456,5.30464044294753,5.80931419278357,2.15276896226295,8.68398338454061,18.2905658264939,2.4633883530163,3.91115943460862,4.41337223015489,2.34690248288502,6.19773152534718,5.71304738126433,7.80534591431195,8.03939234941574,8.19419351700467,10.6834695000516,15.0754249538479,16.0597033135283,11.4272756279394,66.3481649332798,25.0196614556606,9.34352118736169,7.72622889653251,33.3945227174607,24.9660892441393,0,3.7870639080656,5.04813151066011,3.12350995437311,0.861693590931196,0.238968797952552,0.222798674082394,0.849229592366497,1.21443210502468,1.16902343164525,3.55759000151871,3.21321316421807,6.81312408999689,11.3961986347043,11.2392001953967,10.7230579932148,5.30980553359851,1.45668381692989,1.51161778482376,2.26326095707078,2.95301892880773,2.15204603560749,3.87642439752332,2.18120237686503,2.49548164869305,7.26884543252377,5.27093042874994,1.03135543248187,1.70219802876894,5.221771726908,5.30370603509293,4.71541477069503,2.30542303734956,1.07021290561242,1.81003922662333,1.8267896946876,4.92810586933792,33.6812992673474,0.882113592219848,7.09010887648364,2.74489525383039,1.99032652262914,2.38744688006273,1.96969079694074,6.70405924248657,38.0121869121545,46.9894922194095,7.63631411463923,5.92622487583077,13.9392658183471,34.8570280688614,52.1614234910872,199.214719952798,133.093831159799,163.766968958242,3.81868247206045,1.10717597753397,3.45643094115643,2.91614420218863,1.67270636811575,1.31017538247707,1.61837215661785,4.29797969771747,3.14107130380836,7.64728342421578,16.1548221402601,0.56369293868419,0.149516546043979,1.48912641411388,0.777804753376191,1.16243841129958,1.520605129417,1.99507305697782,1.3020438484395,0.838874755405687,0.724752362478018,1.15212002503146,80.8988468808136,26.9624536335918,46.3226416813371,49.4998335545399,36.8794993075012,41.7230845040656,56.0110794763055,51.1005764024037,50.2812920741775,49.6868379390599,52.6312686414308,80.2078358488162,69.7535851892389,67.2042187544021,1.36038230169127,1.55390167361845,1.52513556236109,3.02192309455341,4.63655025677257,7.88266396894964,10.2564909589668,3.21552568618599,2.00628841614145,1.12950368523413,3.22227665555024,4.58316410751517,3.60891682921744,4.7955776383945,6.0431511791176,2.02506750069542,2.2516060161211,2.71885445390523,5.1776031175182,1.24544817101012,2.39414924040619,2.56100408631201,1.45864030240976,2.09613162627982,2.94149613520023,3.11145418922261,2.88449080134452,2.24643446714271,4.04315538822076,2.28131369901216,2.45214243801899,2.90288673156635,3.52138338226781,2.92920891673628,4.76293691283074,2.66533949673168,4.62982129112892,2.06042950401653,2.94397840268795,4.80016953339582,1.24233064311536,2.38436189947321,2.61623549938191,2.25862512996793,3.38458431566706,2.37806364734604,3.15683653725411,2.58027816307137,5.05028044491965,2.72860541685601,3.54616136552028,4.91077251803627,5.73266312388074,3.2794123866794,2.24829520144151,3.74290573512653,3.43793686477277,2.10417165275728,5.07360263974886,8.11537424671475|short_description=p1@Cd83}} | ||
|EntrezGene=12522 | |||
|HGNC= | |||
|MCL_coexpression_id=48 | |||
|UniProt=Q3T9H6 | |||
|association_with_transcript=0bp_to_ENSMUST00000168861,uc007qgj.1_5end | |||
|description=CAGE_peak_1_at_Cd83_5end | |||
|id=chr13:43880537..43880572,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.13e-15!48;UBERON:0002390!4.70e-14!45;UBERON:0003061!4.70e-14!45;UBERON:0002405!6.04e-09!70;UBERON:0004177!2.52e-08!29;UBERON:0001474!5.68e-07!22;UBERON:0004765!5.68e-07!22;UBERON:0001434!5.68e-07!22;UBERON:0002371!8.42e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.09e-16,48;UBERON:0002405,6.09e-16,48;UBERON:0002390,2.59e-14,45;UBERON:0003061,2.59e-14,45;UBERON:0004177,1.52e-08,29;UBERON:0005057,1.52e-08,29;UBERON:0000077,4.11e-08,35;UBERON:0001474,5.50e-07,22;UBERON:0004765,5.50e-07,22;UBERON:0001434,5.50e-07,22;UBERON:0003408,7.52e-07,24;UBERON:0002371,8.14e-07,16 | |||
|phase1_expression=5.76535849577258,1.04692622291808,0.454999239389536,5.74682001482977,5.50985302940982,3.18970616632591,4.20502753071946,62.1083185753982,102.775767170717,80.0500680021218,37.8391709778366,32.7065851880879,2.05440875917447,1.57356724354195,42.3049397505892,38.8752513388466,16.0899231969474,259.152168841792,225.827472148652,294.102028696035,6.37824676133023,0.397163804803541,0.522399578277871,35.8383027057231,29.8232065387321,0,3.87685796543167,1.939241094173,2.47030445293286,1.76421090831952,0.221730510655305,0,0,15.8481681015439,6.35473563452804,2.49351968037739,2.6542016314108,0,1.5626706890476,0,2.35292595212406,0.683045484958446,1.45653105909346,0,0.202753862439029,0,1.56478268869608,0,0,0.194429899074283,0.139986421625363,0,624.151294534779,44.9724528047034,13.1076581665561,0.514518872071894,1.71920063963254,1.03134418455488,1.82084814773638,3.1739458756322,2.53532561402472,0,0,47.2447351572734,49.4433181283487,48.3126478163348,23.0692085099172,8.83702102239575,1.03689612308478,0.810035629990144,1.26194976810829,12.8542942981712,13.9147180799517,0.61245399607477,0.766763768145891,0,30.8324466798288,20.42997409363,22.2729473221553,1.84640802822271,2.28719109006024,0.52091337055676,25.4056529091257,27.5753678915523,16.3494125121187,8.54422897873636,10.8202477407318,3.91438836233131,0.757261933331841,0.0755715601067855,8.40607017234866,9.46466264679525,0,0,0.649776417447669,1.34408066129201,7.5839986871146,0,0,0,4.22530259330042,0,0,0,0.432982082022428,0,0,10.9616524530298,141.89796023865,9.79718117827843,1.90833859442749,2.74018930480927,1.84492397804847,3.46662073271032,2.70454026412121,4.39833069653864,3.46072954828123,6.94076913215576,14.153768831198,3.558870698843,4.85851340612866,7.75800405016355,13.0474232852686,5.85561594023094,5.23616767033638,5.62005521458901,56.1932933932766,13.197860081855,22.6185004190055,31.1564529962031,6.40500843946077,1.50785222535437,5.9100268865374,4.09144731728529,19.9476522777178,11.356888414743,7.43427356107309,7.58882520721567,2.0217820674694,4.41927897361595,2.86264974517948,2.06911893990126,1.44049703844279,1.9591626318643,1.7009124787832,1.5373646434182,1.12442069471675,2.06962696591213,1.5089759505299,1.70195472151037,4.75068035242662,2.6303487891309,3.61461423993277,1.74126083261083,2.67516777330327,5.7719937377363,4.21327912387941,2.31613116403244,3.40996199274711,0.828503090142008,1.17263029990548,1.62055855314913,1.42046841351126,1.77087808572663,2.00547246753592,1.62773761325285,1.60964040839772,1.98501082024188,1.48103864922132,5.25335885053105,6.32336714457675,6.14039947186396,8.78200461164202,7.38135303182045,3.36463917702604,1.13195073617213,2.64335026387038,3.17340679996253,2.13288250535234,2.78684006232526,2.06187938115349,2.8235693447268,3.33567065767305,3.61428689613862,3.79623249235609,3.78807595865225,5.02670417600539,4.97391180102877,4.874102177978,8.08937467788799,9.07779809473716,7.16908583715722,11.569741958138,9.36837803399776,10.1436962105772,7.53509913027663,11.0552917685547,11.3620028222316,11.4458132194906,2.95220295959204,3.61097074035162,3.20832626196681,3.26097889795864,0.166845105716094,0.786235980452812,0.674586337154561,0.202860121388503,1.4470629585145,2.29163266603278,4.89083433666378,1.78348749452539,3.56929837144506,5.75072826109418,6.32639611036456,5.30464044294753,5.80931419278357,2.15276896226295,8.68398338454061,18.2905658264939,2.4633883530163,3.91115943460862,4.41337223015489,2.34690248288502,6.19773152534718,5.71304738126433,7.80534591431195,8.03939234941574,8.19419351700467,10.6834695000516,15.0754249538479,16.0597033135283,11.4272756279394,66.3481649332798,25.0196614556606,9.34352118736169,7.72622889653251,33.3945227174607,24.9660892441393,0,3.7870639080656,5.04813151066011,3.12350995437311,0.861693590931196,0.238968797952552,0.222798674082394,0.849229592366497,1.21443210502468,1.16902343164525,3.55759000151871,3.21321316421807,6.81312408999689,11.3961986347043,11.2392001953967,10.7230579932148,5.30980553359851,1.45668381692989,1.51161778482376,2.26326095707078,2.95301892880773,2.15204603560749,3.87642439752332,2.18120237686503,2.49548164869305,7.26884543252377,5.27093042874994,1.03135543248187,1.70219802876894,5.221771726908,5.30370603509293,4.71541477069503,2.30542303734956,1.07021290561242,1.81003922662333,1.8267896946876,4.92810586933792,33.6812992673474,0.882113592219848,7.09010887648364,2.74489525383039,1.99032652262914,2.38744688006273,1.96969079694074,6.70405924248657,38.0121869121545,46.9894922194095,7.63631411463923,5.92622487583077,13.9392658183471,34.8570280688614,52.1614234910872,199.214719952798,133.093831159799,163.766968958242,3.81868247206045,1.10717597753397,3.45643094115643,2.91614420218863,1.67270636811575,1.31017538247707,1.61837215661785,4.29797969771747,3.14107130380836,7.64728342421578,16.1548221402601,0.56369293868419,0.149516546043979,1.48912641411388,0.777804753376191,1.16243841129958,1.520605129417,1.99507305697782,1.3020438484395,0.838874755405687,0.724752362478018,1.15212002503146,80.8988468808136,26.9624536335918,46.3226416813371,49.4998335545399,36.8794993075012,41.7230845040656,56.0110794763055,51.1005764024037,50.2812920741775,49.6868379390599,52.6312686414308,80.2078358488162,69.7535851892389,67.2042187544021,1.36038230169127,1.55390167361845,1.52513556236109,3.02192309455341,4.63655025677257,7.88266396894964,10.2564909589668,3.21552568618599,2.00628841614145,1.12950368523413,3.22227665555024,4.58316410751517,3.60891682921744,4.7955776383945,6.0431511791176,2.02506750069542,2.2516060161211,2.71885445390523,5.1776031175182,1.24544817101012,2.39414924040619,2.56100408631201,1.45864030240976,2.09613162627982,2.94149613520023,3.11145418922261,2.88449080134452,2.24643446714271,4.04315538822076,2.28131369901216,2.45214243801899,2.90288673156635,3.52138338226781,2.92920891673628,4.76293691283074,2.66533949673168,4.62982129112892,2.06042950401653,2.94397840268795,4.80016953339582,1.24233064311536,2.38436189947321,2.61623549938191,2.25862512996793,3.38458431566706,2.37806364734604,3.15683653725411,2.58027816307137,5.05028044491965,2.72860541685601,3.54616136552028,4.91077251803627,5.73266312388074,3.2794123866794,2.24829520144151,3.74290573512653,3.43793686477277,2.10417165275728,5.07360263974886,8.11537424671475 | |||
|short_description=p1@Cd83 | |||
}} |
Revision as of 00:35, 13 September 2013
Short description: | p1@Cd83 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cd83_5end |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | 0bp_to_ENSMUST00000168861, uc007qgj.1_5end |
EntrezGene: | Cd83 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.09e-16 | 48 |
immune system | 6.09e-16 | 48 |
hematopoietic system | 2.59e-14 | 45 |
blood island | 2.59e-14 | 45 |
hemopoietic organ | 1.52e-08 | 29 |
immune organ | 1.52e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 4.11e-08 | 35 |
bone element | 5.50e-07 | 22 |
skeletal element | 5.50e-07 | 22 |
skeletal system | 5.50e-07 | 22 |
gland of gut | 7.52e-07 | 24 |
bone marrow | 8.14e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.