FFCP PHASE1:Hg19::chr4:143522258..143522278,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C245|description=CAGE_peak_at_chr4:143522258..143522278,-|id=chr4:143522258..143522278,-|ontology_enrichment_celltype=CL:0002541!7.67e-11!3;CL:0002574!1.91e-08!1|ontology_enrichment_celltype_v019=CL:0002327;7.14e-26;4|ontology_enrichment_celltype_v019_2=CL:0002327,7.14e-26,4|ontology_enrichment_development_v019=UBERON:0008425;2.55e-98;1!UBERON:0009847;4.27e-34;3!UBERON:0003353;4.27e-34;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5093;7.14e-26;4!DOID:1612;7.14e-26;4|ontology_enrichment_disease_v019_2=DOID:5093,7.14e-26,4;DOID:1612,7.14e-26,4|ontology_enrichment_uberon=UBERON:0003127!5.02e-16!2;UBERON:0000476!7.67e-11!3;UBERON:0000920!7.67e-11!3;UBERON:0002372!9.74e-09!1;UBERON:0001961!9.74e-09!1;UBERON:0001744!9.74e-09!1;UBERON:0001735!9.74e-09!1;UBERON:0002367!9.15e-07!11;UBERON:0010147!9.15e-07!11;UBERON:0009846!9.15e-07!11;UBERON:0003353!9.15e-07!11;UBERON:0004902!9.15e-07!11;UBERON:0003820!9.15e-07!11;UBERON:0009847!9.15e-07!11|ontology_enrichment_uberon_v019=UBERON:0001911;7.14e-26;4!UBERON:0000310;3.02e-11;10!UBERON:0002367;2.16e-10;11!UBERON:0010147;2.16e-10;11!UBERON:0001443;2.37e-10;11!UBERON:0003937;1.22e-09;12!UBERON:0005399;1.22e-09;12|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.14e-26,4;UBERON:0005333,7.14e-26,4;UBERON:0008425,7.14e-26,4;UBERON:0005311,7.14e-26,4;UBERON:0000076,1.07e-13,8;UBERON:0005153,5.76e-12,37;UBERON:0000310,3.02e-11,10;UBERON:0002367,2.16e-10,11;UBERON:0010147,2.16e-10,11;UBERON:0009846,2.16e-10,11;UBERON:0003353,2.16e-10,11;UBERON:0004902,2.16e-10,11;UBERON:0003820,2.16e-10,11;UBERON:0009847,2.16e-10,11;UBERON:0001443,2.37e-10,11;UBERON:0005157,1.08e-09,47;UBERON:0003937,1.22e-09,12;UBERON:0005399,1.22e-09,12;UBERON:0000162,1.86e-08,14;UBERON:0001353,1.86e-08,14;UBERON:0000163,1.86e-08,14;UBERON:0006866,1.86e-08,14;UBERON:0000164,1.86e-08,14;UBERON:0000931,1.86e-08,14;UBERON:0004122,5.55e-08,15;UBERON:0002530,5.66e-08,59|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.667388411352415,3.53218917827313,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.202056159043763,0.215166616178029,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0,0|short_description=p@chr4:143522258..143522278,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C245 | |||
|description=CAGE_peak_at_chr4:143522258..143522278,- | |||
|id=chr4:143522258..143522278,- | |||
|ontology_enrichment_celltype=CL:0002541!7.67e-11!3;CL:0002574!1.91e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0002327;7.14e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,7.14e-26,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.55e-98;1!UBERON:0009847;4.27e-34;3!UBERON:0003353;4.27e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;7.14e-26;4!DOID:1612;7.14e-26;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.14e-26,4;DOID:1612,7.14e-26,4 | |||
|ontology_enrichment_uberon=UBERON:0003127!5.02e-16!2;UBERON:0000476!7.67e-11!3;UBERON:0000920!7.67e-11!3;UBERON:0002372!9.74e-09!1;UBERON:0001961!9.74e-09!1;UBERON:0001744!9.74e-09!1;UBERON:0001735!9.74e-09!1;UBERON:0002367!9.15e-07!11;UBERON:0010147!9.15e-07!11;UBERON:0009846!9.15e-07!11;UBERON:0003353!9.15e-07!11;UBERON:0004902!9.15e-07!11;UBERON:0003820!9.15e-07!11;UBERON:0009847!9.15e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;7.14e-26;4!UBERON:0000310;3.02e-11;10!UBERON:0002367;2.16e-10;11!UBERON:0010147;2.16e-10;11!UBERON:0001443;2.37e-10;11!UBERON:0003937;1.22e-09;12!UBERON:0005399;1.22e-09;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,7.14e-26,4;UBERON:0005333,7.14e-26,4;UBERON:0008425,7.14e-26,4;UBERON:0005311,7.14e-26,4;UBERON:0000076,1.07e-13,8;UBERON:0005153,5.76e-12,37;UBERON:0000310,3.02e-11,10;UBERON:0002367,2.16e-10,11;UBERON:0010147,2.16e-10,11;UBERON:0009846,2.16e-10,11;UBERON:0003353,2.16e-10,11;UBERON:0004902,2.16e-10,11;UBERON:0003820,2.16e-10,11;UBERON:0009847,2.16e-10,11;UBERON:0001443,2.37e-10,11;UBERON:0005157,1.08e-09,47;UBERON:0003937,1.22e-09,12;UBERON:0005399,1.22e-09,12;UBERON:0000162,1.86e-08,14;UBERON:0001353,1.86e-08,14;UBERON:0000163,1.86e-08,14;UBERON:0006866,1.86e-08,14;UBERON:0000164,1.86e-08,14;UBERON:0000931,1.86e-08,14;UBERON:0004122,5.55e-08,15;UBERON:0002530,5.66e-08,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.667388411352415,3.53218917827313,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.202056159043763,0.215166616178029,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr4:143522258..143522278,- | |||
}} |
Revision as of 02:35, 13 September 2013
Short description: | p@chr4:143522258..143522278, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:143522258..143522278, - |
Coexpression cluster: | C245_prostate_penis_salivary_esophagus_kidney_Neutrophils_Pancreatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 7.14e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 7.14e-26 | 4 |
mammary bud | 7.14e-26 | 4 |
mammary ridge | 7.14e-26 | 4 |
mammary placode | 7.14e-26 | 4 |
external ectoderm | 1.07e-13 | 8 |
epithelial bud | 5.76e-12 | 37 |
breast | 3.02e-11 | 10 |
prostate gland | 2.16e-10 | 11 |
male accessory sex gland | 2.16e-10 | 11 |
embryonic cloacal epithelium | 2.16e-10 | 11 |
epithelium of hindgut | 2.16e-10 | 11 |
urogenital sinus epithelium | 2.16e-10 | 11 |
prostate bud | 2.16e-10 | 11 |
prostate field | 2.16e-10 | 11 |
chest | 2.37e-10 | 11 |
epithelial fold | 1.08e-09 | 47 |
sex gland | 1.22e-09 | 12 |
male reproductive gland | 1.22e-09 | 12 |
cloaca | 1.86e-08 | 14 |
anal region | 1.86e-08 | 14 |
embryonic cloaca | 1.86e-08 | 14 |
terminal part of digestive tract | 1.86e-08 | 14 |
primitive urogenital sinus | 1.86e-08 | 14 |
proctodeum | 1.86e-08 | 14 |
genitourinary system | 5.55e-08 | 15 |
gland | 5.66e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.14e-26 | 4 |
breast cancer | 7.14e-26 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.