FFCP PHASE1:Mm9::chr14:59984271..59984298,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=219132|HGNC=|MCL_coexpression_id=86|UniProt=A6H5X4|association_with_transcript=0bp_to_ENSMUST00000160425,ENSMUST00000161754_5end|description=CAGE_peak_1_at_D14Ertd668e_5end|id=chr14:59984271..59984298,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!2.63e-13!193;UBERON:0004120!2.63e-13!193;UBERON:0006603!2.63e-13!193;UBERON:0003104!9.01e-12!131;UBERON:0009142!9.01e-12!131;UBERON:0004119!1.95e-10!130;UBERON:0000925!1.95e-10!130;UBERON:0006595!1.95e-10!130;UBERON:0004921!3.83e-10!126;UBERON:0004185!3.83e-10!126;UBERON:0000077!3.84e-10!97;UBERON:0001007!8.37e-10!128;UBERON:0001555!8.37e-10!128;UBERON:0007026!8.37e-10!128;UBERON:0001041!1.17e-08!92;UBERON:0002100!1.34e-07!98;UBERON:0004872!2.50e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.07e-09,90;UBERON:0004119,3.31e-08,118;UBERON:0000925,3.31e-08,118;UBERON:0006595,3.31e-08,118;UBERON:0004921,5.07e-08,114;UBERON:0001007,1.25e-07,116;UBERON:0001555,1.25e-07,116;UBERON:0007026,1.25e-07,116;UBERON:0005177,2.33e-07,79;UBERON:0004872,2.72e-07,33;UBERON:0001041,3.40e-07,80|phase1_expression=0.160148847104794,3.14077866875425,1.81999695755814,2.11724947914781,1.00179145989269,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,2.99798785634096,2.02475267389826,1.39912375625629,2.36596624018678,1.7824876368746,0.42438965179803,9.43980520676875,0,0,1.43993180514066,0.45881856213434,1.14846392823004,1.7230479846363,1.29282739611533,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,1.1554064790051,1.32987716286794,1.83752420636132,0.837063261473815,0.7813353445238,1.0470474879476,0,3.41522742479223,6.311634589405,11.9601977076798,14.9024088892686,6.60768307782054,4.69434806608824,0.218025156380447,0,0,1.95980990275508,0,0.335565212115473,0,0,19.551717138732,18.0516067161417,33.5186859980338,0,0,0,0,2.66788438833342,3.5995988691256,6.92206453796882,5.6838409195688,2.09720077362883,0.384218305321555,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0.614426133024974,0,0,0,0.558365998002762,1.12552522006336,0.61119299110724,0,0.284743361598206,0.186399445825301,4.46784540665786,2.79614772395106,50.7262855227936,28.3939879403858,2.03991400112325,0.539703191637817,3.89865850468601,0.896053774194671,4.77511028447956,5.79463096765396,4.67614808285164,2.82671659608272,0,8.98285341900225,0,7.11066703153331,7.36069539438128,6.58735650235256,4.04419556011827,7.19358442230078,14.2415836005944,9.20341262201914,0.346970653532272,1.52232739156071,0.230615497256059,5.57673770044703,4.8211369925639,7.28866229712118,11.8653584512499,20.5331086826275,5.30766331169925,3.558870698843,4.41683036920787,4.363877278217,7.45567044872489,0.292780797011547,0.209446706813455,6.13096932500619,0.359445373517761,0,0.254140454146129,1.19832511523858,0.457500602818626,0,1.04294592115366,1.27857728665165,1.0389402227978,0.486723789203273,3.05518091550949,5.349499736234,7.83440551144392,9.46988351489133,0,0,0.540186389416048,0,0.748401490664606,1.40925092313335,0.843315521037559,3.62184719034622,0,0,0,0.43839146485515,0.556094498451196,2.089512999133,3.49829631893504,0.59710280045548,0,0,0.284163499395593,0,0.469052119962192,0.720248245844059,0.473489471170421,1.37734962223183,1.3884040159864,1.62773761325285,5.09719462659276,8.4071046504362,6.41783414662574,11.1633875573785,14.8355921468916,16.6667985664879,31.8347667172023,21.6072334204199,0.841159794256509,0.102904612379284,2.97376904685418,14.8092317331585,0.426576501070468,0.464473343720877,0.515469845288373,1.61346819698674,1.55664630691409,4.37518940058886,6.64340686162316,2.63518327558417,6.53471542880701,7.36138946552258,2.9244613067868,10.7858329038507,6.48414149624083,6.37252074413975,0,0.342745537829186,0,0.610953983535943,3.10323979468201,1.33258057791605,3.22506339333712,10.1851002105925,13.9728867778824,5.79966670432462,4.44678940630723,0.166845105716094,0.589676985339609,1.57403478669398,0.811440485554012,1.20588579876208,0.763877555344259,5.75392274901621,7.13394997810156,8.78596522201861,10.0637744569148,13.7692150637346,10.9213185590096,5.80931419278357,7.89348619496414,4.3419916922703,38.4286635546538,0,0.162964976442026,0.848725428875941,0.234690248288502,2.84760637651087,15.9489239393629,7.80534591431195,12.7684466726015,18.6030339304971,10.8429242687091,27.8567635016755,33.6735714638496,24.7349890174385,69.3639906120652,188.191366601274,11.8023425524569,16.5562047782839,1.12385412991454,0.586058432961016,2.95082901678016,8.07906967053994,0,0.390438744296638,0,0,0,0,0,0,0,0.963963949265421,10.5035663054119,1.6025904330053,1.62886959353576,21.9410263553472,3.98235415019888,0.971122544619926,0.604647113929502,1.69744571780308,1.18120757152309,9.83792473420568,12.9214146584111,9.81541069589265,8.91243445961803,6.32073515871632,7.37930260024991,8.25084345985495,2.38307724027652,0.36012218806262,0.129358683782755,0,0.354680467284547,1.07021290561242,0.329098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| ||
|EntrezGene=219132 | |||
|HGNC= | |||
|MCL_coexpression_id=86 | |||
|UniProt=A6H5X4 | |||
|association_with_transcript=0bp_to_ENSMUST00000160425,ENSMUST00000161754_5end | |||
|description=CAGE_peak_1_at_D14Ertd668e_5end | |||
|id=chr14:59984271..59984298,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.63e-13!193;UBERON:0004120!2.63e-13!193;UBERON:0006603!2.63e-13!193;UBERON:0003104!9.01e-12!131;UBERON:0009142!9.01e-12!131;UBERON:0004119!1.95e-10!130;UBERON:0000925!1.95e-10!130;UBERON:0006595!1.95e-10!130;UBERON:0004921!3.83e-10!126;UBERON:0004185!3.83e-10!126;UBERON:0000077!3.84e-10!97;UBERON:0001007!8.37e-10!128;UBERON:0001555!8.37e-10!128;UBERON:0007026!8.37e-10!128;UBERON:0001041!1.17e-08!92;UBERON:0002100!1.34e-07!98;UBERON:0004872!2.50e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,3.07e-09,90;UBERON:0004119,3.31e-08,118;UBERON:0000925,3.31e-08,118;UBERON:0006595,3.31e-08,118;UBERON:0004921,5.07e-08,114;UBERON:0001007,1.25e-07,116;UBERON:0001555,1.25e-07,116;UBERON:0007026,1.25e-07,116;UBERON:0005177,2.33e-07,79;UBERON:0004872,2.72e-07,33;UBERON:0001041,3.40e-07,80 | |||
|phase1_expression=0.160148847104794,3.14077866875425,1.81999695755814,2.11724947914781,1.00179145989269,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,2.99798785634096,2.02475267389826,1.39912375625629,2.36596624018678,1.7824876368746,0.42438965179803,9.43980520676875,0,0,1.43993180514066,0.45881856213434,1.14846392823004,1.7230479846363,1.29282739611533,0.190023419456374,0.504060259519861,0.221730510655305,0,0,0,1.1554064790051,1.32987716286794,1.83752420636132,0.837063261473815,0.7813353445238,1.0470474879476,0,3.41522742479223,6.311634589405,11.9601977076798,14.9024088892686,6.60768307782054,4.69434806608824,0.218025156380447,0,0,1.95980990275508,0,0.335565212115473,0,0,19.551717138732,18.0516067161417,33.5186859980338,0,0,0,0,2.66788438833342,3.5995988691256,6.92206453796882,5.6838409195688,2.09720077362883,0.384218305321555,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0.614426133024974,0,0,0,0.558365998002762,1.12552522006336,0.61119299110724,0,0.284743361598206,0.186399445825301,4.46784540665786,2.79614772395106,50.7262855227936,28.3939879403858,2.03991400112325,0.539703191637817,3.89865850468601,0.896053774194671,4.77511028447956,5.79463096765396,4.67614808285164,2.82671659608272,0,8.98285341900225,0,7.11066703153331,7.36069539438128,6.58735650235256,4.04419556011827,7.19358442230078,14.2415836005944,9.20341262201914,0.346970653532272,1.52232739156071,0.230615497256059,5.57673770044703,4.8211369925639,7.28866229712118,11.8653584512499,20.5331086826275,5.30766331169925,3.558870698843,4.41683036920787,4.363877278217,7.45567044872489,0.292780797011547,0.209446706813455,6.13096932500619,0.359445373517761,0,0.254140454146129,1.19832511523858,0.457500602818626,0,1.04294592115366,1.27857728665165,1.0389402227978,0.486723789203273,3.05518091550949,5.349499736234,7.83440551144392,9.46988351489133,0,0,0.540186389416048,0,0.748401490664606,1.40925092313335,0.843315521037559,3.62184719034622,0,0,0,0.43839146485515,0.556094498451196,2.089512999133,3.49829631893504,0.59710280045548,0,0,0.284163499395593,0,0.469052119962192,0.720248245844059,0.473489471170421,1.37734962223183,1.3884040159864,1.62773761325285,5.09719462659276,8.4071046504362,6.41783414662574,11.1633875573785,14.8355921468916,16.6667985664879,31.8347667172023,21.6072334204199,0.841159794256509,0.102904612379284,2.97376904685418,14.8092317331585,0.426576501070468,0.464473343720877,0.515469845288373,1.61346819698674,1.55664630691409,4.37518940058886,6.64340686162316,2.63518327558417,6.53471542880701,7.36138946552258,2.9244613067868,10.7858329038507,6.48414149624083,6.37252074413975,0,0.342745537829186,0,0.610953983535943,3.10323979468201,1.33258057791605,3.22506339333712,10.1851002105925,13.9728867778824,5.79966670432462,4.44678940630723,0.166845105716094,0.589676985339609,1.57403478669398,0.811440485554012,1.20588579876208,0.763877555344259,5.75392274901621,7.13394997810156,8.78596522201861,10.0637744569148,13.7692150637346,10.9213185590096,5.80931419278357,7.89348619496414,4.3419916922703,38.4286635546538,0,0.162964976442026,0.848725428875941,0.234690248288502,2.84760637651087,15.9489239393629,7.80534591431195,12.7684466726015,18.6030339304971,10.8429242687091,27.8567635016755,33.6735714638496,24.7349890174385,69.3639906120652,188.191366601274,11.8023425524569,16.5562047782839,1.12385412991454,0.586058432961016,2.95082901678016,8.07906967053994,0,0.390438744296638,0,0,0,0,0,0,0,0.963963949265421,10.5035663054119,1.6025904330053,1.62886959353576,21.9410263553472,3.98235415019888,0.971122544619926,0.604647113929502,1.69744571780308,1.18120757152309,9.83792473420568,12.9214146584111,9.81541069589265,8.91243445961803,6.32073515871632,7.37930260024991,8.25084345985495,2.38307724027652,0.36012218806262,0.129358683782755,0,0.354680467284547,1.07021290561242,0.329098041204242,2.13125464380219,7.50949465803873,7.83778662196135,2.42581237860458,5.27636009412736,10.0107944551461,4.16159182004275,3.70054266409723,2.46211349617592,6.12109756922687,1.8542530201051,6.32222258952055,1.65109494370578,21.6677597022563,4.52084296811258,5.33107488111998,7.32090154260872,2.03974115992626,1.81936888020755,2.07299960706636,7.63736494412091,0.158167996790568,1.01659733563424,2.70013352054503,3.76358932826044,4.14888871117737,5.39457385539283,7.02554373665355,8.89970202745701,4.01806417204558,21.1255366449555,0.56369293868419,0,0.165458490457098,0,0.129159823477731,1.68956125490778,1.76035857968631,0.2604087696879,0.943734099831398,0.966336483304024,1.15212002503146,10.7443781013581,1.01362607645082,2.2596410576262,5.3267537420896,5.37080087002444,4.17230845040656,5.52899067791857,4.87375439676105,5.55315474714812,4.34378797933499,5.34378781225255,7.30934105548143,5.19543944857779,4.9088298916259,12.0167103316062,0.221985953374065,0,0.167884616364078,12.5573236120924,28.1523713176773,60.806339256732,22.2943114242228,4.01257683228291,0,0,0,0.515559547031063,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0,1.03552062350364,0,0.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| |||
|short_description=p1@D14Ertd668e | |||
}} | |||
Revision as of 02:38, 13 September 2013
| Short description: | p1@D14Ertd668e |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_D14Ertd668e_5end |
| Coexpression cluster: | MCL_coexpression_mm9:86 |
| Association with transcript: | 0bp_to_ENSMUST00000160425, ENSMUST00000161754_5end |
| EntrezGene: | D14Ertd668e |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| trunk | 3.07e-09 | 90 |
| endoderm-derived structure | 3.31e-08 | 118 |
| endoderm | 3.31e-08 | 118 |
| presumptive endoderm | 3.31e-08 | 118 |
| subdivision of digestive tract | 5.07e-08 | 114 |
| digestive system | 1.25e-07 | 116 |
| digestive tract | 1.25e-07 | 116 |
| primitive gut | 1.25e-07 | 116 |
| trunk region element | 2.33e-07 | 79 |
| splanchnic layer of lateral plate mesoderm | 2.72e-07 | 33 |
| foregut | 3.40e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
