FFCP PHASE1:Mm9::chr14:80171112..80171125,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18530|HGNC=|MCL_coexpression_id=22|UniProt=Q7TSK3|association_with_transcript=0bp_to_ENSMUST00000039568,NM_001042726,NM_021543,uc007uti.2,uc007utj.2_5end|description=CAGE_peak_1_at_Pcdh8_5end|id=chr14:80171112..80171125,-|ontology_enrichment_celltype=CL:0000117!8.27e-17!23;CL:0000337!8.27e-17!23;CL:0000540!6.17e-12!33;CL:0000047!6.17e-12!33;CL:0000031!6.17e-12!33;CL:0000404!6.17e-12!33;CL:0000221!4.94e-09!44;CL:0000133!4.94e-09!44;CL:0002319!8.25e-09!43;CL:0000393!5.84e-08!39;CL:0000211!5.84e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.28e-21,23;CL:0000337,1.28e-21,23;CL:0000540,3.03e-13,33;CL:0000047,3.03e-13,33;CL:0000031,3.03e-13,33;CL:0000404,3.03e-13,33;CL:0000221,8.14e-10,44;CL:0000133,8.14e-10,44;CL:0000393,9.44e-10,39;CL:0000211,9.44e-10,39;CL:0002319,1.56e-09,43;CL:0002609,9.14e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.50e-25!73;UBERON:0005743!9.50e-25!73;UBERON:0000073!1.15e-23!75;UBERON:0001016!1.15e-23!75;UBERON:0001049!1.23e-23!52;UBERON:0005068!1.23e-23!52;UBERON:0006241!1.23e-23!52;UBERON:0007135!1.23e-23!52;UBERON:0000033!6.91e-23!63;UBERON:0003056!1.91e-22!49;UBERON:0000955!6.96e-22!50;UBERON:0006238!6.96e-22!50;UBERON:0002616!2.47e-21!49;UBERON:0003080!1.06e-20!40;UBERON:0002780!4.94e-20!39;UBERON:0001890!4.94e-20!39;UBERON:0006240!4.94e-20!39;UBERON:0002020!1.51e-19!34;UBERON:0002346!4.50e-19!71;UBERON:0003075!4.50e-19!71;UBERON:0007284!4.50e-19!71;UBERON:0004121!1.07e-17!102;UBERON:0000924!1.07e-17!102;UBERON:0006601!1.07e-17!102;UBERON:0002791!5.25e-16!29;UBERON:0003528!5.25e-16!29;UBERON:0001893!5.25e-16!29;UBERON:0000153!1.43e-13!94;UBERON:0007811!2.37e-13!86;UBERON:0000956!8.56e-11!21;UBERON:0001869!8.56e-11!21;UBERON:0000203!8.56e-11!21;UBERON:0002619!2.60e-08!17;UBERON:0002021!4.39e-07!10;UBERON:0000411!4.39e-07!10;UBERON:0001950!4.39e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.00e-32,54;UBERON:0001049,1.95e-30,52;UBERON:0005068,1.95e-30,52;UBERON:0006241,1.95e-30,52;UBERON:0007135,1.95e-30,52;UBERON:0001017,2.64e-29,73;UBERON:0002346,2.82e-28,64;UBERON:0003075,2.82e-28,64;UBERON:0007284,2.82e-28,64;UBERON:0001016,6.32e-28,75;UBERON:0003080,1.91e-26,40;UBERON:0003056,2.84e-26,49;UBERON:0002020,5.58e-26,34;UBERON:0000955,9.91e-26,47;UBERON:0006238,9.91e-26,47;UBERON:0002780,1.45e-25,39;UBERON:0001890,1.45e-25,39;UBERON:0006240,1.45e-25,39;UBERON:0002616,5.08e-25,46;UBERON:0010371,2.04e-24,73;UBERON:0004121,7.39e-24,95;UBERON:0000924,7.39e-24,95;UBERON:0006601,7.39e-24,95;UBERON:0003528,2.76e-21,29;UBERON:0002791,2.76e-21,29;UBERON:0001893,2.76e-21,29;UBERON:0010314,3.00e-15,92;UBERON:0000956,2.23e-14,21;UBERON:0001869,2.23e-14,21;UBERON:0000203,2.23e-14,21;UBERON:0002619,4.39e-11,17;UBERON:0002021,7.86e-09,10;UBERON:0000411,7.86e-09,10;UBERON:0001950,7.86e-09,10;UBERON:0002420,3.81e-08,8;UBERON:0007245,3.81e-08,8;UBERON:0010009,3.81e-08,8;UBERON:0010011,3.81e-08,8;UBERON:0000454,3.81e-08,8|phase1_expression=3.36312578920067,0.348975407639361,0,0,0.500895729946347,1.51091344720701,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0.665191531965914,0,0,0,2.59966457776147,3.82339684324532,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,1.43752564364972,0,0,0,0,0,0,35.8100135721488,32.268449735594,30.4239073682966,0,0,0,0,0,0.599200221036809,3.84218305321555,14.9313041724208,19.1708432431001,16.6156719467592,14.8538511889978,14.1355866209033,12.7390431183552,15.814502718009,17.4651569455904,7.70811166995721,9.3211756802187,9.98442466165583,26.6410301214992,34.7653045689157,22.9201883044974,8.93385596804419,7.87867654044352,16.3494125121187,16.2045722010517,21.0710087582672,15.8439528951505,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,1.97180787687353,0,0,0,2.81438353314578,2.28023878927589,2.02209778005913,0.34255163915718,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46612694769419,0.255457055208591,0,0.599902730993408,0,12.1330417917906,4.57500602818627,25.2565247746857,7.12679712788333,8.95004100656157,9.14267396062064,13.6282660976916,0.101839363850316,0.124406970610093,0,1.26265113531884,0.390361328888111,0.459804208866946,0.720248519221397,2.26057226753573,3.46986145671772,3.07472928683639,4.12287588062807,2.84573707812917,0.862271971731369,0.945530400839096,2.63926686245923,2.84954452155847,1.66828349535359,0,0.205782136407943,0.995171334092466,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,21.0289948564127,39.9269896031624,0,0.264450566663544,0,0,0.38660238396628,0.403367049246685,0.22237804384487,0,1.42358718463353,0.494096864172033,1.00534083520108,0.994782360205754,1.36474860983384,0,0.432276099749388,0,1.13800740571849,0.685491075658373,1.1270773567308,1.22190796707189,0.581857461502877,0.49095073923223,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,4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| ||
|EntrezGene=18530 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=Q7TSK3 | |||
|association_with_transcript=0bp_to_ENSMUST00000039568,NM_001042726,NM_021543,uc007uti.2,uc007utj.2_5end | |||
|description=CAGE_peak_1_at_Pcdh8_5end | |||
|id=chr14:80171112..80171125,- | |||
|ontology_enrichment_celltype=CL:0000117!8.27e-17!23;CL:0000337!8.27e-17!23;CL:0000540!6.17e-12!33;CL:0000047!6.17e-12!33;CL:0000031!6.17e-12!33;CL:0000404!6.17e-12!33;CL:0000221!4.94e-09!44;CL:0000133!4.94e-09!44;CL:0002319!8.25e-09!43;CL:0000393!5.84e-08!39;CL:0000211!5.84e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.28e-21,23;CL:0000337,1.28e-21,23;CL:0000540,3.03e-13,33;CL:0000047,3.03e-13,33;CL:0000031,3.03e-13,33;CL:0000404,3.03e-13,33;CL:0000221,8.14e-10,44;CL:0000133,8.14e-10,44;CL:0000393,9.44e-10,39;CL:0000211,9.44e-10,39;CL:0002319,1.56e-09,43;CL:0002609,9.14e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.50e-25!73;UBERON:0005743!9.50e-25!73;UBERON:0000073!1.15e-23!75;UBERON:0001016!1.15e-23!75;UBERON:0001049!1.23e-23!52;UBERON:0005068!1.23e-23!52;UBERON:0006241!1.23e-23!52;UBERON:0007135!1.23e-23!52;UBERON:0000033!6.91e-23!63;UBERON:0003056!1.91e-22!49;UBERON:0000955!6.96e-22!50;UBERON:0006238!6.96e-22!50;UBERON:0002616!2.47e-21!49;UBERON:0003080!1.06e-20!40;UBERON:0002780!4.94e-20!39;UBERON:0001890!4.94e-20!39;UBERON:0006240!4.94e-20!39;UBERON:0002020!1.51e-19!34;UBERON:0002346!4.50e-19!71;UBERON:0003075!4.50e-19!71;UBERON:0007284!4.50e-19!71;UBERON:0004121!1.07e-17!102;UBERON:0000924!1.07e-17!102;UBERON:0006601!1.07e-17!102;UBERON:0002791!5.25e-16!29;UBERON:0003528!5.25e-16!29;UBERON:0001893!5.25e-16!29;UBERON:0000153!1.43e-13!94;UBERON:0007811!2.37e-13!86;UBERON:0000956!8.56e-11!21;UBERON:0001869!8.56e-11!21;UBERON:0000203!8.56e-11!21;UBERON:0002619!2.60e-08!17;UBERON:0002021!4.39e-07!10;UBERON:0000411!4.39e-07!10;UBERON:0001950!4.39e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.00e-32,54;UBERON:0001049,1.95e-30,52;UBERON:0005068,1.95e-30,52;UBERON:0006241,1.95e-30,52;UBERON:0007135,1.95e-30,52;UBERON:0001017,2.64e-29,73;UBERON:0002346,2.82e-28,64;UBERON:0003075,2.82e-28,64;UBERON:0007284,2.82e-28,64;UBERON:0001016,6.32e-28,75;UBERON:0003080,1.91e-26,40;UBERON:0003056,2.84e-26,49;UBERON:0002020,5.58e-26,34;UBERON:0000955,9.91e-26,47;UBERON:0006238,9.91e-26,47;UBERON:0002780,1.45e-25,39;UBERON:0001890,1.45e-25,39;UBERON:0006240,1.45e-25,39;UBERON:0002616,5.08e-25,46;UBERON:0010371,2.04e-24,73;UBERON:0004121,7.39e-24,95;UBERON:0000924,7.39e-24,95;UBERON:0006601,7.39e-24,95;UBERON:0003528,2.76e-21,29;UBERON:0002791,2.76e-21,29;UBERON:0001893,2.76e-21,29;UBERON:0010314,3.00e-15,92;UBERON:0000956,2.23e-14,21;UBERON:0001869,2.23e-14,21;UBERON:0000203,2.23e-14,21;UBERON:0002619,4.39e-11,17;UBERON:0002021,7.86e-09,10;UBERON:0000411,7.86e-09,10;UBERON:0001950,7.86e-09,10;UBERON:0002420,3.81e-08,8;UBERON:0007245,3.81e-08,8;UBERON:0010009,3.81e-08,8;UBERON:0010011,3.81e-08,8;UBERON:0000454,3.81e-08,8 | |||
|phase1_expression=3.36312578920067,0.348975407639361,0,0,0.500895729946347,1.51091344720701,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0.665191531965914,0,0,0,2.59966457776147,3.82339684324532,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,1.43752564364972,0,0,0,0,0,0,35.8100135721488,32.268449735594,30.4239073682966,0,0,0,0,0,0.599200221036809,3.84218305321555,14.9313041724208,19.1708432431001,16.6156719467592,14.8538511889978,14.1355866209033,12.7390431183552,15.814502718009,17.4651569455904,7.70811166995721,9.3211756802187,9.98442466165583,26.6410301214992,34.7653045689157,22.9201883044974,8.93385596804419,7.87867654044352,16.3494125121187,16.2045722010517,21.0710087582672,15.8439528951505,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,1.97180787687353,0,0,0,2.81438353314578,2.28023878927589,2.02209778005913,0.34255163915718,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46612694769419,0.255457055208591,0,0.599902730993408,0,12.1330417917906,4.57500602818627,25.2565247746857,7.12679712788333,8.95004100656157,9.14267396062064,13.6282660976916,0.101839363850316,0.124406970610093,0,1.26265113531884,0.390361328888111,0.459804208866946,0.720248519221397,2.26057226753573,3.46986145671772,3.07472928683639,4.12287588062807,2.84573707812917,0.862271971731369,0.945530400839096,2.63926686245923,2.84954452155847,1.66828349535359,0,0.205782136407943,0.995171334092466,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,21.0289948564127,39.9269896031624,0,0.264450566663544,0,0,0.38660238396628,0.403367049246685,0.22237804384487,0,1.42358718463353,0.494096864172033,1.00534083520108,0.994782360205754,1.36474860983384,0,0.432276099749388,0,1.13800740571849,0.685491075658373,1.1270773567308,1.22190796707189,0.581857461502877,0.49095073923223,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,4.17431533968259,4.80567915028033,0,0,0.631016438832513,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0.404810701674894,0,0,6.42642632843614,0.425820255624806,0.534196811001766,0.162886959353576,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,1.8006109403131,7.50280365939976,11.7885369267376,6.20690817747958,3.0322698992352,1.97458824722545,3.04464949114599,0.469343416127421,0,0,0.32977250588296,0,0.0603129249281559,0.119372344003136,0,0.582961673259701,3.8939313422207,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.108005340821801,0.836353184057875,0.87345025498471,0.674321731924103,0.165306911450672,0,0,0,0,3.43888055901151,3.14371131868485,1.75006069509643,0.774958940866387,0.337912250981556,0.352071715937262,0.2604087696879,0,0,0,0,0.810900861160657,0.616265742988964,0.51968329191118,0,0.198681354781265,0,0.443068581523732,0.201932899896295,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,9.03602948187307,8.74617949363636,8.59343270159095,11.1704568523397,10.2762377965596,7.55393897389701,12.8254275044043,10.3573876741571,10.4222754066367,10.3552062350364,1.764384908931,5.58634822761443,3.75613932659095,2.43106717068294,1.25767897576789,2.38996560985018,1.33348036680969,1.64828045791115,2.24643446714271,3.03236654116557,2.28131369901216,2.64076877940507,2.34103768674706,3.52138338226781,3.33125719942557,4.28664322154766,2.89710814862139,3.47236596834669,1.64834360321323,1.61918812147837,1.71434626192708,1.77475806159337,5.24559617884106,1.74415699958794,2.07040636913727,2.45382362885862,2.56099162021882,2.89376682581627,2.44447404922551,2.80571135828869,2.25406534435931,2.56111654176465,3.27384834535751,2.32405261778949,2.12197272079256,8.24374907195222,3.27504251823572,1.50409737833809,0.765153328275374,0.220591419119515,0 | |||
|short_description=p1@Pcdh8 | |||
}} |
Revision as of 03:11, 13 September 2013
Short description: | p1@Pcdh8 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcdh8_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000039568, NM_001042726, NM_021543, uc007uti.2, uc007utj.2_5end |
EntrezGene: | Pcdh8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CNS neuron (sensu Vertebrata) | 1.28e-21 | 23 |
neuroblast (sensu Vertebrata) | 1.28e-21 | 23 |
neuron | 3.03e-13 | 33 |
neuronal stem cell | 3.03e-13 | 33 |
neuroblast | 3.03e-13 | 33 |
electrically signaling cell | 3.03e-13 | 33 |
ectodermal cell | 8.14e-10 | 44 |
neurectodermal cell | 8.14e-10 | 44 |
electrically responsive cell | 9.44e-10 | 39 |
electrically active cell | 9.44e-10 | 39 |
neural cell | 1.56e-09 | 43 |
neuron of cerebral cortex | 9.14e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.