FFCP PHASE1:Mm9::chr15:6395320..6395353,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12279|HGNC=|MCL_coexpression_id=73|UniProt=P06683|association_with_transcript=0bp_to_ENSMUST00000022749,ENSMUST00000170407,NM_013485,uc007vdh.1_5end|description=CAGE_peak_1_at_C9_5end|id=chr15:6395320..6395353,+|ontology_enrichment_celltype=CL:0000181!8.09e-07!5;CL:0000417!8.09e-07!5;CL:0000668!8.09e-07!5;CL:0000412!8.09e-07!5;CL:0000182!8.09e-07!5|ontology_enrichment_celltype_v019_2=CL:0000182,4.98e-11,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.03e-20!22;UBERON:0007499!4.03e-20!22;UBERON:0006925!4.03e-20!22;UBERON:0009497!4.03e-20!22;UBERON:0000015!4.03e-20!22;UBERON:0002423!4.03e-20!22;UBERON:0006235!4.03e-20!22;UBERON:0008835!4.03e-20!22;UBERON:0003894!4.03e-20!22;UBERON:0004161!4.03e-20!22;UBERON:0008836!4.03e-20!22;UBERON:0009854!7.15e-19!23;UBERON:0009856!7.15e-19!23;UBERON:0002365!3.91e-18!25;UBERON:0002330!3.91e-18!25;UBERON:0005256!9.68e-10!47;UBERON:0005172!1.20e-09!49;UBERON:0005173!1.20e-09!49;UBERON:0002417!1.20e-09!49;UBERON:0000916!1.20e-09!49;UBERON:0003914!3.89e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.79e-33,22;UBERON:0007499,2.79e-33,22;UBERON:0006925,2.79e-33,22;UBERON:0009497,2.79e-33,22;UBERON:0000015,2.79e-33,22;UBERON:0002423,2.79e-33,22;UBERON:0006235,2.79e-33,22;UBERON:0008835,2.79e-33,22;UBERON:0003894,2.79e-33,22;UBERON:0004161,2.79e-33,22;UBERON:0008836,2.79e-33,22;UBERON:0009854,1.39e-31,23;UBERON:0009856,1.39e-31,23;UBERON:0002365,1.36e-28,25;UBERON:0002330,1.36e-28,25;UBERON:0005256,5.37e-15,45;UBERON:0005172,2.64e-13,49;UBERON:0005173,2.64e-13,49;UBERON:0002417,2.64e-13,49;UBERON:0000916,2.64e-13,49;UBERON:0003914,1.36e-12,47;UBERON:0003929,5.48e-10,55;UBERON:0002368,7.69e-10,60;UBERON:0003104,1.37e-09,61;UBERON:0009142,1.37e-09,61;UBERON:0002530,1.15e-08,65;UBERON:0009569,1.87e-08,66;UBERON:0000490,1.80e-07,66;UBERON:0000949,2.60e-07,72;UBERON:0005911,6.22e-07,69;UBERON:0001041,7.38e-07,80|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,2.89864488701678,697.803764231904,588.855174990912,1451.80158550573,1068.88220670142,782.254944871948,129.770644201739,0,0,0,0,0,0,0,0,0,0,203.133122020208,0,4.89859058913922,0,0.304465478312141,0.691846491768175,0.150722640552623,0,0.628332956648377,3.70792451601561,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753524089178575,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0,0,0,0.213288250535234,0.464473343720877,1.80414445850931,2.62188582010345,0.667134131534611,0.380451252225118,0,0.164698954724011,0.502670417600539,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,348.035384200313,0,0.196558995113203,1.34917267430912,7.91154473415161,15.1941610644023,16.0414286622294,7.48009957372108,1.13494658742525,5.21666685057355,34.5043695665651,34.6091081331708,48.3658393327569,78.2994521636046,153.922980801801,291.878330424837,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,1.26203287766503,0,0,0,0.445597348164788,0.849229592366497,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,3.81868247206045,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0.134864346384821,3.2234847732881,0.26175594198403,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94485373654635,0.628839487883947,0.551530525350042,1.55572709461131,2.06035057238894,1.92551525755089,1.26348605881899,2.02783439912192,1.50901073108861,1.49826411951812,1.40855335290712,1.20614484806788,1.42888107384922,1.15884325944855,0.578727661391115,1.23625770240992,0.735994600671987,0.342869252385415,1.59728225543404,0.953744759789284,0.872078499793971,1.31753132581463,1.18460451048347,1.64635175585495,1.57841826862706,1.7654534799962,1.68342681497322,0.355905054372522,1.0835493061312,0,0.77468420592983,0.771626443924566,0,0,0,0,0.220591419119515,0|short_description=p1@C9}} | ||
|EntrezGene=12279 | |||
|HGNC= | |||
|MCL_coexpression_id=73 | |||
|UniProt=P06683 | |||
|association_with_transcript=0bp_to_ENSMUST00000022749,ENSMUST00000170407,NM_013485,uc007vdh.1_5end | |||
|description=CAGE_peak_1_at_C9_5end | |||
|id=chr15:6395320..6395353,+ | |||
|ontology_enrichment_celltype=CL:0000181!8.09e-07!5;CL:0000417!8.09e-07!5;CL:0000668!8.09e-07!5;CL:0000412!8.09e-07!5;CL:0000182!8.09e-07!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.98e-11,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.03e-20!22;UBERON:0007499!4.03e-20!22;UBERON:0006925!4.03e-20!22;UBERON:0009497!4.03e-20!22;UBERON:0000015!4.03e-20!22;UBERON:0002423!4.03e-20!22;UBERON:0006235!4.03e-20!22;UBERON:0008835!4.03e-20!22;UBERON:0003894!4.03e-20!22;UBERON:0004161!4.03e-20!22;UBERON:0008836!4.03e-20!22;UBERON:0009854!7.15e-19!23;UBERON:0009856!7.15e-19!23;UBERON:0002365!3.91e-18!25;UBERON:0002330!3.91e-18!25;UBERON:0005256!9.68e-10!47;UBERON:0005172!1.20e-09!49;UBERON:0005173!1.20e-09!49;UBERON:0002417!1.20e-09!49;UBERON:0000916!1.20e-09!49;UBERON:0003914!3.89e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.79e-33,22;UBERON:0007499,2.79e-33,22;UBERON:0006925,2.79e-33,22;UBERON:0009497,2.79e-33,22;UBERON:0000015,2.79e-33,22;UBERON:0002423,2.79e-33,22;UBERON:0006235,2.79e-33,22;UBERON:0008835,2.79e-33,22;UBERON:0003894,2.79e-33,22;UBERON:0004161,2.79e-33,22;UBERON:0008836,2.79e-33,22;UBERON:0009854,1.39e-31,23;UBERON:0009856,1.39e-31,23;UBERON:0002365,1.36e-28,25;UBERON:0002330,1.36e-28,25;UBERON:0005256,5.37e-15,45;UBERON:0005172,2.64e-13,49;UBERON:0005173,2.64e-13,49;UBERON:0002417,2.64e-13,49;UBERON:0000916,2.64e-13,49;UBERON:0003914,1.36e-12,47;UBERON:0003929,5.48e-10,55;UBERON:0002368,7.69e-10,60;UBERON:0003104,1.37e-09,61;UBERON:0009142,1.37e-09,61;UBERON:0002530,1.15e-08,65;UBERON:0009569,1.87e-08,66;UBERON:0000490,1.80e-07,66;UBERON:0000949,2.60e-07,72;UBERON:0005911,6.22e-07,69;UBERON:0001041,7.38e-07,80 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,2.89864488701678,697.803764231904,588.855174990912,1451.80158550573,1068.88220670142,782.254944871948,129.770644201739,0,0,0,0,0,0,0,0,0,0,203.133122020208,0,4.89859058913922,0,0.304465478312141,0.691846491768175,0.150722640552623,0,0.628332956648377,3.70792451601561,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753524089178575,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0,0,0,0.213288250535234,0.464473343720877,1.80414445850931,2.62188582010345,0.667134131534611,0.380451252225118,0,0.164698954724011,0.502670417600539,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,348.035384200313,0,0.196558995113203,1.34917267430912,7.91154473415161,15.1941610644023,16.0414286622294,7.48009957372108,1.13494658742525,5.21666685057355,34.5043695665651,34.6091081331708,48.3658393327569,78.2994521636046,153.922980801801,291.878330424837,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,1.26203287766503,0,0,0,0.445597348164788,0.849229592366497,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,3.81868247206045,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0.134864346384821,3.2234847732881,0.26175594198403,0,0,0,0,0,0,0,0,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94485373654635,0.628839487883947,0.551530525350042,1.55572709461131,2.06035057238894,1.92551525755089,1.26348605881899,2.02783439912192,1.50901073108861,1.49826411951812,1.40855335290712,1.20614484806788,1.42888107384922,1.15884325944855,0.578727661391115,1.23625770240992,0.735994600671987,0.342869252385415,1.59728225543404,0.953744759789284,0.872078499793971,1.31753132581463,1.18460451048347,1.64635175585495,1.57841826862706,1.7654534799962,1.68342681497322,0.355905054372522,1.0835493061312,0,0.77468420592983,0.771626443924566,0,0,0,0,0.220591419119515,0 | |||
|short_description=p1@C9 | |||
}} |
Revision as of 10:42, 13 September 2013
Short description: | p1@C9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C9_5end |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | 0bp_to_ENSMUST00000022749, ENSMUST00000170407, NM_013485, uc007vdh.1_5end |
EntrezGene: | C9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.98e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 2.79e-33 | 22 |
epithelial sac | 2.79e-33 | 22 |
digestive gland | 2.79e-33 | 22 |
epithelium of foregut-midgut junction | 2.79e-33 | 22 |
anatomical boundary | 2.79e-33 | 22 |
hepatobiliary system | 2.79e-33 | 22 |
foregut-midgut junction | 2.79e-33 | 22 |
hepatic diverticulum | 2.79e-33 | 22 |
liver primordium | 2.79e-33 | 22 |
septum transversum | 2.79e-33 | 22 |
liver bud | 2.79e-33 | 22 |
digestive tract diverticulum | 1.39e-31 | 23 |
sac | 1.39e-31 | 23 |
exocrine gland | 1.36e-28 | 25 |
exocrine system | 1.36e-28 | 25 |
trunk mesenchyme | 5.37e-15 | 45 |
abdomen element | 2.64e-13 | 49 |
abdominal segment element | 2.64e-13 | 49 |
abdominal segment of trunk | 2.64e-13 | 49 |
abdomen | 2.64e-13 | 49 |
epithelial tube | 1.36e-12 | 47 |
gut epithelium | 5.48e-10 | 55 |
endocrine gland | 7.69e-10 | 60 |
mesenchyme | 1.37e-09 | 61 |
entire embryonic mesenchyme | 1.37e-09 | 61 |
gland | 1.15e-08 | 65 |
subdivision of trunk | 1.87e-08 | 66 |
unilaminar epithelium | 1.80e-07 | 66 |
endocrine system | 2.60e-07 | 72 |
endo-epithelium | 6.22e-07 | 69 |
foregut | 7.38e-07 | 80 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.