FFCP PHASE1:Hg19::chr4:83351556..83351628,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5037 | |||
|TSSclassifier=S | |||
|UniProt=O14979 | |||
|association_with_transcript=-178bp_to_NM_001207000,NM_031372,NR_003249,uc003hmq.2,uc003hmr.2,uc003hms.2,uc003hmt.2_5end | |||
|description=CAGE_peak_3_at_HNRPDL_5end | |||
|id=chr4:83351556..83351628,- | |||
|ontology_enrichment_celltype=CL:0000542!4.84e-18!53;CL:0000051!4.84e-18!53;CL:0000838!9.26e-18!52;CL:0000037!4.44e-15!172;CL:0000566!4.44e-15!172;CL:0000988!3.14e-13!182;CL:0002032!1.28e-12!165;CL:0000837!1.28e-12!165;CL:0000084!7.42e-10!25;CL:0000827!7.42e-10!25;CL:0000738!7.77e-09!140;CL:0000791!2.28e-08!18;CL:0000789!2.28e-08!18;CL:0002420!2.28e-08!18;CL:0002419!2.28e-08!18;CL:0000790!2.28e-08!18;CL:0002031!5.44e-08!124;CL:0000945!1.09e-07!24;CL:0000826!1.09e-07!24;CL:0002087!3.20e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.32e-11;53!CL:0000084;5.65e-10;25!CL:0000791;1.92e-08;18!CL:0000789;1.92e-08;18!CL:0002419;1.92e-08;18!CL:0000945;9.62e-08;24 | |||
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| |||
|short_description=p3@HNRPDL | |||
}} |
Revision as of 12:02, 13 September 2013
Short description: | p3@HNRPDL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_HNRPDL_5end |
Coexpression cluster: | NA |
Association with transcript: | -178bp_to_NM_001207000, NM_031372, NR_003249, uc003hmq.2, uc003hmr.2, uc003hms.2, uc003hmt.2_5end |
EntrezGene: | HNRPDL |
HGNC: | 5037 |
UniProt: | O14979 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.84e-18 | 53 |
common lymphoid progenitor | 4.84e-18 | 53 |
lymphoid lineage restricted progenitor cell | 9.26e-18 | 52 |
hematopoietic stem cell | 1.49e-15 | 168 |
hematopoietic cell | 4.70e-14 | 177 |
hematopoietic oligopotent progenitor cell | 4.82e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.82e-13 | 161 |
T cell | 7.42e-10 | 25 |
pro-T cell | 7.42e-10 | 25 |
leukocyte | 3.39e-09 | 136 |
mature alpha-beta T cell | 2.28e-08 | 18 |
alpha-beta T cell | 2.28e-08 | 18 |
immature T cell | 2.28e-08 | 18 |
mature T cell | 2.28e-08 | 18 |
immature alpha-beta T cell | 2.28e-08 | 18 |
hematopoietic lineage restricted progenitor cell | 2.35e-08 | 120 |
lymphocyte of B lineage | 1.09e-07 | 24 |
pro-B cell | 1.09e-07 | 24 |
nongranular leukocyte | 1.45e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.20e-19 | 89 |
central nervous system | 3.58e-18 | 81 |
neural tube | 2.26e-16 | 56 |
neural rod | 2.26e-16 | 56 |
future spinal cord | 2.26e-16 | 56 |
neural keel | 2.26e-16 | 56 |
regional part of nervous system | 2.40e-15 | 53 |
regional part of brain | 2.40e-15 | 53 |
brain | 1.38e-13 | 68 |
future brain | 1.38e-13 | 68 |
adult organism | 2.92e-13 | 114 |
neurectoderm | 7.42e-13 | 86 |
regional part of forebrain | 2.19e-12 | 41 |
forebrain | 2.19e-12 | 41 |
anterior neural tube | 2.19e-12 | 41 |
future forebrain | 2.19e-12 | 41 |
neural plate | 6.94e-12 | 82 |
presumptive neural plate | 6.94e-12 | 82 |
telencephalon | 1.22e-11 | 34 |
brain grey matter | 1.69e-11 | 34 |
gray matter | 1.69e-11 | 34 |
regional part of telencephalon | 9.39e-11 | 32 |
cerebral hemisphere | 1.48e-10 | 32 |
pre-chordal neural plate | 1.43e-09 | 61 |
ectoderm-derived structure | 2.24e-09 | 171 |
ectoderm | 2.24e-09 | 171 |
presumptive ectoderm | 2.24e-09 | 171 |
cerebral cortex | 2.86e-08 | 25 |
pallium | 2.86e-08 | 25 |
regional part of cerebral cortex | 6.06e-08 | 22 |
neocortex | 1.16e-07 | 20 |
ecto-epithelium | 1.50e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.43e-10 | 51 |
immune system cancer | 4.43e-10 | 51 |
leukemia | 9.32e-10 | 39 |
myeloid leukemia | 4.63e-07 | 31 |
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