FFCP PHASE1:Mm9::chr16:43503493..43503570,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=56490|HGNC=|MCL_coexpression_id=3050|UniProt=|association_with_transcript=-156bp_to_ENSMUST00000126100_5end|description=CAGE_peak_9_at_Zbtb20_5end|id=chr16:43503493..43503570,+|ontology_enrichment_celltype=CL:0000540!2.82e-14!33;CL:0000047!2.82e-14!33;CL:0000031!2.82e-14!33;CL:0000404!2.82e-14!33;CL:0000393!2.80e-13!39;CL:0000211!2.80e-13!39;CL:0000221!5.05e-12!44;CL:0000133!5.05e-12!44;CL:0002319!1.22e-11!43;CL:0000055!1.69e-10!50;CL:0000117!3.09e-09!23;CL:0000337!3.09e-09!23|ontology_enrichment_celltype_v019_2=CL:0000540,6.76e-17,33;CL:0000047,6.76e-17,33;CL:0000031,6.76e-17,33;CL:0000404,6.76e-17,33;CL:0000393,1.72e-14,39;CL:0000211,1.72e-14,39;CL:0000221,2.25e-13,44;CL:0000133,2.25e-13,44;CL:0002319,6.40e-13,43;CL:0000117,8.07e-11,23;CL:0000337,8.07e-11,23;CL:0000107,6.03e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.11e-23!73;UBERON:0005743!1.11e-23!73;UBERON:0000073!2.99e-22!75;UBERON:0001016!2.99e-22!75;UBERON:0004121!1.54e-19!102;UBERON:0000924!1.54e-19!102;UBERON:0006601!1.54e-19!102;UBERON:0000033!1.24e-16!63;UBERON:0001049!1.37e-16!52;UBERON:0005068!1.37e-16!52;UBERON:0006241!1.37e-16!52;UBERON:0007135!1.37e-16!52;UBERON:0000955!1.84e-16!50;UBERON:0006238!1.84e-16!50;UBERON:0002616!8.93e-16!49;UBERON:0002346!3.09e-15!71;UBERON:0003075!3.09e-15!71;UBERON:0007284!3.09e-15!71;UBERON:0003080!1.22e-11!40;UBERON:0002780!4.57e-11!39;UBERON:0001890!4.57e-11!39;UBERON:0006240!4.57e-11!39;UBERON:0003056!5.11e-11!49;UBERON:0002020!8.90e-11!34;UBERON:0004111!4.03e-10!122;UBERON:0002791!4.54e-09!29;UBERON:0003528!4.54e-09!29;UBERON:0001893!4.54e-09!29;UBERON:0000468!8.40e-09!333;UBERON:0000025!2.13e-08!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.04e-24,73;UBERON:0001016,2.51e-23,75;UBERON:0004121,6.20e-21,95;UBERON:0000924,6.20e-21,95;UBERON:0006601,6.20e-21,95;UBERON:0010314,1.22e-18,92;UBERON:0000073,4.21e-18,54;UBERON:0002346,9.55e-18,64;UBERON:0003075,9.55e-18,64;UBERON:0007284,9.55e-18,64;UBERON:0001049,7.43e-17,52;UBERON:0005068,7.43e-17,52;UBERON:0006241,7.43e-17,52;UBERON:0007135,7.43e-17,52;UBERON:0010371,1.21e-16,73;UBERON:0000955,7.54e-15,47;UBERON:0006238,7.54e-15,47;UBERON:0002616,4.32e-14,46;UBERON:0002020,2.64e-11,34;UBERON:0003080,3.77e-11,40;UBERON:0003056,8.39e-11,49;UBERON:0002780,1.65e-10,39;UBERON:0001890,1.65e-10,39;UBERON:0006240,1.65e-10,39;UBERON:0003528,2.72e-09,29;UBERON:0002791,2.72e-09,29;UBERON:0001893,2.72e-09,29;UBERON:0004111,6.65e-09,122;UBERON:0000025,2.53e-07,114;UBERON:0002410,6.03e-07,9;UBERON:0003076,7.31e-07,12;UBERON:0003057,7.31e-07,12|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0.548457734422955,0.84877930359606,1.53077922271926,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,1.11514624341466,0.550640256485045,1.56478268869608,1.74420125104357,0.878744730937887,2.3331587888914,0.419959264876088,0,0.503347818173209,0,0,0.514518872071894,1.43266719969378,0.515672092277442,2.83243045203437,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0,0,1.49800055259202,0.768436610643109,3.00699875694585,3.10513658162888,2.3135745748652,1.14260393761521,2.42955395046775,6.98197555525238,5.271500906003,5.51531271966013,3.30347642998166,4.08599481872601,5.22262213071228,2.1101806036831,1.64677758484337,3.64639359389732,2.23346399201105,2.25105044012672,5.95913166329559,5.30331453852602,5.12538050876771,3.16879057903011,0,0.226714680320357,0,0,0,0,0,0,1.12355536105401,0,0,0,3.09855523508697,0,0,0,0,0,0.505524445014783,0.34255163915718,1.55362730188303,1.1875371125186,0.173485326766136,0.304465478312141,0,0.753613202763113,0.940709657085638,1.0053327306374,0,1.44599356919912,0,0.970601099684455,0,1.45462575940567,0,14.6390398505774,9.63454851341893,0.255457055208591,0,0,0,5.99162557619291,8.6925114535539,10.178002521142,3.99795936442236,3.83573185995496,6.44142938134636,5.02947915510049,2.03678727700633,1.11966273549084,1.26361379216837,2.10441855886474,0.130120442962704,0.229902104433473,0,1.05493372485001,1.2246569847239,1.66547836370305,1.78033276663485,6.46758426847539,0,0.567318240503458,0.527853372491847,0.43839146485515,1.66828349535359,2.089512999133,0.823128545631774,0.398068533636986,0,0,0.284163499395593,1.86413195281952,2.57978665979206,3.24111710629827,3.78791576936336,3.93528463494808,4.9365476123961,2.79040733700489,2.68273401399619,1.63471479314037,1.81015834904829,2.29834449710733,2.02672023864639,1.75439984910399,0.878200461164203,0.536825675041487,20.6084149592845,38.4863250298524,0.330418782983798,0.264450566663544,0.213288250535234,0.464473343720877,0.644337306610467,0,0,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0.974820435595601,0.898819408654221,0.648414149624083,0.398282546508734,1.32767530667157,1.37098215131675,1.1270773567308,1.01825663922657,0.969762435838129,1.1221731182451,1.26473074248515,0.885660887877613,0.470996183524124,0.246794327843601,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.923765950833023,0.37898282354097,0.814824882210129,0.848725428875941,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0.664394068946325,0.797273843287435,0.983179888294428,1.72684981865896,0.723245292907558,0,0,0.983528546038072,0.275936746304732,4.17431533968259,3.8679856575427,0,0.757412781613119,2.52406575533005,2.73307121007647,3.66219776145758,5.25731355495614,6.46116154838943,6.79383673893198,4.85772842009873,4.9683495844923,7.90575555893047,14.7807805554031,2.41298144854057,0.178065603667255,1.95464351224291,6.76377504187395,0,0.728341908464944,0,0.188605079755898,0,0.307435147943927,0.516856586336442,1.09060118843252,0.356497378384721,1.26414703174326,0,0,9.53230896110606,1.62054984628179,0.517434735131018,0.857348140126369,2.30542303734956,3.21063871683727,1.97458824722545,0.608929898229199,1.40803024838226,0,1.10264199027481,0.32977250588296,1.29171541356724,1.32688434841943,0.596861720015682,1.31312719796049,0,3.8939313422207,0.512612642393558,0,0,0,0,0.228778173206523,0,0.139951452323658,0,0,0,0.203319467126849,0.86404272657441,0,0.436725127492355,0.539457385539283,0.495920734352016,0.785267825952089,0.129614973291793,2.4853572523477,0,0.149516546043979,0.165458490457098,0.777804753376191,0.904118764344118,2.19642963138012,1.40828686374905,3.51551839078665,1.04859344425711,0.241584120826006,0.288030006257865,0,0,0.308132871494482,0,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0.233753804363138,0.680191150845634,0,0,0,3.28422309854724,0.375364950902364,2.38097111547445,1.71494703263253,3.00943262421218,0.564751842617067,2.30162618253588,0.572895513439397,1.54667864109319,2.05524755931193,1.5107877947794,1.35004500046361,1.35096360967266,2.26571204492102,1.55328093525546,0.207574695168353,1.19707462020309,1.19513524027894,2.43106717068294,0.419226325255965,1.47074806760011,2.66696073361938,3.7086310303001,2.56735367673452,4.80124702351215,3.29523089857312,4.90428487603798,2.80924522409647,3.39333307745807,3.56099907524802,2.85776214769844,3.36064545240081,2.70072908649187,1.23625770240992,1.91358596174717,2.05721551431249,4.08194354166476,3.57654284920981,3.48831399917588,3.19971893412124,3.13074049199203,1.28049581010941,5.5244639401947,2.03706170768793,2.80571135828869,1.66089025373844,2.65962102414021,1.63692417267876,2.94379998253335,2.3148793317737,3.74715866906919,2.57324769289949,3.22306581072447,0.765153328275374,1.54413993383661,1.62307484934295|short_description=p9@Zbtb20}} | ||
|EntrezGene=56490 | |||
|HGNC= | |||
|MCL_coexpression_id=3050 | |||
|UniProt= | |||
|association_with_transcript=-156bp_to_ENSMUST00000126100_5end | |||
|description=CAGE_peak_9_at_Zbtb20_5end | |||
|id=chr16:43503493..43503570,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.82e-14!33;CL:0000047!2.82e-14!33;CL:0000031!2.82e-14!33;CL:0000404!2.82e-14!33;CL:0000393!2.80e-13!39;CL:0000211!2.80e-13!39;CL:0000221!5.05e-12!44;CL:0000133!5.05e-12!44;CL:0002319!1.22e-11!43;CL:0000055!1.69e-10!50;CL:0000117!3.09e-09!23;CL:0000337!3.09e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.76e-17,33;CL:0000047,6.76e-17,33;CL:0000031,6.76e-17,33;CL:0000404,6.76e-17,33;CL:0000393,1.72e-14,39;CL:0000211,1.72e-14,39;CL:0000221,2.25e-13,44;CL:0000133,2.25e-13,44;CL:0002319,6.40e-13,43;CL:0000117,8.07e-11,23;CL:0000337,8.07e-11,23;CL:0000107,6.03e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.11e-23!73;UBERON:0005743!1.11e-23!73;UBERON:0000073!2.99e-22!75;UBERON:0001016!2.99e-22!75;UBERON:0004121!1.54e-19!102;UBERON:0000924!1.54e-19!102;UBERON:0006601!1.54e-19!102;UBERON:0000033!1.24e-16!63;UBERON:0001049!1.37e-16!52;UBERON:0005068!1.37e-16!52;UBERON:0006241!1.37e-16!52;UBERON:0007135!1.37e-16!52;UBERON:0000955!1.84e-16!50;UBERON:0006238!1.84e-16!50;UBERON:0002616!8.93e-16!49;UBERON:0002346!3.09e-15!71;UBERON:0003075!3.09e-15!71;UBERON:0007284!3.09e-15!71;UBERON:0003080!1.22e-11!40;UBERON:0002780!4.57e-11!39;UBERON:0001890!4.57e-11!39;UBERON:0006240!4.57e-11!39;UBERON:0003056!5.11e-11!49;UBERON:0002020!8.90e-11!34;UBERON:0004111!4.03e-10!122;UBERON:0002791!4.54e-09!29;UBERON:0003528!4.54e-09!29;UBERON:0001893!4.54e-09!29;UBERON:0000468!8.40e-09!333;UBERON:0000025!2.13e-08!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.04e-24,73;UBERON:0001016,2.51e-23,75;UBERON:0004121,6.20e-21,95;UBERON:0000924,6.20e-21,95;UBERON:0006601,6.20e-21,95;UBERON:0010314,1.22e-18,92;UBERON:0000073,4.21e-18,54;UBERON:0002346,9.55e-18,64;UBERON:0003075,9.55e-18,64;UBERON:0007284,9.55e-18,64;UBERON:0001049,7.43e-17,52;UBERON:0005068,7.43e-17,52;UBERON:0006241,7.43e-17,52;UBERON:0007135,7.43e-17,52;UBERON:0010371,1.21e-16,73;UBERON:0000955,7.54e-15,47;UBERON:0006238,7.54e-15,47;UBERON:0002616,4.32e-14,46;UBERON:0002020,2.64e-11,34;UBERON:0003080,3.77e-11,40;UBERON:0003056,8.39e-11,49;UBERON:0002780,1.65e-10,39;UBERON:0001890,1.65e-10,39;UBERON:0006240,1.65e-10,39;UBERON:0003528,2.72e-09,29;UBERON:0002791,2.72e-09,29;UBERON:0001893,2.72e-09,29;UBERON:0004111,6.65e-09,122;UBERON:0000025,2.53e-07,114;UBERON:0002410,6.03e-07,9;UBERON:0003076,7.31e-07,12;UBERON:0003057,7.31e-07,12 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0.548457734422955,0.84877930359606,1.53077922271926,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,1.11514624341466,0.550640256485045,1.56478268869608,1.74420125104357,0.878744730937887,2.3331587888914,0.419959264876088,0,0.503347818173209,0,0,0.514518872071894,1.43266719969378,0.515672092277442,2.83243045203437,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0,0,1.49800055259202,0.768436610643109,3.00699875694585,3.10513658162888,2.3135745748652,1.14260393761521,2.42955395046775,6.98197555525238,5.271500906003,5.51531271966013,3.30347642998166,4.08599481872601,5.22262213071228,2.1101806036831,1.64677758484337,3.64639359389732,2.23346399201105,2.25105044012672,5.95913166329559,5.30331453852602,5.12538050876771,3.16879057903011,0,0.226714680320357,0,0,0,0,0,0,1.12355536105401,0,0,0,3.09855523508697,0,0,0,0,0,0.505524445014783,0.34255163915718,1.55362730188303,1.1875371125186,0.173485326766136,0.304465478312141,0,0.753613202763113,0.940709657085638,1.0053327306374,0,1.44599356919912,0,0.970601099684455,0,1.45462575940567,0,14.6390398505774,9.63454851341893,0.255457055208591,0,0,0,5.99162557619291,8.6925114535539,10.178002521142,3.99795936442236,3.83573185995496,6.44142938134636,5.02947915510049,2.03678727700633,1.11966273549084,1.26361379216837,2.10441855886474,0.130120442962704,0.229902104433473,0,1.05493372485001,1.2246569847239,1.66547836370305,1.78033276663485,6.46758426847539,0,0.567318240503458,0.527853372491847,0.43839146485515,1.66828349535359,2.089512999133,0.823128545631774,0.398068533636986,0,0,0.284163499395593,1.86413195281952,2.57978665979206,3.24111710629827,3.78791576936336,3.93528463494808,4.9365476123961,2.79040733700489,2.68273401399619,1.63471479314037,1.81015834904829,2.29834449710733,2.02672023864639,1.75439984910399,0.878200461164203,0.536825675041487,20.6084149592845,38.4863250298524,0.330418782983798,0.264450566663544,0.213288250535234,0.464473343720877,0.644337306610467,0,0,0.380451252225118,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0.974820435595601,0.898819408654221,0.648414149624083,0.398282546508734,1.32767530667157,1.37098215131675,1.1270773567308,1.01825663922657,0.969762435838129,1.1221731182451,1.26473074248515,0.885660887877613,0.470996183524124,0.246794327843601,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,0.923765950833023,0.37898282354097,0.814824882210129,0.848725428875941,0.234690248288502,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0.664394068946325,0.797273843287435,0.983179888294428,1.72684981865896,0.723245292907558,0,0,0.983528546038072,0.275936746304732,4.17431533968259,3.8679856575427,0,0.757412781613119,2.52406575533005,2.73307121007647,3.66219776145758,5.25731355495614,6.46116154838943,6.79383673893198,4.85772842009873,4.9683495844923,7.90575555893047,14.7807805554031,2.41298144854057,0.178065603667255,1.95464351224291,6.76377504187395,0,0.728341908464944,0,0.188605079755898,0,0.307435147943927,0.516856586336442,1.09060118843252,0.356497378384721,1.26414703174326,0,0,9.53230896110606,1.62054984628179,0.517434735131018,0.857348140126369,2.30542303734956,3.21063871683727,1.97458824722545,0.608929898229199,1.40803024838226,0,1.10264199027481,0.32977250588296,1.29171541356724,1.32688434841943,0.596861720015682,1.31312719796049,0,3.8939313422207,0.512612642393558,0,0,0,0,0.228778173206523,0,0.139951452323658,0,0,0,0.203319467126849,0.86404272657441,0,0.436725127492355,0.539457385539283,0.495920734352016,0.785267825952089,0.129614973291793,2.4853572523477,0,0.149516546043979,0.165458490457098,0.777804753376191,0.904118764344118,2.19642963138012,1.40828686374905,3.51551839078665,1.04859344425711,0.241584120826006,0.288030006257865,0,0,0.308132871494482,0,0.179026695667481,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0.233753804363138,0.680191150845634,0,0,0,3.28422309854724,0.375364950902364,2.38097111547445,1.71494703263253,3.00943262421218,0.564751842617067,2.30162618253588,0.572895513439397,1.54667864109319,2.05524755931193,1.5107877947794,1.35004500046361,1.35096360967266,2.26571204492102,1.55328093525546,0.207574695168353,1.19707462020309,1.19513524027894,2.43106717068294,0.419226325255965,1.47074806760011,2.66696073361938,3.7086310303001,2.56735367673452,4.80124702351215,3.29523089857312,4.90428487603798,2.80924522409647,3.39333307745807,3.56099907524802,2.85776214769844,3.36064545240081,2.70072908649187,1.23625770240992,1.91358596174717,2.05721551431249,4.08194354166476,3.57654284920981,3.48831399917588,3.19971893412124,3.13074049199203,1.28049581010941,5.5244639401947,2.03706170768793,2.80571135828869,1.66089025373844,2.65962102414021,1.63692417267876,2.94379998253335,2.3148793317737,3.74715866906919,2.57324769289949,3.22306581072447,0.765153328275374,1.54413993383661,1.62307484934295 | |||
|short_description=p9@Zbtb20 | |||
}} |
Revision as of 12:42, 13 September 2013
Short description: | p9@Zbtb20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Zbtb20_5end |
Coexpression cluster: | MCL_coexpression_mm9:3050 |
Association with transcript: | -156bp_to_ENSMUST00000126100_5end |
EntrezGene: | Zbtb20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.76e-17 | 33 |
neuronal stem cell | 6.76e-17 | 33 |
neuroblast | 6.76e-17 | 33 |
electrically signaling cell | 6.76e-17 | 33 |
electrically responsive cell | 1.72e-14 | 39 |
electrically active cell | 1.72e-14 | 39 |
ectodermal cell | 2.25e-13 | 44 |
neurectodermal cell | 2.25e-13 | 44 |
neural cell | 6.40e-13 | 43 |
CNS neuron (sensu Vertebrata) | 8.07e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.07e-11 | 23 |
autonomic neuron | 6.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.04e-24 | 73 |
nervous system | 2.51e-23 | 75 |
ectoderm-derived structure | 6.20e-21 | 95 |
ectoderm | 6.20e-21 | 95 |
presumptive ectoderm | 6.20e-21 | 95 |
structure with developmental contribution from neural crest | 1.22e-18 | 92 |
regional part of nervous system | 4.21e-18 | 54 |
neurectoderm | 9.55e-18 | 64 |
neural plate | 9.55e-18 | 64 |
presumptive neural plate | 9.55e-18 | 64 |
neural tube | 7.43e-17 | 52 |
neural rod | 7.43e-17 | 52 |
future spinal cord | 7.43e-17 | 52 |
neural keel | 7.43e-17 | 52 |
ecto-epithelium | 1.21e-16 | 73 |
brain | 7.54e-15 | 47 |
future brain | 7.54e-15 | 47 |
regional part of brain | 4.32e-14 | 46 |
gray matter | 2.64e-11 | 34 |
anterior neural tube | 3.77e-11 | 40 |
pre-chordal neural plate | 8.39e-11 | 49 |
regional part of forebrain | 1.65e-10 | 39 |
forebrain | 1.65e-10 | 39 |
future forebrain | 1.65e-10 | 39 |
brain grey matter | 2.72e-09 | 29 |
regional part of telencephalon | 2.72e-09 | 29 |
telencephalon | 2.72e-09 | 29 |
anatomical conduit | 6.65e-09 | 122 |
tube | 2.53e-07 | 114 |
autonomic nervous system | 6.03e-07 | 9 |
posterior neural tube | 7.31e-07 | 12 |
chordal neural plate | 7.31e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.