FFCP PHASE1:Hg19::chr5:31936230..31936265,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23037|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18486|TSSclassifier=N|UniProt=|association_with_transcript=0bp_to_ENST00000513852_5end|description=CAGE_peak_2_at_PDZD2_5end|id=chr5:31936230..31936265,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.08e-09;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.39e-42!115;UBERON:0001049!1.96e-28!57;UBERON:0005068!1.96e-28!57;UBERON:0006241!1.96e-28!57;UBERON:0007135!1.96e-28!57;UBERON:0002616!6.17e-26!59;UBERON:0002346!8.86e-26!90;UBERON:0000153!9.63e-26!129;UBERON:0007811!9.63e-26!129;UBERON:0000033!1.09e-24!123;UBERON:0003075!2.55e-24!86;UBERON:0007284!2.55e-24!86;UBERON:0000924!3.76e-23!173;UBERON:0006601!3.76e-23!173;UBERON:0000955!5.73e-23!69;UBERON:0006238!5.73e-23!69;UBERON:0003080!2.67e-22!42;UBERON:0004121!8.29e-22!169;UBERON:0002780!1.30e-21!41;UBERON:0001890!1.30e-21!41;UBERON:0006240!1.30e-21!41;UBERON:0001017!3.51e-21!82;UBERON:0005743!2.37e-20!86;UBERON:0000073!6.47e-20!94;UBERON:0001016!6.47e-20!94;UBERON:0003056!1.34e-18!61;UBERON:0001893!1.04e-16!34;UBERON:0002020!3.17e-16!34;UBERON:0003528!3.17e-16!34;UBERON:0002791!4.88e-16!33;UBERON:0001869!2.66e-15!32;UBERON:0002619!8.23e-14!22;UBERON:0000956!2.18e-12!25;UBERON:0000203!2.18e-12!25;UBERON:0001950!2.24e-12!20;UBERON:0000475!2.55e-12!365;UBERON:0000062!1.18e-11!511;UBERON:0000064!2.19e-10!219;UBERON:0000481!4.50e-09!347;UBERON:0000477!7.90e-08!286;UBERON:0004111!1.44e-07!241;UBERON:0003076!2.50e-07!15;UBERON:0003057!2.50e-07!15|ontology_enrichment_uberon_v019=UBERON:0002780;3.34e-21;41!UBERON:0001890;3.34e-21;41!UBERON:0001893;3.65e-19;34!UBERON:0002619;3.73e-19;22!UBERON:0001869;1.10e-18;32!UBERON:0002791;1.12e-18;32!UBERON:0000073;4.38e-18;53!UBERON:0002616;4.38e-18;53!UBERON:0003528;2.02e-17;34!UBERON:0002020;2.02e-17;34!UBERON:0001950;5.33e-17;20!UBERON:0000956;3.23e-16;25!UBERON:0000203;3.23e-16;25!UBERON:0007023;1.36e-11;114!UBERON:0000955;1.19e-10;68!UBERON:0001017;4.42e-10;75!UBERON:0001016;5.61e-10;83!UBERON:0000200;2.72e-08;6!UBERON:0001894;3.46e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.03e-44,114;UBERON:0001049,2.16e-32,56;UBERON:0005068,2.16e-32,56;UBERON:0006241,2.16e-32,56;UBERON:0007135,2.16e-32,56;UBERON:0000073,7.58e-30,53;UBERON:0002616,7.58e-30,53;UBERON:0002780,1.28e-28,41;UBERON:0001890,1.28e-28,41;UBERON:0003080,1.28e-28,41;UBERON:0006240,1.28e-28,41;UBERON:0010371,2.67e-26,104;UBERON:0003075,9.69e-24,82;UBERON:0007284,9.69e-24,82;UBERON:0002346,3.98e-23,86;UBERON:0001893,6.48e-23,34;UBERON:0000955,1.34e-22,68;UBERON:0006238,1.34e-22,68;UBERON:0001017,1.91e-21,81;UBERON:0001016,2.97e-21,89;UBERON:0004121,6.19e-21,171;UBERON:0000924,6.19e-21,171;UBERON:0006601,6.19e-21,171;UBERON:0002791,7.29e-21,32;UBERON:0001869,8.12e-21,32;UBERON:0003056,9.14e-21,61;UBERON:0003528,1.06e-20,34;UBERON:0002020,1.06e-20,34;UBERON:0002619,4.34e-19,22;UBERON:0001950,6.21e-17,20;UBERON:0010314,1.61e-16,132;UBERON:0000956,3.68e-16,25;UBERON:0000203,3.68e-16,25;UBERON:0011216,7.39e-12,223;UBERON:0000200,2.70e-08,6;UBERON:0004111,1.49e-07,240;UBERON:0001894,3.56e-07,7;UBERON:0006222,3.56e-07,7;UBERON:0000025,4.53e-07,192|phase1_expression=0,1.49870366723688,0,0,0.893922188854576,0,10.1319951267324,0,0.522371256399677,0,0,0,0,0.247532705920093,0,0,0,0,0,0.861847406537515,0,0.313454721478088,0.572471974262113,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0.175669571386252,7.00738053912763,2.18577172975525,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0.386521706326594,1.90922284413584,1.72082757233402,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,2.94848165003288,0.590789906681404,0,0.245976877086227,0,1.97550513735526,1.1240175325762,1.91005047582099,1.48141512253647,0,0,0,0.927443239800615,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,4.25325291727159,0,0,0,0,0,0,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.207970861530807,0.356857977594324,0.788512075169673,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.644566922551274,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.2111032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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23037 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18486 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000513852_5end | |||
|description=CAGE_peak_2_at_PDZD2_5end | |||
|id=chr5:31936230..31936265,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.08e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.39e-42!115;UBERON:0001049!1.96e-28!57;UBERON:0005068!1.96e-28!57;UBERON:0006241!1.96e-28!57;UBERON:0007135!1.96e-28!57;UBERON:0002616!6.17e-26!59;UBERON:0002346!8.86e-26!90;UBERON:0000153!9.63e-26!129;UBERON:0007811!9.63e-26!129;UBERON:0000033!1.09e-24!123;UBERON:0003075!2.55e-24!86;UBERON:0007284!2.55e-24!86;UBERON:0000924!3.76e-23!173;UBERON:0006601!3.76e-23!173;UBERON:0000955!5.73e-23!69;UBERON:0006238!5.73e-23!69;UBERON:0003080!2.67e-22!42;UBERON:0004121!8.29e-22!169;UBERON:0002780!1.30e-21!41;UBERON:0001890!1.30e-21!41;UBERON:0006240!1.30e-21!41;UBERON:0001017!3.51e-21!82;UBERON:0005743!2.37e-20!86;UBERON:0000073!6.47e-20!94;UBERON:0001016!6.47e-20!94;UBERON:0003056!1.34e-18!61;UBERON:0001893!1.04e-16!34;UBERON:0002020!3.17e-16!34;UBERON:0003528!3.17e-16!34;UBERON:0002791!4.88e-16!33;UBERON:0001869!2.66e-15!32;UBERON:0002619!8.23e-14!22;UBERON:0000956!2.18e-12!25;UBERON:0000203!2.18e-12!25;UBERON:0001950!2.24e-12!20;UBERON:0000475!2.55e-12!365;UBERON:0000062!1.18e-11!511;UBERON:0000064!2.19e-10!219;UBERON:0000481!4.50e-09!347;UBERON:0000477!7.90e-08!286;UBERON:0004111!1.44e-07!241;UBERON:0003076!2.50e-07!15;UBERON:0003057!2.50e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.34e-21;41!UBERON:0001890;3.34e-21;41!UBERON:0001893;3.65e-19;34!UBERON:0002619;3.73e-19;22!UBERON:0001869;1.10e-18;32!UBERON:0002791;1.12e-18;32!UBERON:0000073;4.38e-18;53!UBERON:0002616;4.38e-18;53!UBERON:0003528;2.02e-17;34!UBERON:0002020;2.02e-17;34!UBERON:0001950;5.33e-17;20!UBERON:0000956;3.23e-16;25!UBERON:0000203;3.23e-16;25!UBERON:0007023;1.36e-11;114!UBERON:0000955;1.19e-10;68!UBERON:0001017;4.42e-10;75!UBERON:0001016;5.61e-10;83!UBERON:0000200;2.72e-08;6!UBERON:0001894;3.46e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.03e-44,114;UBERON:0001049,2.16e-32,56;UBERON:0005068,2.16e-32,56;UBERON:0006241,2.16e-32,56;UBERON:0007135,2.16e-32,56;UBERON:0000073,7.58e-30,53;UBERON:0002616,7.58e-30,53;UBERON:0002780,1.28e-28,41;UBERON:0001890,1.28e-28,41;UBERON:0003080,1.28e-28,41;UBERON:0006240,1.28e-28,41;UBERON:0010371,2.67e-26,104;UBERON:0003075,9.69e-24,82;UBERON:0007284,9.69e-24,82;UBERON:0002346,3.98e-23,86;UBERON:0001893,6.48e-23,34;UBERON:0000955,1.34e-22,68;UBERON:0006238,1.34e-22,68;UBERON:0001017,1.91e-21,81;UBERON:0001016,2.97e-21,89;UBERON:0004121,6.19e-21,171;UBERON:0000924,6.19e-21,171;UBERON:0006601,6.19e-21,171;UBERON:0002791,7.29e-21,32;UBERON:0001869,8.12e-21,32;UBERON:0003056,9.14e-21,61;UBERON:0003528,1.06e-20,34;UBERON:0002020,1.06e-20,34;UBERON:0002619,4.34e-19,22;UBERON:0001950,6.21e-17,20;UBERON:0010314,1.61e-16,132;UBERON:0000956,3.68e-16,25;UBERON:0000203,3.68e-16,25;UBERON:0011216,7.39e-12,223;UBERON:0000200,2.70e-08,6;UBERON:0004111,1.49e-07,240;UBERON:0001894,3.56e-07,7;UBERON:0006222,3.56e-07,7;UBERON:0000025,4.53e-07,192 | |||
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| |||
|short_description=p2@PDZD2 | |||
}} |
Revision as of 15:24, 13 September 2013
Short description: | p2@PDZD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PDZD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000513852_5end |
EntrezGene: | PDZD2 |
HGNC: | 18486 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.