FFCP PHASE1:Mm9::chr17:85076302..85076305,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=120|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:85076302..85076305,-|id=chr17:85076302..85076305,-|ontology_enrichment_celltype=CL:0000066!3.99e-08!25;CL:0000473!6.62e-08!3;CL:0000627!6.62e-08!3;CL:0000682!6.62e-08!3;CL:0002563!8.67e-07!9;CL:0002251!8.67e-07!9|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!9.89e-14!43;UBERON:0002107!1.65e-12!22;UBERON:0007499!1.65e-12!22;UBERON:0006925!1.65e-12!22;UBERON:0009497!1.65e-12!22;UBERON:0000015!1.65e-12!22;UBERON:0002423!1.65e-12!22;UBERON:0006235!1.65e-12!22;UBERON:0008835!1.65e-12!22;UBERON:0003894!1.65e-12!22;UBERON:0004161!1.65e-12!22;UBERON:0008836!1.65e-12!22;UBERON:0009854!7.28e-12!23;UBERON:0009856!7.28e-12!23;UBERON:0004921!1.92e-11!126;UBERON:0004185!1.92e-11!126;UBERON:0001007!3.65e-11!128;UBERON:0001555!3.65e-11!128;UBERON:0007026!3.65e-11!128;UBERON:0004119!6.79e-11!130;UBERON:0000925!6.79e-11!130;UBERON:0006595!6.79e-11!130;UBERON:0002365!9.92e-11!25;UBERON:0002330!9.92e-11!25;UBERON:0005409!3.58e-10!59;UBERON:0003929!1.28e-08!55;UBERON:0003350!8.67e-07!9;UBERON:0004808!8.67e-07!9;UBERON:0001277!8.67e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.46e-09,31;UBERON:0002107,4.08e-09,22;UBERON:0007499,4.08e-09,22;UBERON:0006925,4.08e-09,22;UBERON:0009497,4.08e-09,22;UBERON:0000015,4.08e-09,22;UBERON:0002423,4.08e-09,22;UBERON:0006235,4.08e-09,22;UBERON:0008835,4.08e-09,22;UBERON:0003894,4.08e-09,22;UBERON:0004161,4.08e-09,22;UBERON:0008836,4.08e-09,22;UBERON:0009854,1.02e-08,23;UBERON:0009856,1.02e-08,23;UBERON:0002365,5.06e-08,25;UBERON:0002330,5.06e-08,25;UBERON:0004921,9.12e-08,114;UBERON:0001007,1.29e-07,116;UBERON:0001555,1.29e-07,116;UBERON:0007026,1.29e-07,116;UBERON:0004119,1.79e-07,118;UBERON:0000925,1.79e-07,118;UBERON:0006595,1.79e-07,118|phase1_expression=0,0.348975407639361,0.909998478779072,0.90739263392049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,2.64450566663544,0,0,0,0.201683524623343,0,0,1.89811624617805,0.164698954724011,1.25667604400135,0.795825888164603,0.38992817423824,0,4.75503709724327,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,1.78348749452539,1.64736847912849,0,0.372140947668503,2.49630138491648,2.02063102357689,0.717589654087649,13.0259750768109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:85076302..85076305,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=120 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:85076302..85076305,- | |||
|id=chr17:85076302..85076305,- | |||
|ontology_enrichment_celltype=CL:0000066!3.99e-08!25;CL:0000473!6.62e-08!3;CL:0000627!6.62e-08!3;CL:0000682!6.62e-08!3;CL:0002563!8.67e-07!9;CL:0002251!8.67e-07!9 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.89e-14!43;UBERON:0002107!1.65e-12!22;UBERON:0007499!1.65e-12!22;UBERON:0006925!1.65e-12!22;UBERON:0009497!1.65e-12!22;UBERON:0000015!1.65e-12!22;UBERON:0002423!1.65e-12!22;UBERON:0006235!1.65e-12!22;UBERON:0008835!1.65e-12!22;UBERON:0003894!1.65e-12!22;UBERON:0004161!1.65e-12!22;UBERON:0008836!1.65e-12!22;UBERON:0009854!7.28e-12!23;UBERON:0009856!7.28e-12!23;UBERON:0004921!1.92e-11!126;UBERON:0004185!1.92e-11!126;UBERON:0001007!3.65e-11!128;UBERON:0001555!3.65e-11!128;UBERON:0007026!3.65e-11!128;UBERON:0004119!6.79e-11!130;UBERON:0000925!6.79e-11!130;UBERON:0006595!6.79e-11!130;UBERON:0002365!9.92e-11!25;UBERON:0002330!9.92e-11!25;UBERON:0005409!3.58e-10!59;UBERON:0003929!1.28e-08!55;UBERON:0003350!8.67e-07!9;UBERON:0004808!8.67e-07!9;UBERON:0001277!8.67e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.46e-09,31;UBERON:0002107,4.08e-09,22;UBERON:0007499,4.08e-09,22;UBERON:0006925,4.08e-09,22;UBERON:0009497,4.08e-09,22;UBERON:0000015,4.08e-09,22;UBERON:0002423,4.08e-09,22;UBERON:0006235,4.08e-09,22;UBERON:0008835,4.08e-09,22;UBERON:0003894,4.08e-09,22;UBERON:0004161,4.08e-09,22;UBERON:0008836,4.08e-09,22;UBERON:0009854,1.02e-08,23;UBERON:0009856,1.02e-08,23;UBERON:0002365,5.06e-08,25;UBERON:0002330,5.06e-08,25;UBERON:0004921,9.12e-08,114;UBERON:0001007,1.29e-07,116;UBERON:0001555,1.29e-07,116;UBERON:0007026,1.29e-07,116;UBERON:0004119,1.79e-07,118;UBERON:0000925,1.79e-07,118;UBERON:0006595,1.79e-07,118 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,0.90739263392049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57423196411502,0.430761996159075,0.430942465371778,0,0,0,0,0,0,0,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63460661282178,2.64450566663544,0,0,0,0.201683524623343,0,0,1.89811624617805,0.164698954724011,1.25667604400135,0.795825888164603,0.38992817423824,0,4.75503709724327,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0,0,0,0,0,0,0,1.78348749452539,1.64736847912849,0,0.372140947668503,2.49630138491648,2.02063102357689,0.717589654087649,13.0259750768109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:85076302..85076305,- | |||
}} |
Revision as of 15:29, 13 September 2013
Short description: | p@chr17:85076302..85076305, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:85076302..85076305, - |
Coexpression cluster: | MCL_coexpression_mm9:120 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.46e-09 | 31 |
liver | 4.08e-09 | 22 |
epithelial sac | 4.08e-09 | 22 |
digestive gland | 4.08e-09 | 22 |
epithelium of foregut-midgut junction | 4.08e-09 | 22 |
anatomical boundary | 4.08e-09 | 22 |
hepatobiliary system | 4.08e-09 | 22 |
foregut-midgut junction | 4.08e-09 | 22 |
hepatic diverticulum | 4.08e-09 | 22 |
liver primordium | 4.08e-09 | 22 |
septum transversum | 4.08e-09 | 22 |
liver bud | 4.08e-09 | 22 |
digestive tract diverticulum | 1.02e-08 | 23 |
sac | 1.02e-08 | 23 |
exocrine gland | 5.06e-08 | 25 |
exocrine system | 5.06e-08 | 25 |
subdivision of digestive tract | 9.12e-08 | 114 |
digestive system | 1.29e-07 | 116 |
digestive tract | 1.29e-07 | 116 |
primitive gut | 1.29e-07 | 116 |
endoderm-derived structure | 1.79e-07 | 118 |
endoderm | 1.79e-07 | 118 |
presumptive endoderm | 1.79e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.