FFCP PHASE1:Mm9::chr17:90855283..90855366,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=18189|HGNC=|MCL_coexpression_id=2|UniProt=P0DI97|association_with_transcript=-57bp_to_ENSMUST00000172466_5end|description=CAGE_peak_2_at_Nrxn1_5end|id=chr17:90855283..90855366,-|ontology_enrichment_celltype=CL:0000540!1.65e-13!33;CL:0000047!1.65e-13!33;CL:0000031!1.65e-13!33;CL:0000404!1.65e-13!33;CL:0000117!3.75e-13!23;CL:0000337!3.75e-13!23;CL:0002319!6.57e-10!43;CL:0000221!1.06e-09!44;CL:0000133!1.06e-09!44;CL:0000393!2.84e-09!39;CL:0000211!2.84e-09!39|ontology_enrichment_celltype_v019_2=CL:0000540,5.13e-16,33;CL:0000047,5.13e-16,33;CL:0000031,5.13e-16,33;CL:0000404,5.13e-16,33;CL:0000117,7.64e-16,23;CL:0000337,7.64e-16,23;CL:0000393,1.16e-11,39;CL:0000211,1.16e-11,39;CL:0002319,1.09e-10,43;CL:0000221,3.55e-10,44;CL:0000133,3.55e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.07e-25!73;UBERON:0005743!2.07e-25!73;UBERON:0000073!6.99e-25!75;UBERON:0001016!6.99e-25!75;UBERON:0001049!5.83e-22!52;UBERON:0005068!5.83e-22!52;UBERON:0006241!5.83e-22!52;UBERON:0007135!5.83e-22!52;UBERON:0002346!7.94e-22!71;UBERON:0003075!7.94e-22!71;UBERON:0007284!7.94e-22!71;UBERON:0000955!1.47e-20!50;UBERON:0006238!1.47e-20!50;UBERON:0002616!5.46e-20!49;UBERON:0000033!9.20e-20!63;UBERON:0004121!1.31e-19!102;UBERON:0000924!1.31e-19!102;UBERON:0006601!1.31e-19!102;UBERON:0002020!2.50e-19!34;UBERON:0003056!1.53e-18!49;UBERON:0003080!5.10e-17!40;UBERON:0002780!1.99e-16!39;UBERON:0001890!1.99e-16!39;UBERON:0006240!1.99e-16!39;UBERON:0002791!4.06e-16!29;UBERON:0003528!4.06e-16!29;UBERON:0001893!4.06e-16!29;UBERON:0000956!4.67e-12!21;UBERON:0001869!4.67e-12!21;UBERON:0000203!4.67e-12!21;UBERON:0000153!1.31e-10!94;UBERON:0002619!2.46e-10!17;UBERON:0007811!1.14e-09!86;UBERON:0002021!1.27e-08!10;UBERON:0000411!1.27e-08!10;UBERON:0001950!1.27e-08!10;UBERON:0000468!6.83e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.96e-29,73;UBERON:0001016,6.07e-28,75;UBERON:0002346,6.12e-28,64;UBERON:0003075,6.12e-28,64;UBERON:0007284,6.12e-28,64;UBERON:0000073,8.29e-27,54;UBERON:0001049,3.55e-25,52;UBERON:0005068,3.55e-25,52;UBERON:0006241,3.55e-25,52;UBERON:0007135,3.55e-25,52;UBERON:0004121,2.92e-23,95;UBERON:0000924,2.92e-23,95;UBERON:0006601,2.92e-23,95;UBERON:0002020,2.12e-22,34;UBERON:0010371,1.42e-21,73;UBERON:0000955,2.96e-21,47;UBERON:0006238,2.96e-21,47;UBERON:0002616,1.41e-20,46;UBERON:0003056,3.70e-20,49;UBERON:0003080,7.94e-19,40;UBERON:0003528,1.82e-18,29;UBERON:0002791,1.82e-18,29;UBERON:0001893,1.82e-18,29;UBERON:0002780,4.11e-18,39;UBERON:0001890,4.11e-18,39;UBERON:0006240,4.11e-18,39;UBERON:0010314,2.85e-14,92;UBERON:0000956,1.77e-13,21;UBERON:0001869,1.77e-13,21;UBERON:0000203,1.77e-13,21;UBERON:0002619,2.38e-11,17;UBERON:0002021,2.91e-10,10;UBERON:0000411,2.91e-10,10;UBERON:0001950,2.91e-10,10;UBERON:0003076,6.50e-07,12;UBERON:0003057,6.50e-07,12|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.315462165358238,0.411343300817216,0.84877930359606,12.5013636522073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.219686182734472,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0,25.4918740683093,35.4423956112262,24.719424736741,0.677689064138264,0,0.449949858640699,0,0,0,0,12.4427534770173,8.77538599155989,9.04397333810943,27.4224945027651,40.4189429941453,44.5866509142433,17.9231030804102,22.9804696652505,23.1243350098716,35.7524546638526,31.7965523840424,23.6076455037047,13.2657083223494,32.8175423450759,8.37548997004143,11.2552522006336,16.9606055032259,52.7385167997865,63.3553979556008,43.431070877295,0.075726193333184,0.755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.5709193985953,0,0,1.73485326766136,0,0.922461989024234,0.301445281105245,0.823120949949934,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,72.6096376588637,110.168967783877,0,0,0,0,27.7112682898922,26.992535566299,53.780062704306,134.36619950863,141.154932446342,34.9083914860061,44.2918648174978,1.32391173005411,0.248813941220186,0,0.631325567659422,4.94457683258274,4.36813998423599,7.56260945182467,3.61691562805716,4.69451844144162,6.53379973452734,4.8724896771059,3.3631438196072,1.07783996466421,3.78212160335639,5.10258260075452,7.01426343768239,4.72680323683516,3.48252166522167,2.67516777330327,1.39323986772945,0,0,0,0.621377317606506,2.11073453982987,0.900310307305074,1.42046841351126,0.787056926989615,0.617068451549513,0,0,0.233530684734339,0.329119699826961,0,0.0810688095458557,0,0.219550115291051,0,79.6998905058042,73.0622747892919,0,0,2.77274725695804,0.696710015581316,0.515469845288373,0.403367049246685,0,0,0,0.329397909448022,0.251335208800269,0,0.58489226135736,0,0,0,3.03468641524931,2.28497025219458,3.38123207019241,2.44381593414377,1.55161989734101,1.40271639780637,0.379419222745544,0,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,1.13694847062291,0.814824882210129,0.509235257325564,0.938760993154008,0.335012514883631,0,0,0.315270288212382,1.10732344824387,0.956728611944923,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,11.0779907091576,8.90808818100744,0,0,6.62567260774139,8.98009111882268,7.32439552291516,3.10659437338318,2.89638276307112,1.13230612315533,1.61924280669958,2.92255857911312,1.18586333383957,21.5285282002611,0,0.890328018336276,0.977321756121456,0,0,3.39892890616974,2.41858845571801,0.188605079755898,0.590603785761546,0.922305443831782,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,3.42116078659489,0.388076051348264,3.21505552547388,4.78818630834139,4.28085162244969,5.75921572107423,0.608929898229199,0,0,0,0.16488625294148,0,0.663442174209714,0,0.164140899745061,0,14.0923229527987,0.341741761595705,20.6386867963223,6.48180845793991,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,0,1.10717597753397,2.84647253977588,1.51207477150522,1.04544148007234,0.655087691238533,0.809186078308924,0.661227645802687,0,0,0,0,0.897099276263873,0.330916980914195,1.55560950675238,0.387479470433193,1.18269287843545,0.117357238645754,0.911430693907651,0.209718688851422,0,0,0,0.405450430580328,1.33524244314275,0.77952493786677,0.358053391334963,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,1.92931541171159,0,142.882216182118,177.68554129177,179.316295706531,213.269799288516,168.530299863578,198.668595013491,184.281142563283,150.40728187689,169.475260960092,156.881374460801,1.14166082342594,8.77854721482268,9.90254913373978,14.5864030240976,5.8691685535835,8.82448840560068,6.22290837844523,9.06554251851134,8.66481865897901,12.8875577999537,12.4204856946217,13.2038438970253,7.95952813494,9.02754648908657,8.2132720606527,7.62069906052918,9.96605203125757,7.33055037762079,9.89006161927936,8.24313952752625,12.6861623382604,6.92155644021416,9.53744759789284,10.174249164263,11.387235030255,10.1537529470012,9.87811053512972,7.3659519202596,10.0495044245938,10.1005608898393,9.96534152243063,6.69830480153832,8.18462086339379,10.8455788830176,12.1531164918119,17.7365510335942,11.2287172053796,8.59484216193193,5.7386499620653,2.20591419119516,1.15933917810211|short_description=p2@Nrxn1}} | ||
|EntrezGene=18189 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=P0DI97 | |||
|association_with_transcript=-57bp_to_ENSMUST00000172466_5end | |||
|description=CAGE_peak_2_at_Nrxn1_5end | |||
|id=chr17:90855283..90855366,- | |||
|ontology_enrichment_celltype=CL:0000540!1.65e-13!33;CL:0000047!1.65e-13!33;CL:0000031!1.65e-13!33;CL:0000404!1.65e-13!33;CL:0000117!3.75e-13!23;CL:0000337!3.75e-13!23;CL:0002319!6.57e-10!43;CL:0000221!1.06e-09!44;CL:0000133!1.06e-09!44;CL:0000393!2.84e-09!39;CL:0000211!2.84e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.13e-16,33;CL:0000047,5.13e-16,33;CL:0000031,5.13e-16,33;CL:0000404,5.13e-16,33;CL:0000117,7.64e-16,23;CL:0000337,7.64e-16,23;CL:0000393,1.16e-11,39;CL:0000211,1.16e-11,39;CL:0002319,1.09e-10,43;CL:0000221,3.55e-10,44;CL:0000133,3.55e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.07e-25!73;UBERON:0005743!2.07e-25!73;UBERON:0000073!6.99e-25!75;UBERON:0001016!6.99e-25!75;UBERON:0001049!5.83e-22!52;UBERON:0005068!5.83e-22!52;UBERON:0006241!5.83e-22!52;UBERON:0007135!5.83e-22!52;UBERON:0002346!7.94e-22!71;UBERON:0003075!7.94e-22!71;UBERON:0007284!7.94e-22!71;UBERON:0000955!1.47e-20!50;UBERON:0006238!1.47e-20!50;UBERON:0002616!5.46e-20!49;UBERON:0000033!9.20e-20!63;UBERON:0004121!1.31e-19!102;UBERON:0000924!1.31e-19!102;UBERON:0006601!1.31e-19!102;UBERON:0002020!2.50e-19!34;UBERON:0003056!1.53e-18!49;UBERON:0003080!5.10e-17!40;UBERON:0002780!1.99e-16!39;UBERON:0001890!1.99e-16!39;UBERON:0006240!1.99e-16!39;UBERON:0002791!4.06e-16!29;UBERON:0003528!4.06e-16!29;UBERON:0001893!4.06e-16!29;UBERON:0000956!4.67e-12!21;UBERON:0001869!4.67e-12!21;UBERON:0000203!4.67e-12!21;UBERON:0000153!1.31e-10!94;UBERON:0002619!2.46e-10!17;UBERON:0007811!1.14e-09!86;UBERON:0002021!1.27e-08!10;UBERON:0000411!1.27e-08!10;UBERON:0001950!1.27e-08!10;UBERON:0000468!6.83e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.96e-29,73;UBERON:0001016,6.07e-28,75;UBERON:0002346,6.12e-28,64;UBERON:0003075,6.12e-28,64;UBERON:0007284,6.12e-28,64;UBERON:0000073,8.29e-27,54;UBERON:0001049,3.55e-25,52;UBERON:0005068,3.55e-25,52;UBERON:0006241,3.55e-25,52;UBERON:0007135,3.55e-25,52;UBERON:0004121,2.92e-23,95;UBERON:0000924,2.92e-23,95;UBERON:0006601,2.92e-23,95;UBERON:0002020,2.12e-22,34;UBERON:0010371,1.42e-21,73;UBERON:0000955,2.96e-21,47;UBERON:0006238,2.96e-21,47;UBERON:0002616,1.41e-20,46;UBERON:0003056,3.70e-20,49;UBERON:0003080,7.94e-19,40;UBERON:0003528,1.82e-18,29;UBERON:0002791,1.82e-18,29;UBERON:0001893,1.82e-18,29;UBERON:0002780,4.11e-18,39;UBERON:0001890,4.11e-18,39;UBERON:0006240,4.11e-18,39;UBERON:0010314,2.85e-14,92;UBERON:0000956,1.77e-13,21;UBERON:0001869,1.77e-13,21;UBERON:0000203,1.77e-13,21;UBERON:0002619,2.38e-11,17;UBERON:0002021,2.91e-10,10;UBERON:0000411,2.91e-10,10;UBERON:0001950,2.91e-10,10;UBERON:0003076,6.50e-07,12;UBERON:0003057,6.50e-07,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.315462165358238,0.411343300817216,0.84877930359606,12.5013636522073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.219686182734472,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0,25.4918740683093,35.4423956112262,24.719424736741,0.677689064138264,0,0.449949858640699,0,0,0,0,12.4427534770173,8.77538599155989,9.04397333810943,27.4224945027651,40.4189429941453,44.5866509142433,17.9231030804102,22.9804696652505,23.1243350098716,35.7524546638526,31.7965523840424,23.6076455037047,13.2657083223494,32.8175423450759,8.37548997004143,11.2552522006336,16.9606055032259,52.7385167997865,63.3553979556008,43.431070877295,0.075726193333184,0.755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.5709193985953,0,0,1.73485326766136,0,0.922461989024234,0.301445281105245,0.823120949949934,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,72.6096376588637,110.168967783877,0,0,0,0,27.7112682898922,26.992535566299,53.780062704306,134.36619950863,141.154932446342,34.9083914860061,44.2918648174978,1.32391173005411,0.248813941220186,0,0.631325567659422,4.94457683258274,4.36813998423599,7.56260945182467,3.61691562805716,4.69451844144162,6.53379973452734,4.8724896771059,3.3631438196072,1.07783996466421,3.78212160335639,5.10258260075452,7.01426343768239,4.72680323683516,3.48252166522167,2.67516777330327,1.39323986772945,0,0,0,0.621377317606506,2.11073453982987,0.900310307305074,1.42046841351126,0.787056926989615,0.617068451549513,0,0,0.233530684734339,0.329119699826961,0,0.0810688095458557,0,0.219550115291051,0,79.6998905058042,73.0622747892919,0,0,2.77274725695804,0.696710015581316,0.515469845288373,0.403367049246685,0,0,0,0.329397909448022,0.251335208800269,0,0.58489226135736,0,0,0,3.03468641524931,2.28497025219458,3.38123207019241,2.44381593414377,1.55161989734101,1.40271639780637,0.379419222745544,0,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,1.13694847062291,0.814824882210129,0.509235257325564,0.938760993154008,0.335012514883631,0,0,0.315270288212382,1.10732344824387,0.956728611944923,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,11.0779907091576,8.90808818100744,0,0,6.62567260774139,8.98009111882268,7.32439552291516,3.10659437338318,2.89638276307112,1.13230612315533,1.61924280669958,2.92255857911312,1.18586333383957,21.5285282002611,0,0.890328018336276,0.977321756121456,0,0,3.39892890616974,2.41858845571801,0.188605079755898,0.590603785761546,0.922305443831782,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,3.42116078659489,0.388076051348264,3.21505552547388,4.78818630834139,4.28085162244969,5.75921572107423,0.608929898229199,0,0,0,0.16488625294148,0,0.663442174209714,0,0.164140899745061,0,14.0923229527987,0.341741761595705,20.6386867963223,6.48180845793991,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,0,1.10717597753397,2.84647253977588,1.51207477150522,1.04544148007234,0.655087691238533,0.809186078308924,0.661227645802687,0,0,0,0,0.897099276263873,0.330916980914195,1.55560950675238,0.387479470433193,1.18269287843545,0.117357238645754,0.911430693907651,0.209718688851422,0,0,0,0.405450430580328,1.33524244314275,0.77952493786677,0.358053391334963,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,1.92931541171159,0,142.882216182118,177.68554129177,179.316295706531,213.269799288516,168.530299863578,198.668595013491,184.281142563283,150.40728187689,169.475260960092,156.881374460801,1.14166082342594,8.77854721482268,9.90254913373978,14.5864030240976,5.8691685535835,8.82448840560068,6.22290837844523,9.06554251851134,8.66481865897901,12.8875577999537,12.4204856946217,13.2038438970253,7.95952813494,9.02754648908657,8.2132720606527,7.62069906052918,9.96605203125757,7.33055037762079,9.89006161927936,8.24313952752625,12.6861623382604,6.92155644021416,9.53744759789284,10.174249164263,11.387235030255,10.1537529470012,9.87811053512972,7.3659519202596,10.0495044245938,10.1005608898393,9.96534152243063,6.69830480153832,8.18462086339379,10.8455788830176,12.1531164918119,17.7365510335942,11.2287172053796,8.59484216193193,5.7386499620653,2.20591419119516,1.15933917810211 | |||
|short_description=p2@Nrxn1 | |||
}} |
Revision as of 15:38, 13 September 2013
Short description: | p2@Nrxn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nrxn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | -57bp_to_ENSMUST00000172466_5end |
EntrezGene: | Nrxn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.13e-16 | 33 |
neuronal stem cell | 5.13e-16 | 33 |
neuroblast | 5.13e-16 | 33 |
electrically signaling cell | 5.13e-16 | 33 |
CNS neuron (sensu Vertebrata) | 7.64e-16 | 23 |
neuroblast (sensu Vertebrata) | 7.64e-16 | 23 |
electrically responsive cell | 1.16e-11 | 39 |
electrically active cell | 1.16e-11 | 39 |
neural cell | 1.09e-10 | 43 |
ectodermal cell | 3.55e-10 | 44 |
neurectodermal cell | 3.55e-10 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.