FFCP PHASE1:Mm9::chr19:22522609..22522635,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=226025|HGNC=|MCL_coexpression_id=39|UniProt=B2RUS0|association_with_transcript=-62bp_to_NM_177341,uc008gzo.1_5end|description=CAGE_peak_4_at_Trpm3_5end|id=chr19:22522609..22522635,+|ontology_enrichment_celltype=CL:0000117!2.55e-11!23;CL:0000337!2.55e-11!23;CL:0000540!1.08e-08!33;CL:0000047!1.08e-08!33;CL:0000031!1.08e-08!33;CL:0000404!1.08e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,8.45e-15,23;CL:0000337,8.45e-15,23;CL:0000540,2.00e-10,33;CL:0000047,2.00e-10,33;CL:0000031,2.00e-10,33;CL:0000404,2.00e-10,33;CL:0000393,7.93e-08,39;CL:0000211,7.93e-08,39;CL:0000221,3.46e-07,44;CL:0000133,3.46e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.05e-24!63;UBERON:0002346!7.28e-24!71;UBERON:0003075!7.28e-24!71;UBERON:0007284!7.28e-24!71;UBERON:0001049!2.15e-22!52;UBERON:0005068!2.15e-22!52;UBERON:0006241!2.15e-22!52;UBERON:0007135!2.15e-22!52;UBERON:0004121!2.61e-22!102;UBERON:0000924!2.61e-22!102;UBERON:0006601!2.61e-22!102;UBERON:0001017!2.29e-21!73;UBERON:0005743!2.29e-21!73;UBERON:0000955!1.04e-20!50;UBERON:0006238!1.04e-20!50;UBERON:0003056!3.65e-20!49;UBERON:0000073!4.16e-20!75;UBERON:0001016!4.16e-20!75;UBERON:0002616!7.18e-20!49;UBERON:0002020!7.36e-18!34;UBERON:0003080!1.68e-16!40;UBERON:0002780!7.89e-16!39;UBERON:0001890!7.89e-16!39;UBERON:0006240!7.89e-16!39;UBERON:0002791!3.30e-14!29;UBERON:0003528!3.30e-14!29;UBERON:0001893!3.30e-14!29;UBERON:0000153!1.90e-13!94;UBERON:0007811!5.08e-12!86;UBERON:0000956!3.75e-10!21;UBERON:0001869!3.75e-10!21;UBERON:0000203!3.75e-10!21;UBERON:0002021!3.38e-09!10;UBERON:0000411!3.38e-09!10;UBERON:0001950!3.38e-09!10;UBERON:0002619!9.81e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.64e-26,54;UBERON:0002346,1.79e-25,64;UBERON:0003075,1.79e-25,64;UBERON:0007284,1.79e-25,64;UBERON:0001049,8.63e-25,52;UBERON:0005068,8.63e-25,52;UBERON:0006241,8.63e-25,52;UBERON:0007135,8.63e-25,52;UBERON:0001017,2.01e-24,73;UBERON:0002020,1.12e-23,34;UBERON:0001016,2.43e-23,75;UBERON:0010371,3.10e-23,73;UBERON:0004121,1.12e-22,95;UBERON:0000924,1.12e-22,95;UBERON:0006601,1.12e-22,95;UBERON:0000955,6.18e-20,47;UBERON:0006238,6.18e-20,47;UBERON:0002616,7.34e-19,46;UBERON:0003056,1.09e-18,49;UBERON:0003528,1.87e-18,29;UBERON:0002791,1.87e-18,29;UBERON:0001893,1.87e-18,29;UBERON:0003080,3.49e-16,40;UBERON:0002780,2.59e-15,39;UBERON:0001890,2.59e-15,39;UBERON:0006240,2.59e-15,39;UBERON:0010314,2.95e-15,92;UBERON:0000956,1.22e-12,21;UBERON:0001869,1.22e-12,21;UBERON:0000203,1.22e-12,21;UBERON:0002021,1.25e-12,10;UBERON:0000411,1.25e-12,10;UBERON:0001950,1.25e-12,10;UBERON:0002619,8.84e-12,17;UBERON:0003076,1.59e-09,12;UBERON:0003057,1.59e-09,12;UBERON:0002240,1.21e-07,6;UBERON:0005174,1.21e-07,6;UBERON:0001137,1.21e-07,6;UBERON:0002420,4.39e-07,8;UBERON:0007245,4.39e-07,8;UBERON:0010009,4.39e-07,8;UBERON:0010011,4.39e-07,8;UBERON:0000454,4.39e-07,8|phase1_expression=2.88267924788629,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,1.45165457231869,0.810035629990144,1.05162480675691,4.57041575046086,4.8591079009355,1.5923803897944,1.0543001812006,0,3.30347642998166,4.21368215681119,3.22573719838111,2.1101806036831,3.56801810049398,1.56274011167028,1.67509799400829,6.19038871034848,2.90316670775939,12.9636577608414,8.54230084794618,5.03278503728312,0,0,0,0,0,0,0,0,0,0,0,0,8.87313544593087,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,0.913396434936424,0,0.150722640552623,0.705532242814229,0.125666591329675,0,0,0,0,0,0,0,33.6697916563279,27.0186251789357,0,0,0,0,4.6435098215495,1.83000241127451,3.01570445070875,5.73620256634512,4.85859368927628,4.1557608911912,4.38051410282946,2.24046600470696,0.373220911830279,0.252722758433675,0.841767423545896,0.130120442962704,0.459804208866946,1.44049703844279,2.41127708537144,2.65342346690179,2.69038812598185,3.93547243150861,3.62184719034622,0.215567992932842,0.567318240503458,2.11141348996739,0.876782929710299,2.22437799380478,0.696504333044333,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0.134206418760372,14.7202963994889,4.52780294468852,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.651859905768103,1.01847051465113,1.17345124144251,0.502518772325447,0,0,0.315270288212382,0,0,0,0,0,0,0,0,0,5.77982123956051,5.04010252346474,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,1.18586333383957,19.921921618152,0,0,0.488660878060728,0.329940245945071,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0.540183282093931,0.517434735131018,0.428674070063185,0,1.24858172321449,0.987294123612726,0.304464949114599,0,0,0,0.49465875882444,0,0.120625849856312,0.119372344003136,0.328281799490123,0.291480836629851,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.387479470433193,0.168956125490778,0.469428954583016,0.39061315453185,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2950368523413,11.0478056761722,12.6037012956667,8.93636548187176,10.9613203163303,9.06472676867641,8.10027000278167,9.45674526770863,6.34399372577886,6.21312374102184,0,0,1.19513524027894,1.70174701947806,0.419226325255965,1.2869045591501,1.77797382241292,2.67845574410562,2.56735367673452,2.52697211763797,1.77435509923168,2.64076877940507,1.96647165686753,1.85672941974121,2.12511235135769,1.90517476513229,0.927074607558844,0.77163688185482,3.29668720642645,2.20798380201596,1.71434626192708,1.77475806159337,1.43061713968393,1.45346416632329,2.4468438907986,1.94613598150856,1.28049581010941,1.31534855718921,1.62964936615034,2.80571135828869,1.77952527186261,1.37906275325789,0.818462086339379,1.54936841185966,2.12197272079256,2.24829520144151,1.63752125911786,0.859484216193193,0.765153328275374,0.441182838239031,0.463735671240843|short_description=p4@Trpm3}} | ||
|EntrezGene=226025 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt=B2RUS0 | |||
|association_with_transcript=-62bp_to_NM_177341,uc008gzo.1_5end | |||
|description=CAGE_peak_4_at_Trpm3_5end | |||
|id=chr19:22522609..22522635,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.55e-11!23;CL:0000337!2.55e-11!23;CL:0000540!1.08e-08!33;CL:0000047!1.08e-08!33;CL:0000031!1.08e-08!33;CL:0000404!1.08e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.45e-15,23;CL:0000337,8.45e-15,23;CL:0000540,2.00e-10,33;CL:0000047,2.00e-10,33;CL:0000031,2.00e-10,33;CL:0000404,2.00e-10,33;CL:0000393,7.93e-08,39;CL:0000211,7.93e-08,39;CL:0000221,3.46e-07,44;CL:0000133,3.46e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.05e-24!63;UBERON:0002346!7.28e-24!71;UBERON:0003075!7.28e-24!71;UBERON:0007284!7.28e-24!71;UBERON:0001049!2.15e-22!52;UBERON:0005068!2.15e-22!52;UBERON:0006241!2.15e-22!52;UBERON:0007135!2.15e-22!52;UBERON:0004121!2.61e-22!102;UBERON:0000924!2.61e-22!102;UBERON:0006601!2.61e-22!102;UBERON:0001017!2.29e-21!73;UBERON:0005743!2.29e-21!73;UBERON:0000955!1.04e-20!50;UBERON:0006238!1.04e-20!50;UBERON:0003056!3.65e-20!49;UBERON:0000073!4.16e-20!75;UBERON:0001016!4.16e-20!75;UBERON:0002616!7.18e-20!49;UBERON:0002020!7.36e-18!34;UBERON:0003080!1.68e-16!40;UBERON:0002780!7.89e-16!39;UBERON:0001890!7.89e-16!39;UBERON:0006240!7.89e-16!39;UBERON:0002791!3.30e-14!29;UBERON:0003528!3.30e-14!29;UBERON:0001893!3.30e-14!29;UBERON:0000153!1.90e-13!94;UBERON:0007811!5.08e-12!86;UBERON:0000956!3.75e-10!21;UBERON:0001869!3.75e-10!21;UBERON:0000203!3.75e-10!21;UBERON:0002021!3.38e-09!10;UBERON:0000411!3.38e-09!10;UBERON:0001950!3.38e-09!10;UBERON:0002619!9.81e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.64e-26,54;UBERON:0002346,1.79e-25,64;UBERON:0003075,1.79e-25,64;UBERON:0007284,1.79e-25,64;UBERON:0001049,8.63e-25,52;UBERON:0005068,8.63e-25,52;UBERON:0006241,8.63e-25,52;UBERON:0007135,8.63e-25,52;UBERON:0001017,2.01e-24,73;UBERON:0002020,1.12e-23,34;UBERON:0001016,2.43e-23,75;UBERON:0010371,3.10e-23,73;UBERON:0004121,1.12e-22,95;UBERON:0000924,1.12e-22,95;UBERON:0006601,1.12e-22,95;UBERON:0000955,6.18e-20,47;UBERON:0006238,6.18e-20,47;UBERON:0002616,7.34e-19,46;UBERON:0003056,1.09e-18,49;UBERON:0003528,1.87e-18,29;UBERON:0002791,1.87e-18,29;UBERON:0001893,1.87e-18,29;UBERON:0003080,3.49e-16,40;UBERON:0002780,2.59e-15,39;UBERON:0001890,2.59e-15,39;UBERON:0006240,2.59e-15,39;UBERON:0010314,2.95e-15,92;UBERON:0000956,1.22e-12,21;UBERON:0001869,1.22e-12,21;UBERON:0000203,1.22e-12,21;UBERON:0002021,1.25e-12,10;UBERON:0000411,1.25e-12,10;UBERON:0001950,1.25e-12,10;UBERON:0002619,8.84e-12,17;UBERON:0003076,1.59e-09,12;UBERON:0003057,1.59e-09,12;UBERON:0002240,1.21e-07,6;UBERON:0005174,1.21e-07,6;UBERON:0001137,1.21e-07,6;UBERON:0002420,4.39e-07,8;UBERON:0007245,4.39e-07,8;UBERON:0010009,4.39e-07,8;UBERON:0010011,4.39e-07,8;UBERON:0000454,4.39e-07,8 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,2.02316460859598,2.64495489636016,1.90149421051854,0,0,0,0,0,0,0,1.45165457231869,0.810035629990144,1.05162480675691,4.57041575046086,4.8591079009355,1.5923803897944,1.0543001812006,0,3.30347642998166,4.21368215681119,3.22573719838111,2.1101806036831,3.56801810049398,1.56274011167028,1.67509799400829,6.19038871034848,2.90316670775939,12.9636577608414,8.54230084794618,5.03278503728312,0,0,0,0,0,0,0,0,0,0,0,0,8.87313544593087,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,0.913396434936424,0,0.150722640552623,0.705532242814229,0.125666591329675,0,0,0,0,0,0,0,33.6697916563279,27.0186251789357,0,0,0,0,4.6435098215495,1.83000241127451,3.01570445070875,5.73620256634512,4.85859368927628,4.1557608911912,4.38051410282946,2.24046600470696,0.373220911830279,0.252722758433675,0.841767423545896,0.130120442962704,0.459804208866946,1.44049703844279,2.41127708537144,2.65342346690179,2.69038812598185,3.93547243150861,3.62184719034622,0.215567992932842,0.567318240503458,2.11141348996739,0.876782929710299,2.22437799380478,0.696504333044333,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0.219550115291051,0.134206418760372,14.7202963994889,4.52780294468852,0,0,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,0.651859905768103,1.01847051465113,1.17345124144251,0.502518772325447,0,0,0.315270288212382,0,0,0,0,0,0,0,0,0,5.77982123956051,5.04010252346474,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,1.18586333383957,19.921921618152,0,0,0.488660878060728,0.329940245945071,0,0,0,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0.540183282093931,0.517434735131018,0.428674070063185,0,1.24858172321449,0.987294123612726,0.304464949114599,0,0,0,0.49465875882444,0,0.120625849856312,0.119372344003136,0.328281799490123,0.291480836629851,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.387479470433193,0.168956125490778,0.469428954583016,0.39061315453185,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2950368523413,11.0478056761722,12.6037012956667,8.93636548187176,10.9613203163303,9.06472676867641,8.10027000278167,9.45674526770863,6.34399372577886,6.21312374102184,0,0,1.19513524027894,1.70174701947806,0.419226325255965,1.2869045591501,1.77797382241292,2.67845574410562,2.56735367673452,2.52697211763797,1.77435509923168,2.64076877940507,1.96647165686753,1.85672941974121,2.12511235135769,1.90517476513229,0.927074607558844,0.77163688185482,3.29668720642645,2.20798380201596,1.71434626192708,1.77475806159337,1.43061713968393,1.45346416632329,2.4468438907986,1.94613598150856,1.28049581010941,1.31534855718921,1.62964936615034,2.80571135828869,1.77952527186261,1.37906275325789,0.818462086339379,1.54936841185966,2.12197272079256,2.24829520144151,1.63752125911786,0.859484216193193,0.765153328275374,0.441182838239031,0.463735671240843 | |||
|short_description=p4@Trpm3 | |||
}} |
Revision as of 17:12, 13 September 2013
Short description: | p4@Trpm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Trpm3_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -62bp_to_NM_177341, uc008gzo.1_5end |
EntrezGene: | Trpm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.45e-15 | 23 |
neuroblast (sensu Vertebrata) | 8.45e-15 | 23 |
neuron | 2.00e-10 | 33 |
neuronal stem cell | 2.00e-10 | 33 |
neuroblast | 2.00e-10 | 33 |
electrically signaling cell | 2.00e-10 | 33 |
electrically responsive cell | 7.93e-08 | 39 |
electrically active cell | 7.93e-08 | 39 |
ectodermal cell | 3.46e-07 | 44 |
neurectodermal cell | 3.46e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.