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FFCP PHASE1:Mm9::chr19:4125765..4125813,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=11632|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000136043_5end|description=CAGE_peak_5_at_Aip_5end|id=chr19:4125765..4125813,-|ontology_enrichment_celltype=CL:0002319!7.54e-08!43;CL:0000221!9.79e-08!44;CL:0000133!9.79e-08!44;CL:0000055!2.66e-07!50|ontology_enrichment_celltype_v019_2=CL:0002319,1.77e-07,43;CL:0000221,2.26e-07,44;CL:0000133,2.26e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!9.86e-19!73;UBERON:0005743!9.86e-19!73;UBERON:0000073!5.69e-18!75;UBERON:0001016!5.69e-18!75;UBERON:0001049!6.40e-15!52;UBERON:0005068!6.40e-15!52;UBERON:0006241!6.40e-15!52;UBERON:0007135!6.40e-15!52;UBERON:0004121!2.40e-14!102;UBERON:0000924!2.40e-14!102;UBERON:0006601!2.40e-14!102;UBERON:0002616!1.08e-13!49;UBERON:0002346!6.04e-13!71;UBERON:0003075!6.04e-13!71;UBERON:0007284!6.04e-13!71;UBERON:0000955!6.67e-13!50;UBERON:0006238!6.67e-13!50;UBERON:0000033!1.54e-10!63;UBERON:0002020!2.11e-09!34;UBERON:0003080!3.79e-09!40;UBERON:0002780!1.26e-08!39;UBERON:0001890!1.26e-08!39;UBERON:0006240!1.26e-08!39;UBERON:0003056!2.18e-07!49;UBERON:0002791!2.19e-07!29;UBERON:0003528!2.19e-07!29;UBERON:0001893!2.19e-07!29;UBERON:0003076!2.59e-07!12;UBERON:0003057!2.59e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.80e-18,73;UBERON:0001016,1.54e-17,75;UBERON:0000073,1.08e-15,54;UBERON:0001049,1.15e-14,52;UBERON:0005068,1.15e-14,52;UBERON:0006241,1.15e-14,52;UBERON:0007135,1.15e-14,52;UBERON:0004121,1.93e-13,95;UBERON:0000924,1.93e-13,95;UBERON:0006601,1.93e-13,95;UBERON:0010314,2.51e-13,92;UBERON:0002346,1.74e-12,64;UBERON:0003075,1.74e-12,64;UBERON:0007284,1.74e-12,64;UBERON:0002616,7.26e-12,46;UBERON:0010371,9.93e-12,73;UBERON:0000955,4.54e-11,47;UBERON:0006238,4.54e-11,47;UBERON:0002020,4.10e-09,34;UBERON:0003080,6.88e-09,40;UBERON:0002780,2.29e-08,39;UBERON:0001890,2.29e-08,39;UBERON:0006240,2.29e-08,39;UBERON:0003076,2.22e-07,12;UBERON:0003057,2.22e-07,12;UBERON:0003528,4.22e-07,29;UBERON:0002791,4.22e-07,29;UBERON:0001893,4.22e-07,29;UBERON:0003056,4.55e-07,49|phase1_expression=3.20297694209588,0.348975407639361,2.27499619694768,1.51232105653415,1.00179145989269,0.671517087647559,0.934450562382103,0,0.140788722151667,0,0,0,0,0,0.333109761815663,1.61980213911861,2.09868563438444,0,0.411343300817216,0.42438965179803,1.7008658030214,0.893618560807968,0.522399578277871,1.75991665072747,1.14704640533585,0.57423196411502,1.7230479846363,1.07735616342945,0,0.504060259519861,1.55211357458713,1.90509202037889,3.07532393792285,0,0.577703239502549,0.332469290716985,0.612508068787107,2.51118978442145,2.3440060335714,3.14114246384279,2.94115744015507,0,2.42755176515577,2.26614272356039,2.23029248682932,3.12029478674859,4.69434806608824,5.88667922227206,5.93152693383074,5.05517737593137,4.05960622713551,7.18762821824858,0,0,0.336093799142464,1.28629718017973,1.43266719969378,3.09403255366465,3.84401275633236,6.87688273053643,3.1691570175309,2.71075625655306,6.22506357277798,4.04954872776629,2.96659908770092,2.1314403448383,2.09720077362883,5.76327457982332,1.55534418462716,0.810035629990144,0.841299845405528,5.14171771926846,6.62605622854841,2.08234358665422,1.24599112323707,0.919218786610021,5.50579404996943,5.2351808614927,4.14737639791857,3.29715719325485,3.65950574409639,3.12548022334056,6.97957497503452,3.37657566019008,5.65353516774197,3.53554302568401,3.84403538157578,2.79599168737951,0.454357159999104,2.34271836331035,0.579728977403356,0.860423876981386,0.679971333707751,2.15881276655127,0,1.34408066129201,2.80888840263504,2.21559419351475,3.89679006904303,3.88673531961374,1.97180787687353,1.28326477414318,2.54805239706646,7.11066703153331,1.5154372870785,1.77351905832569,0,1.25602267690966,0,1.7813056687779,2.08182392119363,2.43572382649713,2.30615497256059,2.86373017049983,2.11659672844269,2.13633205260448,0.741584903203122,1.44599356919912,2.65383165584962,1.13236794963186,2.42925670306433,1.45462575940567,3.72783522436244,3.80615036115011,3.35114730901528,3.0654846625031,0.239630249011841,0.599902730993408,0.508280908292259,6.44099749440738,6.40500843946077,4.52355667606312,3.82413504423008,5.37002460393694,3.32460871295296,4.05603157669394,1.93494791315601,1.24406970610093,2.0217820674694,1.89397670297827,2.21204753036596,2.29902104433473,2.16074555766419,1.50704817835715,1.2246569847239,0.896796041993948,1.68663104207512,1.81092359517311,1.29340795759705,0.945530400839096,2.11141348996739,2.6303487891309,2.78047249225598,2.78601733217733,2.26360350048738,1.19420560091096,1.40442637462647,0.772043721344145,0.852490498186778,1.86413195281952,3.28336483973535,1.08037236876609,1.89395788468168,3.34499193970586,2.31400669331067,2.79040733700489,1.07309360559848,2.21854150497622,1.15191894939436,2.29834449710733,2.83740833410495,2.63159977365598,3.73235195994786,5.77087600669599,3.36463917702604,2.77842453424068,1.65209391491899,1.32225283331772,1.49301775374664,2.09013004674395,1.28867461322093,1.00841762311671,1.779024350758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|EntrezGene=11632
|HGNC=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000136043_5end
|description=CAGE_peak_5_at_Aip_5end
|id=chr19:4125765..4125813,-
|ontology_enrichment_celltype=CL:0002319!7.54e-08!43;CL:0000221!9.79e-08!44;CL:0000133!9.79e-08!44;CL:0000055!2.66e-07!50
|ontology_enrichment_celltype_v019_2=CL:0002319,1.77e-07,43;CL:0000221,2.26e-07,44;CL:0000133,2.26e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!9.86e-19!73;UBERON:0005743!9.86e-19!73;UBERON:0000073!5.69e-18!75;UBERON:0001016!5.69e-18!75;UBERON:0001049!6.40e-15!52;UBERON:0005068!6.40e-15!52;UBERON:0006241!6.40e-15!52;UBERON:0007135!6.40e-15!52;UBERON:0004121!2.40e-14!102;UBERON:0000924!2.40e-14!102;UBERON:0006601!2.40e-14!102;UBERON:0002616!1.08e-13!49;UBERON:0002346!6.04e-13!71;UBERON:0003075!6.04e-13!71;UBERON:0007284!6.04e-13!71;UBERON:0000955!6.67e-13!50;UBERON:0006238!6.67e-13!50;UBERON:0000033!1.54e-10!63;UBERON:0002020!2.11e-09!34;UBERON:0003080!3.79e-09!40;UBERON:0002780!1.26e-08!39;UBERON:0001890!1.26e-08!39;UBERON:0006240!1.26e-08!39;UBERON:0003056!2.18e-07!49;UBERON:0002791!2.19e-07!29;UBERON:0003528!2.19e-07!29;UBERON:0001893!2.19e-07!29;UBERON:0003076!2.59e-07!12;UBERON:0003057!2.59e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.80e-18,73;UBERON:0001016,1.54e-17,75;UBERON:0000073,1.08e-15,54;UBERON:0001049,1.15e-14,52;UBERON:0005068,1.15e-14,52;UBERON:0006241,1.15e-14,52;UBERON:0007135,1.15e-14,52;UBERON:0004121,1.93e-13,95;UBERON:0000924,1.93e-13,95;UBERON:0006601,1.93e-13,95;UBERON:0010314,2.51e-13,92;UBERON:0002346,1.74e-12,64;UBERON:0003075,1.74e-12,64;UBERON:0007284,1.74e-12,64;UBERON:0002616,7.26e-12,46;UBERON:0010371,9.93e-12,73;UBERON:0000955,4.54e-11,47;UBERON:0006238,4.54e-11,47;UBERON:0002020,4.10e-09,34;UBERON:0003080,6.88e-09,40;UBERON:0002780,2.29e-08,39;UBERON:0001890,2.29e-08,39;UBERON:0006240,2.29e-08,39;UBERON:0003076,2.22e-07,12;UBERON:0003057,2.22e-07,12;UBERON:0003528,4.22e-07,29;UBERON:0002791,4.22e-07,29;UBERON:0001893,4.22e-07,29;UBERON:0003056,4.55e-07,49
|phase1_expression=3.20297694209588,0.348975407639361,2.27499619694768,1.51232105653415,1.00179145989269,0.671517087647559,0.934450562382103,0,0.140788722151667,0,0,0,0,0,0.333109761815663,1.61980213911861,2.09868563438444,0,0.411343300817216,0.42438965179803,1.7008658030214,0.893618560807968,0.522399578277871,1.75991665072747,1.14704640533585,0.57423196411502,1.7230479846363,1.07735616342945,0,0.504060259519861,1.55211357458713,1.90509202037889,3.07532393792285,0,0.577703239502549,0.332469290716985,0.612508068787107,2.51118978442145,2.3440060335714,3.14114246384279,2.94115744015507,0,2.42755176515577,2.26614272356039,2.23029248682932,3.12029478674859,4.69434806608824,5.88667922227206,5.93152693383074,5.05517737593137,4.05960622713551,7.18762821824858,0,0,0.336093799142464,1.28629718017973,1.43266719969378,3.09403255366465,3.84401275633236,6.87688273053643,3.1691570175309,2.71075625655306,6.22506357277798,4.04954872776629,2.96659908770092,2.1314403448383,2.09720077362883,5.76327457982332,1.55534418462716,0.810035629990144,0.841299845405528,5.14171771926846,6.62605622854841,2.08234358665422,1.24599112323707,0.919218786610021,5.50579404996943,5.2351808614927,4.14737639791857,3.29715719325485,3.65950574409639,3.12548022334056,6.97957497503452,3.37657566019008,5.65353516774197,3.53554302568401,3.84403538157578,2.79599168737951,0.454357159999104,2.34271836331035,0.579728977403356,0.860423876981386,0.679971333707751,2.15881276655127,0,1.34408066129201,2.80888840263504,2.21559419351475,3.89679006904303,3.88673531961374,1.97180787687353,1.28326477414318,2.54805239706646,7.11066703153331,1.5154372870785,1.77351905832569,0,1.25602267690966,0,1.7813056687779,2.08182392119363,2.43572382649713,2.30615497256059,2.86373017049983,2.11659672844269,2.13633205260448,0.741584903203122,1.44599356919912,2.65383165584962,1.13236794963186,2.42925670306433,1.45462575940567,3.72783522436244,3.80615036115011,3.35114730901528,3.0654846625031,0.239630249011841,0.599902730993408,0.508280908292259,6.44099749440738,6.40500843946077,4.52355667606312,3.82413504423008,5.37002460393694,3.32460871295296,4.05603157669394,1.93494791315601,1.24406970610093,2.0217820674694,1.89397670297827,2.21204753036596,2.29902104433473,2.16074555766419,1.50704817835715,1.2246569847239,0.896796041993948,1.68663104207512,1.81092359517311,1.29340795759705,0.945530400839096,2.11141348996739,2.6303487891309,2.78047249225598,2.78601733217733,2.26360350048738,1.19420560091096,1.40442637462647,0.772043721344145,0.852490498186778,1.86413195281952,3.28336483973535,1.08037236876609,1.89395788468168,3.34499193970586,2.31400669331067,2.79040733700489,1.07309360559848,2.21854150497622,1.15191894939436,2.29834449710733,2.83740833410495,2.63159977365598,3.73235195994786,5.77087600669599,3.36463917702604,2.77842453424068,1.65209391491899,1.32225283331772,1.49301775374664,2.09013004674395,1.28867461322093,1.00841762311671,1.77902435075896,1.14135375667535,1.89811624617805,1.64698954724011,1.25667604400135,1.1937388322469,1.9496408711912,0.898819408654221,1.51296634912286,1.39398891278057,1.32767530667157,2.39921876480431,1.1270773567308,1.4255592949172,2.13347735884388,2.10407459670956,1.3279672796094,1.62371162777562,2.511979645462,2.34454611451421,0.889357881261447,0.667380422864376,1.96558995113203,1.34917267430912,2.23146133527353,0.72353147925725,1.52775511068852,0.863088412352432,0.972811360650212,0.549122826376163,2.87536413054709,2.23284568601102,0.936113019343682,2.27320990152401,1.97337154874103,0.482443521363367,2.03228509183265,1.70542270593436,1.14075483509418,1.69745085775188,1.40814148973101,2.51259386162724,2.61848004974615,0.390267295715598,1.10344600874334,1.32878813789265,1.2756381492599,1.3109065177259,2.41758974612254,1.01254341007058,0,0,2.95058563811422,1.37968373152366,7.70642831941401,9.14251155419185,0.655739781506702,8.33154059774431,1.89304931649754,3.12350995437311,2.36965737506079,0.955875191810208,3.7875774594007,1.41538265394416,1.61924280669958,2.92255857911312,2.37172666767914,0.642642632843614,1.70328102249922,2.49291845134157,1.62886959353576,1.31976098378028,1.32745138339963,2.42780636154981,2.11626489875326,2.07465587731488,2.06711325016541,2.15204603560749,2.84271122485043,1.45413491791002,1.78248689192361,0.948110273807448,0,0,2.04263763452273,1.8006109403131,2.19909762430683,2.57204442037911,1.95074257006501,3.56737635204141,2.30368628842969,5.78483403317739,0.704015124191131,1.48282449604674,1.7642271844397,2.30840754118072,2.09903754704677,1.26657142349127,2.02932984805332,1.14898629821543,1.1659233465194,6.48988557036784,0.683483523191411,1.23832120777933,1.48155621895769,0.753473828018764,1.36694227721025,0.457556346413045,0.169978429993855,0.279902904647316,0.414599921413271,2.86401185404534,2.53068794864908,1.82987520414164,0.86404272657441,1.46361807210128,1.09181281873089,0.539457385539283,1.23980183588004,2.6175594198403,2.46268449254406,1.24267862617385,2.25477175473676,2.0932316446157,3.64008679005615,4.083474955225,3.87479470433193,3.04121025883401,2.46450201156083,2.47388331203505,3.8797957437513,3.14059357073808,4.03242008761012,0.632022241256357,1.62180172232131,1.02710957164827,0.909445760844565,0.358053391334963,0.79472541912506,0.240390899039938,0.443068581523732,0.403865799792591,0.0762068066549998,0.403304740547362,0.194915761479505,0.192423683280659,0.350630706544707,2.0405734525369,0.665957860122194,0.358855426437903,0.335769232728157,1.73870634628971,1.87682475451182,0.549454872801795,0.857473516316263,3.00943262421218,3.95326289831947,3.22227665555024,1.71868654031819,2.92150409984269,6.16574267793578,4.5323633843382,7.42524750254986,8.55610286126019,7.70342095273148,7.24864436452548,1.66059756134683,1.59609949360412,1.87806966329548,1.94485373654635,3.35381060204772,3.30918315210025,2.00022055021454,3.5025959730612,2.88827288632634,2.77966932940177,3.54871019846336,2.45214243801899,1.77918864192777,2.11283002936069,2.06767688240208,2.38146845641537,3.24476112645595,1.92909220463705,2.88460130562315,2.64958056241915,3.08582327146874,2.66213709239006,1.1921809497366,3.0522747492789,2.72917203204459,2.876896668317,2.56099162021882,3.41990624869196,2.30866993537965,3.36685362994643,2.25406534435931,2.46261205938909,2.04615521584845,2.01417893541756,2.3148793317737,3.49734809113124,1.40358965067245,2.14871054048298,4.59091996965224,3.52946270591225,1.39120701372253
|short_description=p5@Aip
}}

Revision as of 17:36, 13 September 2013

Short description:p5@Aip
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Aip_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000136043_5end
EntrezGene:Aip
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Aip

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.06
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.65
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F92.34
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C12.12
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A46.44
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F14.52
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E22.11
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G12.84
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D25.77
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G12.78
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F82.40
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G72.10
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C27.71
medulla oblongata, neonate N30.CNhs11200.1396-42A39.14
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B91.95
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.76
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H31.27
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I12.46
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G54.08
testis, embryo E17.CNhs11029.486-18I53.87
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D93.88
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C64.59
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.77e-0743
ectodermal cell2.26e-0744
neurectodermal cell2.26e-0744

Uber anatomy
Ontology termp-valuen
central nervous system2.80e-1873
nervous system1.54e-1775
regional part of nervous system1.08e-1554
neural tube1.15e-1452
neural rod1.15e-1452
future spinal cord1.15e-1452
neural keel1.15e-1452
ectoderm-derived structure1.93e-1395
ectoderm1.93e-1395
presumptive ectoderm1.93e-1395
structure with developmental contribution from neural crest2.51e-1392
neurectoderm1.74e-1264
neural plate1.74e-1264
presumptive neural plate1.74e-1264
regional part of brain7.26e-1246
ecto-epithelium9.93e-1273
brain4.54e-1147
future brain4.54e-1147
gray matter4.10e-0934
anterior neural tube6.88e-0940
regional part of forebrain2.29e-0839
forebrain2.29e-0839
future forebrain2.29e-0839
posterior neural tube2.22e-0712
chordal neural plate2.22e-0712
brain grey matter4.22e-0729
regional part of telencephalon4.22e-0729
telencephalon4.22e-0729
pre-chordal neural plate4.55e-0749







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