FFCP PHASE1:Hg19::chr6:138413151..138413166,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1043|description=CAGE_peak_at_chr6:138413151..138413166,-|id=chr6:138413151..138413166,-|ontology_enrichment_celltype=CL:0000066!2.66e-24!254;CL:0002076!1.63e-14!43;CL:0000223!1.16e-12!59;CL:0002251!4.89e-10!21;CL:0002321!2.69e-09!248;CL:0000220!3.62e-09!246|ontology_enrichment_celltype_v019=CL:0002159;7.91e-14;14!CL:0000349;6.97e-12;19!CL:0000244;1.94e-10;4!CL:0000731;1.94e-10;4!CL:0002251;6.15e-09;20!CL:0002076;1.13e-08;42!CL:0002077;2.12e-08;34!CL:0002166;3.73e-08;3|ontology_enrichment_celltype_v019_2=CL:0002159,7.86e-14,14;CL:0000066,1.11e-11,253;CL:0000349,1.67e-11,19;CL:0000244,9.66e-11,4;CL:0000731,9.66e-11,4;CL:0002076,1.52e-10,42;CL:0002077,6.86e-10,34;CL:0002251,6.89e-09,20;CL:0000223,9.39e-09,58;CL:0002166,1.88e-08,3|ontology_enrichment_development_v019=UBERON:0005795;2.76e-08;10|ontology_enrichment_disease=DOID:305!2.50e-10!106;DOID:0050687!1.77e-08!143|ontology_enrichment_disease_v019=DOID:0060084;8.44e-08;3!DOID:127;8.44e-08;3|ontology_enrichment_disease_v019_2=DOID:0060084,2.61e-08,3;DOID:127,2.61e-08,3|ontology_enrichment_uberon=UBERON:0004119!5.10e-15!169;UBERON:0000925!5.10e-15!169;UBERON:0006595!5.10e-15!169;UBERON:0001007!1.10e-11!155;UBERON:0001555!1.10e-11!155;UBERON:0007026!1.10e-11!155;UBERON:0001004!9.21e-10!72;UBERON:0000161!2.21e-09!35;UBERON:0004921!5.81e-09!129;UBERON:0004185!5.81e-09!129;UBERON:0003102!7.20e-08!95;UBERON:0003100!8.46e-08!41;UBERON:0000915!1.24e-07!52;UBERON:0005156!1.27e-07!59;UBERON:0000990!1.27e-07!59;UBERON:0000077!2.09e-07!130;UBERON:0000464!5.87e-07!104|ontology_enrichment_uberon_v019=UBERON:0005631;2.98e-12;10!UBERON:0000158;2.98e-12;10!UBERON:0000478;5.72e-11;24!UBERON:0000305;3.15e-09;7!UBERON:0000365;2.38e-08;5!UBERON:0000165;2.22e-07;28!UBERON:0000486;4.62e-07;12!UBERON:0005910;5.95e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.95e-13,14;UBERON:0000158,1.95e-13,14;UBERON:0000478,1.20e-10,24;UBERON:0000305,7.24e-09,7;UBERON:0000365,1.38e-08,5;UBERON:0003102,3.44e-08,99;UBERON:0000166,3.81e-08,22;UBERON:0000161,4.27e-08,36;UBERON:0005795,8.89e-08,22;UBERON:0004871,1.04e-07,8;UBERON:0005910,3.80e-07,6;UBERON:0000165,4.08e-07,29;UBERON:0000930,4.08e-07,29;UBERON:0000033,6.82e-07,56;UBERON:0000153,6.84e-07,62;UBERON:0007811,6.84e-07,62|phase1_expression=0.54503513781167,1.2846031433459,0.140954404095971,1.0007329835313,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0.245733936501509,0,1.09220686065086,1.05506791291381,0.123766352960047,0.662794751455832,1.34465029290355,0,1.46062018077475,0.487932798790507,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0,0,0.157421562627358,0,0,0,0,0.90361775633475,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0.50133791063589,1.15877215168659,0,0,0.0945348171640679,0,0.527008714158756,0,1.09288586487763,5.19098219898201,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.17859945656816,0,0,0,0,0.183201743930407,0,0,2.18047026071267,0,0.25326102332916,0,0,0.709336764396714,1.12135520028461,0,0.74000264525148,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0.448346041655403,0.117434498643765,0,0.140450806702248,0,0.368502951935304,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0.276149695926898,0.646584227275248,0,0.10075209822764,0.339121184620975,2.89891279744945,1.36373060295417,0.860413786167011,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0.643240938192885,0,0.928735856063958,2.16563844500876,0.473227200159376,0.505754070234305,0.241011029883482,0.992645754591546,0.435758888184812,0.71181185733329,0.808987848960987,0.196221465125346,0.769494313892781,0,0,0,0,1.26755034821831,0,0,0,0.860919069801795,0,2.63400684980701,0,2.21163739305588,1.66659201285353,0.325808305310325,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0,0.790204397959275,2.57545848628462,0,0,0,1.87467667973554,2.35174979478403,1.55952606966625,1.43293636324557,2.61570544662566,1.91691339582606,0,0,0,0,0,0,0,0,1.71072446022705,0.411309970813294,0,0,0,0.87192013766656,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.602878754119172,0,1.19967589418468,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.61642896765115,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.831883446123229,3.03329280955175,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62927481,0,0.0620747142958579,0.224263725161227,0.12729431655633,0,6.31378568901188,4.10679961302337,0.336760265072938,0.286888821570705,0.99798106963804,0.244209805832924,0.106727345877715,0,1.3473780315988,2.34640942403454,0.122241444182866,1.22068853494722,0,0,0|short_description=p@chr6:138413151..138413166,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1043 | |||
|description=CAGE_peak_at_chr6:138413151..138413166,- | |||
|id=chr6:138413151..138413166,- | |||
|ontology_enrichment_celltype=CL:0000066!2.66e-24!254;CL:0002076!1.63e-14!43;CL:0000223!1.16e-12!59;CL:0002251!4.89e-10!21;CL:0002321!2.69e-09!248;CL:0000220!3.62e-09!246 | |||
|ontology_enrichment_celltype_v019=CL:0002159;7.91e-14;14!CL:0000349;6.97e-12;19!CL:0000244;1.94e-10;4!CL:0000731;1.94e-10;4!CL:0002251;6.15e-09;20!CL:0002076;1.13e-08;42!CL:0002077;2.12e-08;34!CL:0002166;3.73e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,7.86e-14,14;CL:0000066,1.11e-11,253;CL:0000349,1.67e-11,19;CL:0000244,9.66e-11,4;CL:0000731,9.66e-11,4;CL:0002076,1.52e-10,42;CL:0002077,6.86e-10,34;CL:0002251,6.89e-09,20;CL:0000223,9.39e-09,58;CL:0002166,1.88e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.76e-08;10 | |||
|ontology_enrichment_disease=DOID:305!2.50e-10!106;DOID:0050687!1.77e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.44e-08;3!DOID:127;8.44e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.61e-08,3;DOID:127,2.61e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.10e-15!169;UBERON:0000925!5.10e-15!169;UBERON:0006595!5.10e-15!169;UBERON:0001007!1.10e-11!155;UBERON:0001555!1.10e-11!155;UBERON:0007026!1.10e-11!155;UBERON:0001004!9.21e-10!72;UBERON:0000161!2.21e-09!35;UBERON:0004921!5.81e-09!129;UBERON:0004185!5.81e-09!129;UBERON:0003102!7.20e-08!95;UBERON:0003100!8.46e-08!41;UBERON:0000915!1.24e-07!52;UBERON:0005156!1.27e-07!59;UBERON:0000990!1.27e-07!59;UBERON:0000077!2.09e-07!130;UBERON:0000464!5.87e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.98e-12;10!UBERON:0000158;2.98e-12;10!UBERON:0000478;5.72e-11;24!UBERON:0000305;3.15e-09;7!UBERON:0000365;2.38e-08;5!UBERON:0000165;2.22e-07;28!UBERON:0000486;4.62e-07;12!UBERON:0005910;5.95e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.95e-13,14;UBERON:0000158,1.95e-13,14;UBERON:0000478,1.20e-10,24;UBERON:0000305,7.24e-09,7;UBERON:0000365,1.38e-08,5;UBERON:0003102,3.44e-08,99;UBERON:0000166,3.81e-08,22;UBERON:0000161,4.27e-08,36;UBERON:0005795,8.89e-08,22;UBERON:0004871,1.04e-07,8;UBERON:0005910,3.80e-07,6;UBERON:0000165,4.08e-07,29;UBERON:0000930,4.08e-07,29;UBERON:0000033,6.82e-07,56;UBERON:0000153,6.84e-07,62;UBERON:0007811,6.84e-07,62 | |||
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| |||
|short_description=p@chr6:138413151..138413166,- | |||
}} |
Revision as of 18:19, 13 September 2013
Short description: | p@chr6:138413151..138413166, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:138413151..138413166, - |
Coexpression cluster: | C1043_keratoacanthoma_Prostate_tongue_amniotic_salivary_skin_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 7.86e-14 | 14 |
epithelial cell | 1.11e-11 | 253 |
extraembryonic cell | 1.67e-11 | 19 |
transitional epithelial cell | 9.66e-11 | 4 |
urothelial cell | 9.66e-11 | 4 |
endo-epithelial cell | 1.52e-10 | 42 |
ecto-epithelial cell | 6.86e-10 | 34 |
epithelial cell of alimentary canal | 6.89e-09 | 20 |
endodermal cell | 9.39e-09 | 58 |
epithelial cell of Malassez | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.95e-13 | 14 |
membranous layer | 1.95e-13 | 14 |
extraembryonic structure | 1.20e-10 | 24 |
amnion | 7.24e-09 | 7 |
urothelium | 1.38e-08 | 5 |
surface structure | 3.44e-08 | 99 |
oral opening | 3.81e-08 | 22 |
orifice | 4.27e-08 | 36 |
embryonic uterus | 8.89e-08 | 22 |
somatic layer of lateral plate mesoderm | 1.04e-07 | 8 |
transitional epithelium | 3.80e-07 | 6 |
mouth | 4.08e-07 | 29 |
stomodeum | 4.08e-07 | 29 |
head | 6.82e-07 | 56 |
anterior region of body | 6.84e-07 | 62 |
craniocervical region | 6.84e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.61e-08 | 3 |
leiomyoma | 2.61e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.