FFCP PHASE1:Mm9::chr19:6497758..6497764,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=18190|HGNC=|MCL_coexpression_id=42|UniProt=E9PUN2|association_with_transcript=-63bp_to_ENSMUST00000113458_5end|description=CAGE_peak_17_at_Nrxn2_5end|id=chr19:6497758..6497764,+|ontology_enrichment_celltype=CL:0000117!3.22e-13!23;CL:0000337!3.22e-13!23;CL:0000540!2.24e-09!33;CL:0000047!2.24e-09!33;CL:0000031!2.24e-09!33;CL:0000404!2.24e-09!33;CL:0002319!1.13e-08!43;CL:0000221!2.22e-08!44;CL:0000133!2.22e-08!44;CL:0000393!2.26e-07!39;CL:0000211!2.26e-07!39;CL:0002613!5.65e-07!3;CL:0000055!7.05e-07!50|ontology_enrichment_celltype_v019_2=CL:0000878,9.50e-23,2;CL:0000129,9.50e-23,2;CL:0002194,4.02e-12,4;CL:0000766,4.02e-12,4;CL:0000234,4.02e-12,4;CL:0000576,4.02e-12,4;CL:0000235,4.02e-12,4;CL:0000864,4.02e-12,4;CL:0002009,4.02e-12,4;CL:0000040,4.02e-12,4;CL:0000559,4.02e-12,4;CL:0000473,1.64e-07,7;CL:0000557,1.64e-07,7;CL:0002453,9.78e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.53e-19!73;UBERON:0005743!3.53e-19!73;UBERON:0000073!1.94e-18!75;UBERON:0001016!1.94e-18!75;UBERON:0004121!9.22e-18!102;UBERON:0000924!9.22e-18!102;UBERON:0006601!9.22e-18!102;UBERON:0001049!7.33e-17!52;UBERON:0005068!7.33e-17!52;UBERON:0006241!7.33e-17!52;UBERON:0007135!7.33e-17!52;UBERON:0002346!1.87e-16!71;UBERON:0003075!1.87e-16!71;UBERON:0007284!1.87e-16!71;UBERON:0000033!3.89e-16!63;UBERON:0000955!2.37e-14!50;UBERON:0006238!2.37e-14!50;UBERON:0002020!4.89e-14!34;UBERON:0002616!3.87e-13!49;UBERON:0003056!2.97e-11!49;UBERON:0007811!7.95e-11!86;UBERON:0002780!9.58e-10!39;UBERON:0001890!9.58e-10!39;UBERON:0006240!9.58e-10!39;UBERON:0002791!1.09e-09!29;UBERON:0003528!1.09e-09!29;UBERON:0001893!1.09e-09!29;UBERON:0003076!1.45e-09!12;UBERON:0003057!1.45e-09!12;UBERON:0003080!2.15e-09!40;UBERON:0000153!2.77e-09!94;UBERON:0002240!3.26e-08!6;UBERON:0005174!3.26e-08!6;UBERON:0001137!3.26e-08!6;UBERON:0000369!7.33e-07!5;UBERON:0002435!7.33e-07!5;UBERON:0000204!7.33e-07!5;UBERON:0010082!7.33e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.12e-12,4;UBERON:0002680,3.12e-12,4;UBERON:0001895,3.12e-12,4;UBERON:0010092,3.12e-12,4;UBERON:0006215,3.12e-12,4;UBERON:0004733,1.29e-08,6;UBERON:0004732,1.29e-08,6;UBERON:0002028,1.29e-08,6;UBERON:0007277,1.29e-08,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,1.92109152660777,0.207379224616955,0.270011876663381,0,0.571301968807607,0.441737081903227,0,0.383381884072945,0,0,0.383062014255563,0.153606533256243,0.527545150920775,0.457438218012048,0.52091337055676,0,0,0.15279824777681,0,0.996601765593721,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.585561594023094,7.54008144528438,0,0,0,0,0,0,0.376963056338593,0.347648640384553,0,0.20778804455956,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0.272145996605311,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0.370850604021019,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p17@Nrxn2}} | ||
|EntrezGene=18190 | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|UniProt=E9PUN2 | |||
|association_with_transcript=-63bp_to_ENSMUST00000113458_5end | |||
|description=CAGE_peak_17_at_Nrxn2_5end | |||
|id=chr19:6497758..6497764,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.22e-13!23;CL:0000337!3.22e-13!23;CL:0000540!2.24e-09!33;CL:0000047!2.24e-09!33;CL:0000031!2.24e-09!33;CL:0000404!2.24e-09!33;CL:0002319!1.13e-08!43;CL:0000221!2.22e-08!44;CL:0000133!2.22e-08!44;CL:0000393!2.26e-07!39;CL:0000211!2.26e-07!39;CL:0002613!5.65e-07!3;CL:0000055!7.05e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,9.50e-23,2;CL:0000129,9.50e-23,2;CL:0002194,4.02e-12,4;CL:0000766,4.02e-12,4;CL:0000234,4.02e-12,4;CL:0000576,4.02e-12,4;CL:0000235,4.02e-12,4;CL:0000864,4.02e-12,4;CL:0002009,4.02e-12,4;CL:0000040,4.02e-12,4;CL:0000559,4.02e-12,4;CL:0000473,1.64e-07,7;CL:0000557,1.64e-07,7;CL:0002453,9.78e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.53e-19!73;UBERON:0005743!3.53e-19!73;UBERON:0000073!1.94e-18!75;UBERON:0001016!1.94e-18!75;UBERON:0004121!9.22e-18!102;UBERON:0000924!9.22e-18!102;UBERON:0006601!9.22e-18!102;UBERON:0001049!7.33e-17!52;UBERON:0005068!7.33e-17!52;UBERON:0006241!7.33e-17!52;UBERON:0007135!7.33e-17!52;UBERON:0002346!1.87e-16!71;UBERON:0003075!1.87e-16!71;UBERON:0007284!1.87e-16!71;UBERON:0000033!3.89e-16!63;UBERON:0000955!2.37e-14!50;UBERON:0006238!2.37e-14!50;UBERON:0002020!4.89e-14!34;UBERON:0002616!3.87e-13!49;UBERON:0003056!2.97e-11!49;UBERON:0007811!7.95e-11!86;UBERON:0002780!9.58e-10!39;UBERON:0001890!9.58e-10!39;UBERON:0006240!9.58e-10!39;UBERON:0002791!1.09e-09!29;UBERON:0003528!1.09e-09!29;UBERON:0001893!1.09e-09!29;UBERON:0003076!1.45e-09!12;UBERON:0003057!1.45e-09!12;UBERON:0003080!2.15e-09!40;UBERON:0000153!2.77e-09!94;UBERON:0002240!3.26e-08!6;UBERON:0005174!3.26e-08!6;UBERON:0001137!3.26e-08!6;UBERON:0000369!7.33e-07!5;UBERON:0002435!7.33e-07!5;UBERON:0000204!7.33e-07!5;UBERON:0010082!7.33e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.12e-12,4;UBERON:0002680,3.12e-12,4;UBERON:0001895,3.12e-12,4;UBERON:0010092,3.12e-12,4;UBERON:0006215,3.12e-12,4;UBERON:0004733,1.29e-08,6;UBERON:0004732,1.29e-08,6;UBERON:0002028,1.29e-08,6;UBERON:0007277,1.29e-08,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,1.92109152660777,0.207379224616955,0.270011876663381,0,0.571301968807607,0.441737081903227,0,0.383381884072945,0,0,0.383062014255563,0.153606533256243,0.527545150920775,0.457438218012048,0.52091337055676,0,0,0.15279824777681,0,0.996601765593721,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.585561594023094,7.54008144528438,0,0,0,0,0,0,0.376963056338593,0.347648640384553,0,0.20778804455956,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0.272145996605311,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0.370850604021019,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p17@Nrxn2 | |||
}} |
Revision as of 18:22, 13 September 2013
Short description: | p17@Nrxn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_Nrxn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | -63bp_to_ENSMUST00000113458_5end |
EntrezGene: | Nrxn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 9.50e-23 | 2 |
microglial cell | 9.50e-23 | 2 |
monopoietic cell | 4.02e-12 | 4 |
myeloid leukocyte | 4.02e-12 | 4 |
phagocyte | 4.02e-12 | 4 |
monocyte | 4.02e-12 | 4 |
macrophage | 4.02e-12 | 4 |
tissue-resident macrophage | 4.02e-12 | 4 |
macrophage dendritic cell progenitor | 4.02e-12 | 4 |
monoblast | 4.02e-12 | 4 |
promonocyte | 4.02e-12 | 4 |
defensive cell | 1.64e-07 | 7 |
granulocyte monocyte progenitor cell | 1.64e-07 | 7 |
oligodendrocyte precursor cell | 9.78e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.12e-12 | 4 |
regional part of metencephalon | 3.12e-12 | 4 |
metencephalon | 3.12e-12 | 4 |
future metencephalon | 3.12e-12 | 4 |
rhombic lip | 3.12e-12 | 4 |
segmental subdivision of hindbrain | 1.29e-08 | 6 |
segmental subdivision of nervous system | 1.29e-08 | 6 |
hindbrain | 1.29e-08 | 6 |
presumptive hindbrain | 1.29e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.