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FFCP PHASE1:Mm9::chr1:182499095..182499141,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=11545|HGNC=|UniProt=Q921K2|association_with_transcript=0bp_to_NM_007415,uc007dwi.1_5end|description=CAGE_peak_2_at_Parp1_5end|id=chr1:182499095..182499141,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!9.76e-11!94;UBERON:0003056!1.16e-10!49;UBERON:0000956!7.75e-10!21;UBERON:0001869!7.75e-10!21;UBERON:0000203!7.75e-10!21;UBERON:0002791!1.43e-09!29;UBERON:0003528!1.43e-09!29;UBERON:0001893!1.43e-09!29;UBERON:0002780!1.56e-09!39;UBERON:0001890!1.56e-09!39;UBERON:0006240!1.56e-09!39;UBERON:0003080!3.79e-09!40;UBERON:0002020!9.15e-09!34;UBERON:0007811!9.22e-09!86;UBERON:0000033!4.44e-08!63;UBERON:0002619!6.71e-08!17;UBERON:0001017!7.52e-08!73;UBERON:0005743!7.52e-08!73;UBERON:0002346!2.11e-07!71;UBERON:0003075!2.11e-07!71;UBERON:0007284!2.11e-07!71;UBERON:0002323!2.19e-07!37;UBERON:0004458!2.19e-07!37;UBERON:0000955!5.89e-07!50;UBERON:0006238!5.89e-07!50;UBERON:0000073!6.75e-07!75;UBERON:0001016!6.75e-07!75;UBERON:0001049!6.94e-07!52;UBERON:0005068!6.94e-07!52;UBERON:0006241!6.94e-07!52;UBERON:0007135!6.94e-07!52;UBERON:0002616!8.35e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.16e-10,49;UBERON:0000956,7.75e-10,21;UBERON:0001869,7.75e-10,21;UBERON:0000203,7.75e-10,21;UBERON:0003528,1.43e-09,29;UBERON:0002791,1.43e-09,29;UBERON:0001893,1.43e-09,29;UBERON:0002780,1.56e-09,39;UBERON:0001890,1.56e-09,39;UBERON:0006240,1.56e-09,39;UBERON:0003080,3.79e-09,40;UBERON:0002346,5.86e-09,64;UBERON:0003075,5.86e-09,64;UBERON:0007284,5.86e-09,64;UBERON:0002020,9.15e-09,34;UBERON:0002619,6.71e-08,17;UBERON:0001017,7.52e-08,73;UBERON:0000955,1.11e-07,47;UBERON:0006238,1.11e-07,47;UBERON:0002616,1.57e-07,46;UBERON:0002323,2.19e-07,37;UBERON:0004458,2.19e-07,37;UBERON:0010371,6.24e-07,73;UBERON:0001016,6.75e-07,75;UBERON:0001049,6.94e-07,52;UBERON:0005068,6.94e-07,52;UBERON:0006241,6.94e-07,52;UBERON:0007135,6.94e-07,52|phase1_expression=20.979498970728,1.04692622291808,0,0.60492842261366,0.500895729946347,4.53274034162102,6.77476657727024,14.0744422551318,12.8117737158017,15.2141942109296,14.8959632356189,15.3162545271046,10.785645985666,9.35398305883272,21.9852442798337,15.5905955890166,16.7894850750755,47.9502491344521,44.1508476210479,31.8292238848523,12.5864069423583,19.9574811913779,22.9855814442263,5.11975752938901,9.86459908588831,0,2.15380998079537,3.01659725760245,3.80046838912748,3.2763916868791,6.20845429834853,15.8757668364908,14.1464901144451,15.8481681015439,8.95440021228951,7.64679368649065,8.77928231928187,0.837063261473815,2.3440060335714,3.66466620781659,1.17646297606203,0,0.971020706062307,5.5394599909254,4.1564541800001,6.79122982998222,5.47673941043627,11.5553332881637,9.44650585758229,14.5822424305713,10.9189408867783,15.8127820801469,51.1736948476096,7.97898356212479,13.779845764841,2.57259436035947,5.73066879877513,3.09403255366465,26.3011399117477,23.2756030879694,19.0149421051854,4.74382344896785,5.33576877666684,6.29929802096979,6.92206453796882,6.3943210345149,4.79360176829448,9.22123932771731,36.8098123695096,37.8016627328734,36.5965432751405,13.139945282575,15.4607978666129,35.3998409731217,46.5808989148629,34.9303138911808,7.70811166995721,14.300981865541,14.1318010595744,24.6627358055462,25.7995154958795,18.2319679694866,10.8881369610539,7.87867654044352,13.4462458043593,12.0797720044204,16.3727432918968,21.6223357157349,3.02904773332736,6.12129636864963,8.98579914975201,3.44169550792555,9.51959867190851,11.873470216032,5.19821133958135,7.16843019355737,12.2186645514624,6.47635225796619,7.53379413348319,7.42013106471715,16.0561498545416,10.2661181931454,5.09610479413291,7.11066703153331,5.62876706629157,2.02687892380079,4.04419556011827,8.44960709921044,19.4203412735379,6.23456984072264,18.9099006175088,12.4830846107978,12.6838523490832,9.49552635481522,13.5227013206061,8.41966161908826,2.96633961281249,5.20557684911682,15.0383793831479,19.7355556935839,14.575540218386,11.6370060752453,3.72783522436244,16.3957246326466,17.5935233723302,4.08731288333746,22.7648736561249,17.3971791988088,19.0605340609597,11.9832511523858,27.9075367719362,26.6387226479273,20.5112697826886,35.2887331115856,14.1295870300501,21.2536054618763,16.5998163076016,12.3162900903992,4.54900965180614,5.89237196482127,40.4674577614009,30.117175680785,28.6298786390505,25.7705238499073,23.8808112021161,25.3665166164003,17.8970293909082,12.6764651662118,44.6225745370983,31.0133971475224,26.5686197487563,19.7276159184817,26.4144886764318,15.6713474934975,17.2856994582672,25.0783176191301,16.8531164955176,18.5290493122595,18.4706274607135,20.0911999359437,18.2930326785255,16.7457717158744,19.176323582402,18.2990735525086,15.8895126274,20.2304531932855,19.8522317035718,12.1435956061856,17.2787842409154,13.1333971263276,11.7549773841491,12.4269989311532,11.8557062257167,11.6759584321523,29.2303028504137,21.8157778244083,1.65209391491899,4.49565963328025,32.6331023318908,30.1907673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|EntrezGene=11545
|HGNC=
|UniProt=Q921K2
|association_with_transcript=0bp_to_NM_007415,uc007dwi.1_5end
|description=CAGE_peak_2_at_Parp1_5end
|id=chr1:182499095..182499141,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!9.76e-11!94;UBERON:0003056!1.16e-10!49;UBERON:0000956!7.75e-10!21;UBERON:0001869!7.75e-10!21;UBERON:0000203!7.75e-10!21;UBERON:0002791!1.43e-09!29;UBERON:0003528!1.43e-09!29;UBERON:0001893!1.43e-09!29;UBERON:0002780!1.56e-09!39;UBERON:0001890!1.56e-09!39;UBERON:0006240!1.56e-09!39;UBERON:0003080!3.79e-09!40;UBERON:0002020!9.15e-09!34;UBERON:0007811!9.22e-09!86;UBERON:0000033!4.44e-08!63;UBERON:0002619!6.71e-08!17;UBERON:0001017!7.52e-08!73;UBERON:0005743!7.52e-08!73;UBERON:0002346!2.11e-07!71;UBERON:0003075!2.11e-07!71;UBERON:0007284!2.11e-07!71;UBERON:0002323!2.19e-07!37;UBERON:0004458!2.19e-07!37;UBERON:0000955!5.89e-07!50;UBERON:0006238!5.89e-07!50;UBERON:0000073!6.75e-07!75;UBERON:0001016!6.75e-07!75;UBERON:0001049!6.94e-07!52;UBERON:0005068!6.94e-07!52;UBERON:0006241!6.94e-07!52;UBERON:0007135!6.94e-07!52;UBERON:0002616!8.35e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.16e-10,49;UBERON:0000956,7.75e-10,21;UBERON:0001869,7.75e-10,21;UBERON:0000203,7.75e-10,21;UBERON:0003528,1.43e-09,29;UBERON:0002791,1.43e-09,29;UBERON:0001893,1.43e-09,29;UBERON:0002780,1.56e-09,39;UBERON:0001890,1.56e-09,39;UBERON:0006240,1.56e-09,39;UBERON:0003080,3.79e-09,40;UBERON:0002346,5.86e-09,64;UBERON:0003075,5.86e-09,64;UBERON:0007284,5.86e-09,64;UBERON:0002020,9.15e-09,34;UBERON:0002619,6.71e-08,17;UBERON:0001017,7.52e-08,73;UBERON:0000955,1.11e-07,47;UBERON:0006238,1.11e-07,47;UBERON:0002616,1.57e-07,46;UBERON:0002323,2.19e-07,37;UBERON:0004458,2.19e-07,37;UBERON:0010371,6.24e-07,73;UBERON:0001016,6.75e-07,75;UBERON:0001049,6.94e-07,52;UBERON:0005068,6.94e-07,52;UBERON:0006241,6.94e-07,52;UBERON:0007135,6.94e-07,52
|phase1_expression=20.979498970728,1.04692622291808,0,0.60492842261366,0.500895729946347,4.53274034162102,6.77476657727024,14.0744422551318,12.8117737158017,15.2141942109296,14.8959632356189,15.3162545271046,10.785645985666,9.35398305883272,21.9852442798337,15.5905955890166,16.7894850750755,47.9502491344521,44.1508476210479,31.8292238848523,12.5864069423583,19.9574811913779,22.9855814442263,5.11975752938901,9.86459908588831,0,2.15380998079537,3.01659725760245,3.80046838912748,3.2763916868791,6.20845429834853,15.8757668364908,14.1464901144451,15.8481681015439,8.95440021228951,7.64679368649065,8.77928231928187,0.837063261473815,2.3440060335714,3.66466620781659,1.17646297606203,0,0.971020706062307,5.5394599909254,4.1564541800001,6.79122982998222,5.47673941043627,11.5553332881637,9.44650585758229,14.5822424305713,10.9189408867783,15.8127820801469,51.1736948476096,7.97898356212479,13.779845764841,2.57259436035947,5.73066879877513,3.09403255366465,26.3011399117477,23.2756030879694,19.0149421051854,4.74382344896785,5.33576877666684,6.29929802096979,6.92206453796882,6.3943210345149,4.79360176829448,9.22123932771731,36.8098123695096,37.8016627328734,36.5965432751405,13.139945282575,15.4607978666129,35.3998409731217,46.5808989148629,34.9303138911808,7.70811166995721,14.300981865541,14.1318010595744,24.6627358055462,25.7995154958795,18.2319679694866,10.8881369610539,7.87867654044352,13.4462458043593,12.0797720044204,16.3727432918968,21.6223357157349,3.02904773332736,6.12129636864963,8.98579914975201,3.44169550792555,9.51959867190851,11.873470216032,5.19821133958135,7.16843019355737,12.2186645514624,6.47635225796619,7.53379413348319,7.42013106471715,16.0561498545416,10.2661181931454,5.09610479413291,7.11066703153331,5.62876706629157,2.02687892380079,4.04419556011827,8.44960709921044,19.4203412735379,6.23456984072264,18.9099006175088,12.4830846107978,12.6838523490832,9.49552635481522,13.5227013206061,8.41966161908826,2.96633961281249,5.20557684911682,15.0383793831479,19.7355556935839,14.575540218386,11.6370060752453,3.72783522436244,16.3957246326466,17.5935233723302,4.08731288333746,22.7648736561249,17.3971791988088,19.0605340609597,11.9832511523858,27.9075367719362,26.6387226479273,20.5112697826886,35.2887331115856,14.1295870300501,21.2536054618763,16.5998163076016,12.3162900903992,4.54900965180614,5.89237196482127,40.4674577614009,30.117175680785,28.6298786390505,25.7705238499073,23.8808112021161,25.3665166164003,17.8970293909082,12.6764651662118,44.6225745370983,31.0133971475224,26.5686197487563,19.7276159184817,26.4144886764318,15.6713474934975,17.2856994582672,25.0783176191301,16.8531164955176,18.5290493122595,18.4706274607135,20.0911999359437,18.2930326785255,16.7457717158744,19.176323582402,18.2990735525086,15.8895126274,20.2304531932855,19.8522317035718,12.1435956061856,17.2787842409154,13.1333971263276,11.7549773841491,12.4269989311532,11.8557062257167,11.6759584321523,29.2303028504137,21.8157778244083,1.65209391491899,4.49565963328025,32.6331023318908,30.190767341857,17.1393723558384,10.4875432804138,6.67134131534611,7.41879941838981,6.64340686162316,8.89374355509659,7.79139147280835,7.75930240960488,8.77338392036041,8.08937467788799,4.97117514711797,5.17767310461355,26.3638382324784,30.3901043541879,27.0498565615393,24.8454619971283,19.3952487167626,18.7963997306054,12.4575978134787,8.70899873079653,7.53593893638599,10.1185674415876,6.52195779591728,19.1871871573508,20.8352534819995,17.3143826536337,18.6631311677423,14.7118067448974,10.4396599230382,9.20627639842594,6.97181475132652,12.0807021802756,8.62609239164127,7.07067800570156,12.1694692514679,9.34541848404313,8.61107584905178,7.71909634181387,7.02062122633098,27.2867632949498,25.5855013013981,22.7458414938752,13.3773441524446,8.5428191295326,7.61739650835244,8.39074685788535,12.6108115284953,9.08005227559977,9.24837658213425,6.55453258862952,8.63424909329478,6.07526046042349,12.0633027151418,4.89515115436839,9.34352118736169,7.45029215022778,10.5963389391943,13.1277088983268,12.2951209032507,17.4204939771017,19.2460013843917,18.350620981942,25.4199609324703,19.3564726341567,17.8238939265915,20.6645867475848,27.1223170122179,20.1656541958805,20.1596766752727,19.6006003017302,9.79386587937053,19.5872164033981,17.2660176914791,9.23832688646199,13.2745138339963,27.6769925216679,30.8370028104046,35.8349651536206,28.644283609435,19.0609791725235,14.2135561242522,21.4484900391728,23.1723295950069,24.018793603122,16.8669773719998,16.5016869197099,9.87274856685985,32.2309358316045,29.1057038511198,19.2903331528433,14.1872186913819,15.6964559489822,15.4676079365994,17.9634319977614,5.16277757740163,2.33015277950202,15.4369878638473,8.73897140589844,11.1410454420175,10.434136012571,10.504766272276,8.042904087508,5.24665505933731,9.27126510052548,17.9414424837745,20.6386867963223,21.6677597022563,15.25784501738,21.597687979922,24.0217081866849,22.9470880491705,20.9927178485487,20.868196044468,6.68269432610579,34.9551272907155,21.3485440483191,17.4968652131318,15.6816222010852,15.0670168984863,12.812112906558,10.9929096114697,9.16145796944104,4.14767914533737,14.2908042009993,27.6209539955253,24.9692631893445,23.3296471544508,33.8345067718643,27.381882577279,21.7953401883104,20.1854450470697,29.8168041292646,40.5805662927501,28.0237580158167,21.6022504693399,17.696622755178,23.9215754042394,24.6506297195585,23.1259064900475,20.7670966974278,20.6628608972515,18.5100992260752,20.5288442772662,24.3329144375036,24.3861781295999,19.5602799165471,21.245818001266,20.7817577943112,16.2458894032381,7.02864189207155,15.5390167361845,18.2119128917236,7.72269235274761,12.3641340180602,4.87974436173073,8.05867146775966,6.00231461421384,15.5487352250963,50.827665835536,39.5879703396172,47.5503276154699,27.49650917499,26.0331357512844,33.9927253825365,24.300810008345,30.621841819247,30.3605414019417,33.6544202638683,50.544438273494,37.5083380996969,27.3173769206615,16.2881500435757,23.267061051706,14.7074806760011,14.0015438515018,12.3621034343337,16.3668796891826,14.6564382823003,17.4900716924265,13.2038438970253,14.1398676279522,12.8050304809739,12.4634967633681,18.0991602687568,13.6743504614929,16.0114652984875,13.1867488257058,15.6030855342461,24.3437169193645,18.9899112590491,17.1674056762071,14.3892952466005,16.9396884747595,14.13063951791,15.1830217484401,16.0472523977084,16.0248854338117,17.3954104213899,16.0157274467635,15.2681947682123,16.7784727699573,13.3245683419931,12.5389297137742,12.9901500527732,16.1412809827332,13.3220053509945,9.18183993930448,10.5883881177367,11.8252596166415
|short_description=p2@Parp1
}}

Revision as of 19:56, 13 September 2013

Short description:p2@Parp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Parp1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_007415, uc007dwi.1_5end
EntrezGene:Parp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Parp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F215.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.90
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.79
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A121.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A315.59
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A247.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A444.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A631.83
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H219.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I922.99
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.86
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I23.02
Ileum epithelium, pool1.CNhs13199.10252-104B93.80
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D85.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.16
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.79
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.56
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.45
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A251.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.78
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.73
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C326.30
Mouse Granule cells, donor2.CNhs12357.11731-123E323.28
Mouse Granule cells, donor3.CNhs12108.11636-122C719.01
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C84.79
Mouse Microglia, donor2.CNhs12634.11736-123E89.22
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D536.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F537.80
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D936.60
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.46
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D235.40
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F246.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D634.93
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.23
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.45
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.37
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E121.62
Mouse Schwann, donor1.CNhs12507.11728-123D93.03
Mouse Schwann, donor2.CNhs12573.11746-123F96.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.99
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C811.87
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.42
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.45
accessory axillary lymph node, adult.CNhs10475.1063-29H919.42
adrenal gland, adult.CNhs10508.49-24D76.23
adrenal gland, embryo E14.CNhs11038.406-44C518.91
adrenal gland, embryo E16.CNhs11004.1254-43D612.48
adrenal gland, embryo E17.CNhs11043.1263-45I112.68
adrenal gland, embryo E18.CNhs11026.1262-18F59.50
adrenal gland, neonate N00.CNhs11191.1311-23C113.52
adrenal gland, neonate N25.CNhs11223.1377-27I38.42
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H15.21
bone (os femoris), adult.CNhs10483.56-12G215.04
bone (os femoris), neonate N02.CNhs11227.1985-43F519.74
bone (os femoris), neonate N16.CNhs11225.1525-43A614.58
bone (os femoris), neonate N20.CNhs11195.1350-25C311.64
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B216.40
cerebellum, neonate N30.CNhs11135.1395-42I217.59
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C722.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D117.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D419.06
corpora quadrigemina, adult.CNhs10501.16-22A411.98
corpus striatum, adult.CNhs10487.19-21D827.91
corpus striatum, neonate N00.CNhs11226.630-43F126.64
cortex, adult.CNhs10473.12-14D520.51
cortex, neonate N30.CNhs11107.1392-42F235.29
diencephalon, adult.CNhs10482.20-12F214.13
diencephalon, neonate N30.CNhs11201.1388-42B221.25
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.60
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.32
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C640.47
eyeball, embryo E14.CNhs10521.399-16E230.12
eyeball, embryo E15.CNhs10593.426-16C928.63
eyeball, embryo E17.CNhs11023.1261-18D425.77
eyeball, neonate N00.CNhs11207.633-15C623.88
eyeball, neonate N01.CNhs11140.1532-43E725.37
eyeball, neonate N02.CNhs11205.1551-44G817.90
eyeball, neonate N16.CNhs11188.777-19A212.68
forelimb, embryo E11.CNhs10596.335-25E244.62
forelimb, embryo E12.CNhs10600.359-14H231.01
forelimb, embryo E13.CNhs10589.384-1E226.57
forelimb, embryo E14.CNhs10577.413-26A819.73
forelimb, embryo E15.CNhs11007.437-20E726.41
forelimb, embryo E17.CNhs10598.1517-43C415.67
forelimb, embryo E18.CNhs11008.1520-43B517.29
gonad, embryo E13.CNhs11044.1564-45I625.08
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.85
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D218.53
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D518.47
heart, embryo E11.CNhs10586.331-24E920.09
heart, embryo E12.CNhs11015.353-12F518.29
heart, embryo E13.CNhs11013.376-3I916.75
heart, embryo E14.CNhs10597.403-26D419.18
heart, embryo E15.CNhs11017.431-16C818.30
heart, embryo E16.CNhs11021.457-17C615.89
heart, embryo E17.CNhs11025.479-18E520.23
heart, embryo E18.CNhs11030.1283-20G319.85
heart, neonate N00.CNhs11213.639-21E312.14
heart, neonate N03.CNhs11221.1349-25I217.28
heart, neonate N10.CNhs11118.749-24G113.13
heart, neonate N16.CNhs11209.782-15G111.75
heart, neonate N20.CNhs11127.821-26I612.43
heart, neonate N25.CNhs11196.1351-25D311.86
heart, neonate N30.CNhs11202.1390-42D211.68
hippocampus, adult.CNhs10478.13-16E829.23
hippocampus, neonate N00.CNhs11228.627-43G121.82
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I532.63
intestine, embryo E13.CNhs11010.381-16D530.19
intestine, embryo E15.CNhs10602.976-16D817.14
intestine, embryo E16.CNhs10585.463-22H410.49
intestine, embryo E17.CNhs10582.482-18D36.67
intestine, embryo E18.CNhs10526.1289-20F77.42
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E98.89
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F27.76
intestine, neonate N10.CNhs11098.755-23A58.77
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G15.18
kidney, embryo E14.CNhs10606.411-4I926.36
kidney, embryo E15.CNhs10997.434-16F830.39
kidney, embryo E16.CNhs10584.464-22A527.05
kidney, embryo E17.CNhs11028.483-18I224.85
kidney, embryo E18.CNhs11001.1288-20C719.40
kidney, neonate N00.CNhs11214.646-21G718.80
kidney, neonate N10.CNhs11206.758-6D512.46
kidney, neonate N20.CNhs11113.832-19I18.71
kidney, neonate N25.CNhs11122.1353-25F37.54
kidney, neonate N30.CNhs11203.1385-42H110.12
liver, adult pregnant day01.CNhs10466.508-5B26.52
liver, embryo E12.CNhs10601.355-15F819.19
liver, embryo E13.CNhs10524.378-3H620.84
liver, embryo E14.CNhs10594.409-16E117.31
liver, embryo E15.CNhs10520.433-16D718.66
liver, embryo E16.CNhs10523.462-17F514.71
liver, embryo E17.CNhs10510.481-18A310.44
liver, embryo E18.CNhs10579.499-43G49.21
liver, neonate N00.CNhs11117.641-24F46.97
liver, neonate N03.CNhs11123.1345-25G212.08
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B912.17
liver, neonate N20.CNhs11220.823-25A39.35
liver, neonate N25.CNhs11198.1368-26H18.61
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B17.02
lung, embryo E12.CNhs10522.354-16G227.29
lung, embryo E14.CNhs10604.404-26F825.59
lung, embryo E15.CNhs11020.432-17C522.75
lung, embryo E16.CNhs10998.458-17B613.38
lung, embryo E17.CNhs10605.480-44A68.54
lung, embryo E18.CNhs10583.1287-20I67.62
lung, neonate N00.CNhs11224.640-42C68.39
lung, neonate N06.CNhs11212.683-20E512.61
lung, neonate N07.CNhs11111.715-19A39.08
lung, neonate N10.CNhs11219.750-23E69.25
lung, neonate N20.CNhs11109.822-18A46.55
lung, neonate N25.CNhs11119.1359-25C78.63
lung, neonate N30.CNhs11133.1394-42H26.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B69.34
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C210.60
medulla oblongata, neonate N30.CNhs11200.1396-42A313.13
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C217.42
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.25
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.35
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E325.42
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D719.36
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.82
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D427.12
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D520.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.16
olfactory brain, adult.CNhs10489.18-22I919.60
ovary, adult.CNhs10507.91-2I79.79
ovary, embryo E18.CNhs11040.505-44H719.59
ovary, neonate N00.CNhs11217.1299-22I417.27
oviduct, adult pregnant day01.CNhs10500.988-6G69.24
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F427.68
pancreas, embryo E15.CNhs11042.1556-45F230.84
pancreas, embryo E16.CNhs11003.460-26E535.83
pancreas, embryo E17.CNhs10599.1558-45G328.64
pancreas, embryo E18.CNhs10580.1535-43I719.06
pancreas, neonate N00.CNhs11105.645-26G914.21
pancreas, neonate N01.CNhs11138.1531-43D721.45
pancreas, neonate N02.CNhs11139.1539-43D823.17
pancreas, neonate N16.CNhs11136.787-43B624.02
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G89.87
pituitary gland, embryo E12.CNhs11018.346-16E632.23
pituitary gland, embryo E13.CNhs11009.370-44C729.11
pituitary gland, embryo E14.CNhs11037.398-44A519.29
pituitary gland, embryo E15.CNhs10592.427-16B914.19
pituitary gland, embryo E16.CNhs11036.449-43F615.70
pituitary gland, embryo E17.CNhs11039.1265-44F515.47
pituitary gland, neonate N00.CNhs11190.1308-22E917.96
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F815.44
skin, adult.CNhs10492.30-1C38.74
skin, neonate N00.CNhs11124.650-25G411.14
skin, neonate N03.CNhs11215.662-22H310.43
skin, neonate N06.CNhs11097.693-20I510.50
skin, neonate N10.CNhs11108.762-6C48.04
small intestine, neonate N16.CNhs11114.790-21I15.25
spinal cord, adult.CNhs10505.24-13C99.27
spleen, adult.CNhs10465.25-2G217.94
spleen, embryo E16.CNhs11035.461-43C120.64
spleen, embryo E18.CNhs11011.1271-21F221.67
spleen, neonate N10.CNhs11116.752-24D115.26
spleen, neonate N20.CNhs11112.824-19H121.60
spleen, neonate N25.CNhs11099.1354-25G324.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C622.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.99
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D320.87
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E334.96
stomach, embryo E15.CNhs10603.1252-16G821.35
stomach, embryo E16.CNhs11022.459-17D417.50
stomach, embryo E17.CNhs11006.1035-18D515.68
stomach, embryo E18.CNhs10999.1286-20C615.07
stomach, neonate N03.CNhs11193.1340-24B812.81
stomach, neonate N07.CNhs11210.718-18A910.99
stomach, neonate N25.CNhs11104.1355-25E49.16
stomach, neonate N30.CNhs11134.1386-42I14.15
submandibular gland, adult.CNhs10469.59-29C114.29
testis, adult.CNhs10504.57-7G527.62
testis, embryo E13.CNhs11031.389-23F524.97
testis, embryo E15.CNhs11034.443-27C523.33
testis, embryo E16.CNhs11033.470-26G533.83
testis, embryo E17.CNhs11029.486-18I527.38
testis, embryo E18.CNhs11027.503-18G521.80
testis, neonate N00.CNhs11189.1300-22B720.19
testis, neonate N07.CNhs11222.726-26I429.82
testis, neonate N10.CNhs11204.763-44D940.58
testis, neonate N20.CNhs11110.839-18H328.02
testis, neonate N30.CNhs11130.1391-42E221.60
thymus, adult.CNhs10471.38-12B517.70
thymus, embryo E14.CNhs11041.402-44I423.92
thymus, embryo E15.CNhs11005.430-45I224.65
thymus, embryo E16.CNhs11002.456-26C523.13
thymus, embryo E17.CNhs10581.478-18C120.77
thymus, embryo E18.CNhs10595.1273-19G420.66
thymus, neonate N02.CNhs11181.1541-43F818.51
thymus, neonate N03.CNhs11137.2104-43C720.53
thymus, neonate N06.CNhs11197.681-26C424.33
thymus, neonate N07.CNhs11211.713-19D324.39
thymus, neonate N10.CNhs11194.748-24E419.56
thymus, neonate N20.CNhs11186.820-7A221.25
thymus, neonate N25.CNhs11125.1362-25G720.78
thymus, neonate N30.CNhs11132.1393-42G216.25
tongue, adult.CNhs10499.32-1B47.03
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.54
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F718.21
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.72
urinary bladder, adult.CNhs10481.879-12E412.36
uterus, adult pregnant day19.CNhs10497.590-15F54.88
uterus, adult.CNhs10509.92-27E58.06
vagina, adult.CNhs10502.89-27D56.00
vesicular gland, adult.CNhs10491.51-27F815.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A150.83
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A239.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A347.55
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D727.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.99
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.30
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A730.62
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.65
whole body, embryo E11.CNhs11014.324-5I850.54
whole body, embryo E12.CNhs10587.857-27C937.51
whole body, embryo E13.CNhs10512.372-23H227.32
whole body, embryo E14.5.CNhs10578.420-27D216.29
whole body, embryo E14.CNhs10519.395-14B123.27
whole body, embryo E16.CNhs10514.453-14F214.71
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.49
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.14
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.01
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.17
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.39
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.13
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.02
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G516.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.32
whole body, embryo E17.5.CNhs10513.490-9F912.54
whole body, embryo E17.CNhs10517.475-3I512.99
whole body, embryo E18.CNhs10516.493-3B316.14
whole body, neonate N00.CNhs10525.657-19C213.32
whole body, neonate N01.CNhs10576.659-23C69.18
whole body, neonate N06.CNhs10515.692-21D110.59
whole body, neonate N10.CNhs10518.761-6B411.83





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate1.16e-1049
cerebral cortex7.75e-1021
cerebral hemisphere7.75e-1021
pallium7.75e-1021
brain grey matter1.43e-0929
regional part of telencephalon1.43e-0929
telencephalon1.43e-0929
regional part of forebrain1.56e-0939
forebrain1.56e-0939
future forebrain1.56e-0939
anterior neural tube3.79e-0940
neurectoderm5.86e-0964
neural plate5.86e-0964
presumptive neural plate5.86e-0964
gray matter9.15e-0934
regional part of cerebral cortex6.71e-0817
central nervous system7.52e-0873
brain1.11e-0747
future brain1.11e-0747
regional part of brain1.57e-0746
body cavity2.19e-0737
body cavity or lining2.19e-0737
ecto-epithelium6.24e-0773
nervous system6.75e-0775
neural tube6.94e-0752
neural rod6.94e-0752
future spinal cord6.94e-0752
neural keel6.94e-0752







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